RNA–Protein interactions for RNA: ENST00000303904.7

COPS6-201, Transcript of COP9 signalosome subunit 6, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COPS6, Length 1,432 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-201ENST00000303904 NISCHQ9Y2I1 1504 aa69■■■■■ 8.64
COPS6-201ENST00000303904 CCDC180Q9P1Z9 1646 aa61.33■■■■■ 7.41
COPS6-201ENST00000303904 ABCC9O60706 1549 aa59.84■■■■■ 7.17
COPS6-201ENST00000303904 RB1CC1Q8TDY2 1594 aa57.71■■■■■ 6.83
COPS6-201ENST00000303904 DCAF8L2P0C7V8 631 aa57.7■■■■■ 6.83
COPS6-201ENST00000303904 NACADO15069 1562 aa57.68■■■■■ 6.82
COPS6-201ENST00000303904 ZCCHC6Q5VYS8 1495 aaKnown RBP57.5■■■■■ 6.79
COPS6-201ENST00000303904 MYO15BQ96JP2 1530 aa57.38■■■■■ 6.78
COPS6-201ENST00000303904 DCAF1Q9Y4B6 1507 aa57.15■■■■■ 6.74
COPS6-201ENST00000303904 UNC13AQ9UPW8 1703 aa56.2■■■■■ 6.59
COPS6-201ENST00000303904 PABPN1Q86U42 306 aaKnown RBP eCLIP55.93■■■■■ 6.54
COPS6-201ENST00000303904 SCRIBQ14160 1630 aa55.91■■■■■ 6.54
COPS6-201ENST00000303904 BICRAQ9NZM4 1560 aa55.78■■■■■ 6.52
COPS6-201ENST00000303904 SHROOM4Q9ULL8 1493 aa55.45■■■■■ 6.47
COPS6-201ENST00000303904 DNAJC5BQ9UF47 199 aa54.67■■■■■ 6.34
COPS6-201ENST00000303904 EIF4G1Q04637 1599 aaKnown RBP54.4■■■■■ 6.3
COPS6-201ENST00000303904 CC2D2AQ9P2K1 1620 aa54.13■■■■■ 6.26
COPS6-201ENST00000303904 CECR2Q9BXF3 1484 aa53.8■■■■■ 6.2
COPS6-201ENST00000303904 BAZ1AQ9NRL2 1556 aaPredicted RBP53.55■■■■■ 6.16
COPS6-201ENST00000303904 SMARCA4P51532 1647 aa53.5■■■■■ 6.16
COPS6-201ENST00000303904 SMARCA2P51531 1590 aa53.23■■■■■ 6.11
COPS6-201ENST00000303904 ATAD2BQ9ULI0 1458 aa53.2■■■■■ 6.11
COPS6-201ENST00000303904 NCAPD3P42695 1498 aa53.18■■■■■ 6.1
COPS6-201ENST00000303904 MROH2BQ7Z745 1585 aa53.11■■■■■ 6.09
COPS6-201ENST00000303904 PEG3Q9GZU2 1588 aa53■■■■■ 6.07
COPS6-201ENST00000303904 HMGXB3Q12766 1538 aa52.94■■■■■ 6.07
COPS6-201ENST00000303904 BAZ1BQ9UIG0 1483 aaKnown RBP52.83■■■■■ 6.05
COPS6-201ENST00000303904 RSF1Q96T23 1441 aaPredicted RBP52.6■■■■■ 6.01
COPS6-201ENST00000303904 WIZO95785 1651 aa52.54■■■■■ 6
COPS6-201ENST00000303904 TOP2AP11388 1531 aaKnown RBP52.08■■■■■ 5.93
COPS6-201ENST00000303904 LAMC3Q9Y6N6 1575 aa51.79■■■■■ 5.88
COPS6-201ENST00000303904 NESP48681 1621 aa51.75■■■■■ 5.87
COPS6-201ENST00000303904 ERCC6Q03468 1493 aa51.7■■■■■ 5.87
COPS6-201ENST00000303904 CADPSQ9ULU8 1353 aa51.65■■■■■ 5.86
COPS6-201ENST00000303904 PDS5BQ9NTI5 1447 aa51.5■■■■■ 5.83
COPS6-201ENST00000303904 CCDC88BA6NC98 1476 aa51.43■■■■■ 5.82
COPS6-201ENST00000303904 SUPT5HO00267 1087 aaKnown RBP51.43■■■■■ 5.82
COPS6-201ENST00000303904 CFTRP13569 1480 aa51.35■■■■■ 5.81
COPS6-201ENST00000303904 KIF21AQ7Z4S6 1674 aa51.16■■■■■ 5.78
COPS6-201ENST00000303904 CUX2O14529 1486 aa51.08■■■■■ 5.77
COPS6-201ENST00000303904 FANCD2Q9BXW9 1451 aa51.05■■■■■ 5.76
COPS6-201ENST00000303904 CEP164Q9UPV0 1460 aa51.01■■■■■ 5.76
COPS6-201ENST00000303904 THOC2Q8NI27 1593 aaKnown RBP50.97■■■■■ 5.75
COPS6-201ENST00000303904 PRDM2Q13029 1718 aa50.94■■■■■ 5.75
COPS6-201ENST00000303904 MRC2Q9UBG0 1479 aa50.89■■■■■ 5.74
COPS6-201ENST00000303904 WDR62O43379 1518 aa50.68■■■■■ 5.7
COPS6-201ENST00000303904 URB2Q14146 1524 aaKnown RBP50.45■■■■■ 5.67
COPS6-201ENST00000303904 ABCC8Q09428 1581 aa50.37■■■■■ 5.65
COPS6-201ENST00000303904 TOPBP1Q92547 1522 aa50.22■■■■■ 5.63
COPS6-201ENST00000303904 DNMBPQ6XZF7 1577 aa50.19■■■■■ 5.63
COPS6-201ENST00000303904 IFT140Q96RY7 1462 aa49.95■■■■■ 5.59
COPS6-201ENST00000303904 CUX1P39880 1505 aa49.83■■■■■ 5.57
COPS6-201ENST00000303904 POLA1P09884 1462 aaPredicted RBP49.8■■■■■ 5.56
COPS6-201ENST00000303904 FGD5Q6ZNL6 1462 aa49.7■■■■■ 5.55
COPS6-201ENST00000303904 WRNQ14191 1432 aaPredicted RBP eCLIP49.67■■■■■ 5.54
COPS6-201ENST00000303904 SOGA1O94964 1423 aa49.66■■■■■ 5.54
COPS6-201ENST00000303904 TARBP1Q13395 1621 aaKnown RBP49.61■■■■■ 5.53
COPS6-201ENST00000303904 ZNF608Q9ULD9 1512 aaPredicted RBP49.57■■■■■ 5.53
COPS6-201ENST00000303904 RAD54L2Q9Y4B4 1467 aa49.53■■■■■ 5.52
COPS6-201ENST00000303904 TOP2BQ02880 1626 aa49.5■■■■■ 5.51
COPS6-201ENST00000303904 BIVM-ERCC5R4GMW8 1640 aa49.47■■■■■ 5.51
COPS6-201ENST00000303904 EIF4G3O43432 1585 aaKnown RBP49.44■■■■■ 5.51
COPS6-201ENST00000303904 SYNJ1O43426 1573 aa49.42■■■■■ 5.5
COPS6-201ENST00000303904 WDR97A6NE52 1622 aa49.39■■■■■ 5.5
COPS6-201ENST00000303904 AQRO60306 1485 aaKnown RBP eCLIP49.35■■■■■ 5.493e-14■■■■■ 70.9
COPS6-201ENST00000303904 DNAJC5Q9H3Z4 198 aa49.32■■■■■ 5.49
COPS6-201ENST00000303904 TDRD9Q8NDG6 1382 aaKnown RBP49.31■■■■■ 5.48
COPS6-201ENST00000303904 ABCA10Q8WWZ4 1543 aa49.25■■■■■ 5.47
COPS6-201ENST00000303904 GRIN2BQ13224 1484 aa49.08■■■■■ 5.45
COPS6-201ENST00000303904 GAPVD1Q14C86 1478 aa49.08■■■■■ 5.45
COPS6-201ENST00000303904 OSCARQ8IYS5 282 aa49.02■■■■■ 5.44
COPS6-201ENST00000303904 ABCA5Q8WWZ7 1642 aa48.99■■■■■ 5.43
COPS6-201ENST00000303904 MAGI1Q96QZ7 1491 aaPredicted RBP48.95■■■■■ 5.43
COPS6-201ENST00000303904 SNAPC4Q5SXM2 1469 aa48.93■■■■■ 5.42
COPS6-201ENST00000303904 PBRM1Q86U86 1689 aa48.89■■■■■ 5.42
COPS6-201ENST00000303904 FBLN2P98095 1184 aa48.86■■■■■ 5.41
COPS6-201ENST00000303904 CHMP7Q8WUX9 453 aaPredicted RBP48.77■■■■■ 5.4
COPS6-201ENST00000303904 CHD1O14646 1710 aa48.75■■■■■ 5.39
COPS6-201ENST00000303904 SYNJ2O15056 1496 aa48.73■■■■■ 5.39
COPS6-201ENST00000303904 ERICH3Q5RHP9 1530 aa48.7■■■■■ 5.39
COPS6-201ENST00000303904 KIF27Q86VH2 1401 aa48.67■■■■■ 5.38
COPS6-201ENST00000303904 TRIM41Q8WV44 630 aa48.65■■■■■ 5.38
COPS6-201ENST00000303904 FHAD1B1AJZ9 1412 aa48.54■■■■■ 5.36
COPS6-201ENST00000303904 ADAMTS12P58397 1594 aa48.53■■■■■ 5.36
COPS6-201ENST00000303904 GRIN2AQ12879 1464 aa48.41■■■■■ 5.34
COPS6-201ENST00000303904 IGF1RP08069 1367 aa48.35■■■■■ 5.33
COPS6-201ENST00000303904 CUL7Q14999 1698 aa48.29■■■■■ 5.32
COPS6-201ENST00000303904 CLASP1Q7Z460 1538 aa48.24■■■■■ 5.31
COPS6-201ENST00000303904 NUP160Q12769 1436 aa48.17■■■■■ 5.3
COPS6-201ENST00000303904 ARHGEF11O15085 1522 aa48.13■■■■■ 5.3
COPS6-201ENST00000303904 CARMIL1Q5VZK9 1371 aa48.13■■■■■ 5.3
COPS6-201ENST00000303904 CEP170Q5SW79 1584 aa48.09■■■■■ 5.29
COPS6-201ENST00000303904 RIMBP3CA6NJZ7 1639 aa48.07■■■■■ 5.29
COPS6-201ENST00000303904 RIMBP3BA6NNM3 1639 aa48.07■■■■■ 5.29
COPS6-201ENST00000303904 RIMBP3Q9UFD9 1639 aa48.07■■■■■ 5.29
COPS6-201ENST00000303904 RUSC2Q8N2Y8 1516 aa48.05■■■■■ 5.28
COPS6-201ENST00000303904 CHIC1Q5VXU3 224 aa48■■■■■ 5.27
COPS6-201ENST00000303904 RAPGEF2Q9Y4G8 1499 aa47.87■■■■■ 5.25
COPS6-201ENST00000303904 EEA1Q15075 1411 aa47.87■■■■■ 5.25
COPS6-201ENST00000303904 KIAA0586Q9BVV6 1533 aa47.79■■■■■ 5.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms