RNA–Protein interactions for RNA: ENST00000547268.1

PRDM4-203, Transcript of PR/SET domain 4, humanhuman

TSL 5

Gene PRDM4, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-203ENST00000547268 NISCHQ9Y2I1 1504 aa50.36■■■■■ 5.65
PRDM4-203ENST00000547268 CCDC180Q9P1Z9 1646 aa44.72■■■■■ 4.75
PRDM4-203ENST00000547268 ABCC9O60706 1549 aa43.89■■■■■ 4.62
PRDM4-203ENST00000547268 RB1CC1Q8TDY2 1594 aa42.15■■■■■ 4.34
PRDM4-203ENST00000547268 NACADO15069 1562 aa42.13■■■■■ 4.33
PRDM4-203ENST00000547268 DCAF8L2P0C7V8 631 aa42.02■■■■■ 4.32
PRDM4-203ENST00000547268 ZCCHC6Q5VYS8 1495 aaKnown RBP41.93■■■■■ 4.3
PRDM4-203ENST00000547268 MYO15BQ96JP2 1530 aa41.91■■■■■ 4.3
PRDM4-203ENST00000547268 DCAF1Q9Y4B6 1507 aa41.69■■■■■ 4.26
PRDM4-203ENST00000547268 UNC13AQ9UPW8 1703 aa41.13■■■■■ 4.17
PRDM4-203ENST00000547268 PABPN1Q86U42 306 aaKnown RBP eCLIP41.03■■■■■ 4.16
PRDM4-203ENST00000547268 BICRAQ9NZM4 1560 aa40.95■■■■■ 4.15
PRDM4-203ENST00000547268 DNAJC5BQ9UF47 199 aa40.93■■■■■ 4.14
PRDM4-203ENST00000547268 SCRIBQ14160 1630 aa40.78■■■■■ 4.12
PRDM4-203ENST00000547268 SHROOM4Q9ULL8 1493 aa40.51■■■■■ 4.08
PRDM4-203ENST00000547268 EIF4G1Q04637 1599 aaKnown RBP39.84■■■■□ 3.97
PRDM4-203ENST00000547268 CC2D2AQ9P2K1 1620 aa39.69■■■■□ 3.94
PRDM4-203ENST00000547268 CECR2Q9BXF3 1484 aa39.47■■■■□ 3.91
PRDM4-203ENST00000547268 SMARCA4P51532 1647 aa39.04■■■■□ 3.84
PRDM4-203ENST00000547268 BAZ1AQ9NRL2 1556 aaPredicted RBP38.99■■■■□ 3.83
PRDM4-203ENST00000547268 NCAPD3P42695 1498 aa38.94■■■■□ 3.82
PRDM4-203ENST00000547268 ATAD2BQ9ULI0 1458 aa38.92■■■■□ 3.82
PRDM4-203ENST00000547268 SMARCA2P51531 1590 aa38.81■■■■□ 3.8
PRDM4-203ENST00000547268 MROH2BQ7Z745 1585 aa38.8■■■■□ 3.8
PRDM4-203ENST00000547268 PEG3Q9GZU2 1588 aa38.73■■■■□ 3.79
PRDM4-203ENST00000547268 HMGXB3Q12766 1538 aa38.68■■■■□ 3.78
PRDM4-203ENST00000547268 BAZ1BQ9UIG0 1483 aaKnown RBP38.54■■■■□ 3.76
PRDM4-203ENST00000547268 RSF1Q96T23 1441 aaPredicted RBP38.36■■■■□ 3.73
PRDM4-203ENST00000547268 WIZO95785 1651 aa38.31■■■■□ 3.72
PRDM4-203ENST00000547268 NESP48681 1621 aa37.98■■■■□ 3.67
PRDM4-203ENST00000547268 TOP2AP11388 1531 aaKnown RBP37.94■■■■□ 3.66
PRDM4-203ENST00000547268 LAMC3Q9Y6N6 1575 aa37.84■■■■□ 3.65
PRDM4-203ENST00000547268 ERCC6Q03468 1493 aa37.79■■■■□ 3.64
PRDM4-203ENST00000547268 CADPSQ9ULU8 1353 aa37.78■■■■□ 3.64
PRDM4-203ENST00000547268 PDS5BQ9NTI5 1447 aa37.61■■■■□ 3.61
PRDM4-203ENST00000547268 CUX2O14529 1486 aa37.56■■■■□ 3.6
PRDM4-203ENST00000547268 CFTRP13569 1480 aa37.54■■■■□ 3.6
PRDM4-203ENST00000547268 CCDC88BA6NC98 1476 aa37.53■■■■□ 3.6
PRDM4-203ENST00000547268 DNAJC5Q9H3Z4 198 aa37.51■■■■□ 3.6
PRDM4-203ENST00000547268 KIF21AQ7Z4S6 1674 aa37.43■■■■□ 3.58
PRDM4-203ENST00000547268 THOC2Q8NI27 1593 aaKnown RBP37.4■■■■□ 3.58
PRDM4-203ENST00000547268 FANCD2Q9BXW9 1451 aa37.31■■■■□ 3.56
PRDM4-203ENST00000547268 CEP164Q9UPV0 1460 aa37.24■■■■□ 3.55
PRDM4-203ENST00000547268 MRC2Q9UBG0 1479 aa37.23■■■■□ 3.55
PRDM4-203ENST00000547268 SUPT5HO00267 1087 aaKnown RBP37.21■■■■□ 3.55
PRDM4-203ENST00000547268 WDR62O43379 1518 aa37.12■■■■□ 3.53
PRDM4-203ENST00000547268 PRDM2Q13029 1718 aa37.06■■■■□ 3.52
PRDM4-203ENST00000547268 URB2Q14146 1524 aaKnown RBP36.96■■■■□ 3.51
PRDM4-203ENST00000547268 TOPBP1Q92547 1522 aa36.71■■■■□ 3.47
PRDM4-203ENST00000547268 ABCC8Q09428 1581 aa36.68■■■■□ 3.46
PRDM4-203ENST00000547268 DNMBPQ6XZF7 1577 aa36.62■■■■□ 3.45
PRDM4-203ENST00000547268 IFT140Q96RY7 1462 aa36.49■■■■□ 3.43
PRDM4-203ENST00000547268 CUX1P39880 1505 aa36.4■■■■□ 3.42
PRDM4-203ENST00000547268 POLA1P09884 1462 aaPredicted RBP36.39■■■■□ 3.42
PRDM4-203ENST00000547268 ZNF608Q9ULD9 1512 aaPredicted RBP36.35■■■■□ 3.41
PRDM4-203ENST00000547268 TARBP1Q13395 1621 aaKnown RBP36.3■■■■□ 3.4
PRDM4-203ENST00000547268 FGD5Q6ZNL6 1462 aa36.27■■■■□ 3.4
PRDM4-203ENST00000547268 SOGA1O94964 1423 aa36.25■■■■□ 3.39
PRDM4-203ENST00000547268 RAD54L2Q9Y4B4 1467 aa36.24■■■■□ 3.39
PRDM4-203ENST00000547268 EIF4G3O43432 1585 aaKnown RBP36.14■■■■□ 3.38
PRDM4-203ENST00000547268 AQRO60306 1485 aaKnown RBP eCLIP36.13■■■■□ 3.374e-6■■■■■ 31
PRDM4-203ENST00000547268 WRNQ14191 1432 aaPredicted RBP eCLIP36.12■■■■□ 3.37
PRDM4-203ENST00000547268 TDRD9Q8NDG6 1382 aaKnown RBP36.05■■■■□ 3.36
PRDM4-203ENST00000547268 TOP2BQ02880 1626 aa36.02■■■■□ 3.36
PRDM4-203ENST00000547268 SYNJ1O43426 1573 aa36.02■■■■□ 3.36
PRDM4-203ENST00000547268 BIVM-ERCC5R4GMW8 1640 aa36■■■■□ 3.35
PRDM4-203ENST00000547268 WDR97A6NE52 1622 aa35.98■■■■□ 3.35
PRDM4-203ENST00000547268 TRIM41Q8WV44 630 aa35.95■■■■□ 3.35
PRDM4-203ENST00000547268 ABCA10Q8WWZ4 1543 aa35.94■■■■□ 3.34
PRDM4-203ENST00000547268 OSCARQ8IYS5 282 aa35.94■■■■□ 3.34
PRDM4-203ENST00000547268 GRIN2BQ13224 1484 aa35.82■■■■□ 3.32
PRDM4-203ENST00000547268 GAPVD1Q14C86 1478 aa35.8■■■■□ 3.32
PRDM4-203ENST00000547268 ABCA5Q8WWZ7 1642 aa35.77■■■■□ 3.32
PRDM4-203ENST00000547268 SNAPC4Q5SXM2 1469 aa35.77■■■■□ 3.32
PRDM4-203ENST00000547268 MAGI1Q96QZ7 1491 aaPredicted RBP35.73■■■■□ 3.31
PRDM4-203ENST00000547268 FBLN2P98095 1184 aa35.65■■■■□ 3.3
PRDM4-203ENST00000547268 CHD1O14646 1710 aa35.64■■■■□ 3.3
PRDM4-203ENST00000547268 PBRM1Q86U86 1689 aa35.62■■■■□ 3.29
PRDM4-203ENST00000547268 SYNJ2O15056 1496 aa35.6■■■■□ 3.29
PRDM4-203ENST00000547268 CHMP7Q8WUX9 453 aaPredicted RBP35.57■■■■□ 3.28
PRDM4-203ENST00000547268 ERICH3Q5RHP9 1530 aa35.49■■■■□ 3.27
PRDM4-203ENST00000547268 ADAMTS12P58397 1594 aa35.42■■■■□ 3.26
PRDM4-203ENST00000547268 FHAD1B1AJZ9 1412 aa35.4■■■■□ 3.26
PRDM4-203ENST00000547268 RIMBP3CA6NJZ7 1639 aa35.38■■■■□ 3.25
PRDM4-203ENST00000547268 RIMBP3BA6NNM3 1639 aa35.38■■■■□ 3.25
PRDM4-203ENST00000547268 RIMBP3Q9UFD9 1639 aa35.38■■■■□ 3.25
PRDM4-203ENST00000547268 CLASP1Q7Z460 1538 aa35.37■■■■□ 3.25
PRDM4-203ENST00000547268 GRIN2AQ12879 1464 aa35.36■■■■□ 3.25
PRDM4-203ENST00000547268 KIF27Q86VH2 1401 aa35.36■■■■□ 3.25
PRDM4-203ENST00000547268 ARHGEF11O15085 1522 aa35.33■■■■□ 3.25
PRDM4-203ENST00000547268 IGF1RP08069 1367 aa35.31■■■■□ 3.24
PRDM4-203ENST00000547268 NUP160Q12769 1436 aa35.25■■■■□ 3.23
PRDM4-203ENST00000547268 CEP170Q5SW79 1584 aa35.17■■■■□ 3.22
PRDM4-203ENST00000547268 CYB5RLQ6IPT4 315 aa35.1■■■■□ 3.21
PRDM4-203ENST00000547268 CUL7Q14999 1698 aa35.08■■■■□ 3.21
PRDM4-203ENST00000547268 ARAP1Q96P48 1450 aa35.07■■■■□ 3.2
PRDM4-203ENST00000547268 CARMIL1Q5VZK9 1371 aa35.05■■■■□ 3.2
PRDM4-203ENST00000547268 RUSC2Q8N2Y8 1516 aa35.05■■■■□ 3.2
PRDM4-203ENST00000547268 SHROOM2Q13796 1616 aa34.95■■■■□ 3.18
PRDM4-203ENST00000547268 ERCC6L2Q5T890 1561 aa34.87■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms