RNA–Protein interactions for RNA: ENST00000307968.11

FNIP1-202, Transcript of folliculin interacting protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene FNIP1, Length 6,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNIP1-202ENST00000307968 NISCHQ9Y2I1 1504 aa12.91□□□□□ -0.34
FNIP1-202ENST00000307968 ABCC9O60706 1549 aa11.62□□□□□ -0.55
FNIP1-202ENST00000307968 CCDC180Q9P1Z9 1646 aa11.54□□□□□ -0.56
FNIP1-202ENST00000307968 DCAF8L2P0C7V8 631 aa11.11□□□□□ -0.63
FNIP1-202ENST00000307968 RB1CC1Q8TDY2 1594 aa11.02□□□□□ -0.65
FNIP1-202ENST00000307968 NACADO15069 1562 aa10.91□□□□□ -0.66
FNIP1-202ENST00000307968 PABPN1Q86U42 306 aaKnown RBP eCLIP10.87□□□□□ -0.67
FNIP1-202ENST00000307968 DNAJC5BQ9UF47 199 aa10.8□□□□□ -0.68
FNIP1-202ENST00000307968 UNC13AQ9UPW8 1703 aa10.75□□□□□ -0.69
FNIP1-202ENST00000307968 ZCCHC6Q5VYS8 1495 aaKnown RBP10.69□□□□□ -0.7
FNIP1-202ENST00000307968 MYO15BQ96JP2 1530 aa10.68□□□□□ -0.7
FNIP1-202ENST00000307968 SCRIBQ14160 1630 aa10.64□□□□□ -0.71
FNIP1-202ENST00000307968 BICRAQ9NZM4 1560 aa10.64□□□□□ -0.71
FNIP1-202ENST00000307968 DCAF1Q9Y4B6 1507 aa10.58□□□□□ -0.72
FNIP1-202ENST00000307968 CC2D2AQ9P2K1 1620 aa10.46□□□□□ -0.74
FNIP1-202ENST00000307968 SHROOM4Q9ULL8 1493 aa10.45□□□□□ -0.74
FNIP1-202ENST00000307968 CECR2Q9BXF3 1484 aa10.43□□□□□ -0.74
FNIP1-202ENST00000307968 EIF4G1Q04637 1599 aaKnown RBP10.41□□□□□ -0.74
FNIP1-202ENST00000307968 SMARCA4P51532 1647 aa10.08□□□□□ -0.8
FNIP1-202ENST00000307968 ERCC6Q03468 1493 aa10.07□□□□□ -0.8
FNIP1-202ENST00000307968 ATAD2BQ9ULI0 1458 aa10.06□□□□□ -0.8
FNIP1-202ENST00000307968 SMARCA2P51531 1590 aa10.05□□□□□ -0.8
FNIP1-202ENST00000307968 NCAPD3P42695 1498 aa10.05□□□□□ -0.8
FNIP1-202ENST00000307968 BAZ1BQ9UIG0 1483 aaKnown RBP10.02□□□□□ -0.81
FNIP1-202ENST00000307968 BAZ1AQ9NRL2 1556 aaPredicted RBP10.02□□□□□ -0.81
FNIP1-202ENST00000307968 HMGXB3Q12766 1538 aa9.99□□□□□ -0.81
FNIP1-202ENST00000307968 MROH2BQ7Z745 1585 aa9.97□□□□□ -0.81
FNIP1-202ENST00000307968 NESP48681 1621 aa9.97□□□□□ -0.81
FNIP1-202ENST00000307968 CUX2O14529 1486 aa9.92□□□□□ -0.82
FNIP1-202ENST00000307968 PEG3Q9GZU2 1588 aa9.9□□□□□ -0.83
FNIP1-202ENST00000307968 WIZO95785 1651 aa9.89□□□□□ -0.83
FNIP1-202ENST00000307968 DNAJC5Q9H3Z4 198 aa9.87□□□□□ -0.83
FNIP1-202ENST00000307968 LAMC3Q9Y6N6 1575 aa9.85□□□□□ -0.83
FNIP1-202ENST00000307968 KIF21AQ7Z4S6 1674 aa9.85□□□□□ -0.83
FNIP1-202ENST00000307968 PDS5BQ9NTI5 1447 aa9.83□□□□□ -0.84
FNIP1-202ENST00000307968 THOC2Q8NI27 1593 aaKnown RBP9.81□□□□□ -0.84
FNIP1-202ENST00000307968 CADPSQ9ULU8 1353 aa9.79□□□□□ -0.84
FNIP1-202ENST00000307968 RSF1Q96T23 1441 aaPredicted RBP9.77□□□□□ -0.85
FNIP1-202ENST00000307968 MRC2Q9UBG0 1479 aa9.75□□□□□ -0.85
FNIP1-202ENST00000307968 TOP2AP11388 1531 aaKnown RBP9.73□□□□□ -0.85
FNIP1-202ENST00000307968 CEP164Q9UPV0 1460 aa9.73□□□□□ -0.85
FNIP1-202ENST00000307968 FANCD2Q9BXW9 1451 aa9.71□□□□□ -0.85
FNIP1-202ENST00000307968 WDR62O43379 1518 aa9.68□□□□□ -0.86
FNIP1-202ENST00000307968 CFTRP13569 1480 aa9.66□□□□□ -0.86
FNIP1-202ENST00000307968 TRIM41Q8WV44 630 aa9.64□□□□□ -0.87
FNIP1-202ENST00000307968 CCDC88BA6NC98 1476 aa9.64□□□□□ -0.87
FNIP1-202ENST00000307968 URB2Q14146 1524 aaKnown RBP9.61□□□□□ -0.87
FNIP1-202ENST00000307968 PRDM2Q13029 1718 aa9.6□□□□□ -0.87
FNIP1-202ENST00000307968 SUPT5HO00267 1087 aaKnown RBP9.54□□□□□ -0.88
FNIP1-202ENST00000307968 OSCARQ8IYS5 282 aa9.54□□□□□ -0.88
FNIP1-202ENST00000307968 TOPBP1Q92547 1522 aa9.51□□□□□ -0.89
FNIP1-202ENST00000307968 IFT140Q96RY7 1462 aa9.51□□□□□ -0.89
FNIP1-202ENST00000307968 ZNF608Q9ULD9 1512 aaPredicted RBP9.5□□□□□ -0.89
FNIP1-202ENST00000307968 FBLN2P98095 1184 aa9.49□□□□□ -0.89
FNIP1-202ENST00000307968 DNMBPQ6XZF7 1577 aa9.48□□□□□ -0.89
FNIP1-202ENST00000307968 ABCC8Q09428 1581 aa9.47□□□□□ -0.89
FNIP1-202ENST00000307968 EIF4G3O43432 1585 aaKnown RBP9.45□□□□□ -0.9
FNIP1-202ENST00000307968 AQRO60306 1485 aaKnown RBP eCLIP9.45□□□□□ -0.92e-7■■■■■ 29
FNIP1-202ENST00000307968 RAD54L2Q9Y4B4 1467 aa9.43□□□□□ -0.9
FNIP1-202ENST00000307968 POLA1P09884 1462 aaPredicted RBP9.42□□□□□ -0.9
FNIP1-202ENST00000307968 SOGA1O94964 1423 aa9.42□□□□□ -0.9
FNIP1-202ENST00000307968 TDRD9Q8NDG6 1382 aaKnown RBP9.4□□□□□ -0.9
FNIP1-202ENST00000307968 TARBP1Q13395 1621 aaKnown RBP9.4□□□□□ -0.9
FNIP1-202ENST00000307968 RIMBP3CA6NJZ7 1639 aa9.39□□□□□ -0.91
FNIP1-202ENST00000307968 RIMBP3BA6NNM3 1639 aa9.39□□□□□ -0.91
FNIP1-202ENST00000307968 RIMBP3Q9UFD9 1639 aa9.39□□□□□ -0.91
FNIP1-202ENST00000307968 CHD1O14646 1710 aa9.39□□□□□ -0.91
FNIP1-202ENST00000307968 FGD5Q6ZNL6 1462 aa9.39□□□□□ -0.91
FNIP1-202ENST00000307968 CUX1P39880 1505 aa9.37□□□□□ -0.91
FNIP1-202ENST00000307968 CHMP7Q8WUX9 453 aaPredicted RBP9.37□□□□□ -0.91
FNIP1-202ENST00000307968 CYB5RLQ6IPT4 315 aa9.36□□□□□ -0.91
FNIP1-202ENST00000307968 SNAPC4Q5SXM2 1469 aa9.36□□□□□ -0.91
FNIP1-202ENST00000307968 ARHGEF11O15085 1522 aa9.34□□□□□ -0.91
FNIP1-202ENST00000307968 TRHP20396 242 aaPredicted RBP9.31□□□□□ -0.92
FNIP1-202ENST00000307968 GRIN2BQ13224 1484 aa9.3□□□□□ -0.92
FNIP1-202ENST00000307968 PBRM1Q86U86 1689 aa9.3□□□□□ -0.92
FNIP1-202ENST00000307968 GAPVD1Q14C86 1478 aa9.29□□□□□ -0.92
FNIP1-202ENST00000307968 WDR97A6NE52 1622 aa9.28□□□□□ -0.92
FNIP1-202ENST00000307968 SYNJ1O43426 1573 aa9.28□□□□□ -0.92
FNIP1-202ENST00000307968 MAGI1Q96QZ7 1491 aaPredicted RBP9.28□□□□□ -0.92
FNIP1-202ENST00000307968 SYNJ2O15056 1496 aa9.26□□□□□ -0.93
FNIP1-202ENST00000307968 WRNQ14191 1432 aaPredicted RBP eCLIP9.26□□□□□ -0.93
FNIP1-202ENST00000307968 ARAP1Q96P48 1450 aa9.25□□□□□ -0.93
FNIP1-202ENST00000307968 ABCA10Q8WWZ4 1543 aa9.24□□□□□ -0.93
FNIP1-202ENST00000307968 ABCA5Q8WWZ7 1642 aa9.23□□□□□ -0.93
FNIP1-202ENST00000307968 CLASP1Q7Z460 1538 aa9.22□□□□□ -0.93
FNIP1-202ENST00000307968 TOP2BQ02880 1626 aa9.22□□□□□ -0.93
FNIP1-202ENST00000307968 BIVM-ERCC5R4GMW8 1640 aa9.21□□□□□ -0.93
FNIP1-202ENST00000307968 ADAMTS12P58397 1594 aa9.18□□□□□ -0.94
FNIP1-202ENST00000307968 GRIN2AQ12879 1464 aa9.18□□□□□ -0.94
FNIP1-202ENST00000307968 CEP170Q5SW79 1584 aa9.16□□□□□ -0.94
FNIP1-202ENST00000307968 FHAD1B1AJZ9 1412 aa9.15□□□□□ -0.94
FNIP1-202ENST00000307968 TTBK1Q5TCY1 1321 aaPredicted RBP9.14□□□□□ -0.95
FNIP1-202ENST00000307968 ERICH3Q5RHP9 1530 aa9.13□□□□□ -0.95
FNIP1-202ENST00000307968 ERCC6L2Q5T890 1561 aa9.13□□□□□ -0.95
FNIP1-202ENST00000307968 NUP160Q12769 1436 aa9.1□□□□□ -0.95
FNIP1-202ENST00000307968 PRG4Q92954 1404 aaPredicted RBP9.1□□□□□ -0.95
FNIP1-202ENST00000307968 JPH4Q96JJ6 628 aa9.08□□□□□ -0.96
FNIP1-202ENST00000307968 KIF27Q86VH2 1401 aa9.08□□□□□ -0.96
FNIP1-202ENST00000307968 SHROOM2Q13796 1616 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms