RNA–Protein interactions for RNA: ENST00000413165.5

FLOT1-202, Transcript of flotillin 1, humanhuman

TSL 5

Gene FLOT1, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FLOT1-202ENST00000413165 NISCHQ9Y2I1 1504 aa49.81■■■■■ 5.56
FLOT1-202ENST00000413165 CCDC180Q9P1Z9 1646 aa44.7■■■■■ 4.75
FLOT1-202ENST00000413165 ABCC9O60706 1549 aa44.04■■■■■ 4.64
FLOT1-202ENST00000413165 RB1CC1Q8TDY2 1594 aa42.26■■■■■ 4.36
FLOT1-202ENST00000413165 NACADO15069 1562 aa42.06■■■■■ 4.32
FLOT1-202ENST00000413165 DCAF8L2P0C7V8 631 aa41.71■■■■■ 4.27
FLOT1-202ENST00000413165 MYO15BQ96JP2 1530 aa41.63■■■■■ 4.25
FLOT1-202ENST00000413165 ZCCHC6Q5VYS8 1495 aaKnown RBP41.41■■■■■ 4.22
FLOT1-202ENST00000413165 UNC13AQ9UPW8 1703 aa41.39■■■■■ 4.22
FLOT1-202ENST00000413165 DCAF1Q9Y4B6 1507 aa41.24■■■■■ 4.19
FLOT1-202ENST00000413165 PABPN1Q86U42 306 aaKnown RBP eCLIP40.96■■■■■ 4.152e-17■■□□□ 13.3
FLOT1-202ENST00000413165 BICRAQ9NZM4 1560 aa40.93■■■■■ 4.14
FLOT1-202ENST00000413165 DNAJC5BQ9UF47 199 aa40.75■■■■■ 4.11
FLOT1-202ENST00000413165 SCRIBQ14160 1630 aa40.64■■■■■ 4.1
FLOT1-202ENST00000413165 SHROOM4Q9ULL8 1493 aa40.56■■■■■ 4.08
FLOT1-202ENST00000413165 EIF4G1Q04637 1599 aaKnown RBP39.93■■■■□ 3.98
FLOT1-202ENST00000413165 CC2D2AQ9P2K1 1620 aa39.91■■■■□ 3.98
FLOT1-202ENST00000413165 CECR2Q9BXF3 1484 aa39.66■■■■□ 3.94
FLOT1-202ENST00000413165 SMARCA4P51532 1647 aa38.84■■■■□ 3.81
FLOT1-202ENST00000413165 NCAPD3P42695 1498 aa38.73■■■■□ 3.79
FLOT1-202ENST00000413165 BAZ1AQ9NRL2 1556 aaPredicted RBP38.71■■■■□ 3.79
FLOT1-202ENST00000413165 SMARCA2P51531 1590 aa38.7■■■■□ 3.79
FLOT1-202ENST00000413165 ATAD2BQ9ULI0 1458 aa38.66■■■■□ 3.78
FLOT1-202ENST00000413165 HMGXB3Q12766 1538 aa38.59■■■■□ 3.77
FLOT1-202ENST00000413165 PEG3Q9GZU2 1588 aa38.46■■■■□ 3.75
FLOT1-202ENST00000413165 BAZ1BQ9UIG0 1483 aaKnown RBP38.38■■■■□ 3.73
FLOT1-202ENST00000413165 MROH2BQ7Z745 1585 aa38.36■■■■□ 3.73
FLOT1-202ENST00000413165 ERCC6Q03468 1493 aa38.08■■■■□ 3.69
FLOT1-202ENST00000413165 WIZO95785 1651 aa37.98■■■■□ 3.67
FLOT1-202ENST00000413165 NESP48681 1621 aa37.94■■■■□ 3.66
FLOT1-202ENST00000413165 LAMC3Q9Y6N6 1575 aa37.9■■■■□ 3.66
FLOT1-202ENST00000413165 CUX2O14529 1486 aa37.89■■■■□ 3.66
FLOT1-202ENST00000413165 RSF1Q96T23 1441 aaPredicted RBP37.69■■■■□ 3.62
FLOT1-202ENST00000413165 KIF21AQ7Z4S6 1674 aa37.65■■■■□ 3.62
FLOT1-202ENST00000413165 THOC2Q8NI27 1593 aaKnown RBP37.62■■■■□ 3.61
FLOT1-202ENST00000413165 PDS5BQ9NTI5 1447 aa37.59■■■■□ 3.61
FLOT1-202ENST00000413165 TOP2AP11388 1531 aaKnown RBP37.56■■■■□ 3.6
FLOT1-202ENST00000413165 CADPSQ9ULU8 1353 aa37.55■■■■□ 3.6
FLOT1-202ENST00000413165 MRC2Q9UBG0 1479 aa37.26■■■■□ 3.55
FLOT1-202ENST00000413165 CFTRP13569 1480 aa37.25■■■■□ 3.55
FLOT1-202ENST00000413165 CEP164Q9UPV0 1460 aa37.21■■■■□ 3.55
FLOT1-202ENST00000413165 DNAJC5Q9H3Z4 198 aa37.2■■■■□ 3.55
FLOT1-202ENST00000413165 PRDM2Q13029 1718 aa37.19■■■■□ 3.54
FLOT1-202ENST00000413165 WDR62O43379 1518 aa37.18■■■■□ 3.54
FLOT1-202ENST00000413165 FANCD2Q9BXW9 1451 aa37.17■■■■□ 3.54
FLOT1-202ENST00000413165 CCDC88BA6NC98 1476 aa37.02■■■■□ 3.52
FLOT1-202ENST00000413165 URB2Q14146 1524 aaKnown RBP36.81■■■■□ 3.48
FLOT1-202ENST00000413165 ABCC8Q09428 1581 aa36.53■■■■□ 3.44
FLOT1-202ENST00000413165 TOPBP1Q92547 1522 aa36.52■■■■□ 3.44
FLOT1-202ENST00000413165 DNMBPQ6XZF7 1577 aa36.49■■■■□ 3.43
FLOT1-202ENST00000413165 IFT140Q96RY7 1462 aa36.43■■■■□ 3.42
FLOT1-202ENST00000413165 ZNF608Q9ULD9 1512 aaPredicted RBP36.26■■■■□ 3.4
FLOT1-202ENST00000413165 SUPT5HO00267 1087 aaKnown RBP36.26■■■■□ 3.4
FLOT1-202ENST00000413165 EIF4G3O43432 1585 aaKnown RBP36.22■■■■□ 3.39
FLOT1-202ENST00000413165 TARBP1Q13395 1621 aaKnown RBP36.2■■■■□ 3.39
FLOT1-202ENST00000413165 POLA1P09884 1462 aaPredicted RBP36.17■■■■□ 3.38
FLOT1-202ENST00000413165 OSCARQ8IYS5 282 aa36.1■■■■□ 3.37
FLOT1-202ENST00000413165 CUX1P39880 1505 aa36.03■■■■□ 3.36
FLOT1-202ENST00000413165 FGD5Q6ZNL6 1462 aa36■■■■□ 3.35
FLOT1-202ENST00000413165 WDR97A6NE52 1622 aa35.98■■■■□ 3.35
FLOT1-202ENST00000413165 SOGA1O94964 1423 aa35.96■■■■□ 3.35
FLOT1-202ENST00000413165 AQRO60306 1485 aaKnown RBP eCLIP35.96■■■■□ 3.351e-8■■■■■ 34.6
FLOT1-202ENST00000413165 RAD54L2Q9Y4B4 1467 aa35.96■■■■□ 3.35
FLOT1-202ENST00000413165 CHD1O14646 1710 aa35.91■■■■□ 3.34
FLOT1-202ENST00000413165 TDRD9Q8NDG6 1382 aaKnown RBP35.79■■■■□ 3.32
FLOT1-202ENST00000413165 TRIM41Q8WV44 630 aa35.75■■■■□ 3.31
FLOT1-202ENST00000413165 RIMBP3CA6NJZ7 1639 aa35.71■■■■□ 3.31
FLOT1-202ENST00000413165 RIMBP3BA6NNM3 1639 aa35.71■■■■□ 3.31
FLOT1-202ENST00000413165 RIMBP3Q9UFD9 1639 aa35.71■■■■□ 3.31
FLOT1-202ENST00000413165 PBRM1Q86U86 1689 aa35.7■■■■□ 3.31
FLOT1-202ENST00000413165 BIVM-ERCC5R4GMW8 1640 aa35.69■■■■□ 3.3
FLOT1-202ENST00000413165 SNAPC4Q5SXM2 1469 aa35.69■■■■□ 3.3
FLOT1-202ENST00000413165 GRIN2BQ13224 1484 aa35.67■■■■□ 3.3
FLOT1-202ENST00000413165 MAGI1Q96QZ7 1491 aaPredicted RBP35.67■■■■□ 3.3
FLOT1-202ENST00000413165 TOP2BQ02880 1626 aa35.65■■■■□ 3.3
FLOT1-202ENST00000413165 ABCA10Q8WWZ4 1543 aa35.64■■■■□ 3.3
FLOT1-202ENST00000413165 FBLN2P98095 1184 aa35.63■■■■□ 3.29
FLOT1-202ENST00000413165 ABCA5Q8WWZ7 1642 aa35.61■■■■□ 3.29
FLOT1-202ENST00000413165 ARHGEF11O15085 1522 aa35.61■■■■□ 3.29
FLOT1-202ENST00000413165 WRNQ14191 1432 aaPredicted RBP eCLIP35.6■■■■□ 3.29
FLOT1-202ENST00000413165 GAPVD1Q14C86 1478 aa35.59■■■■□ 3.29
FLOT1-202ENST00000413165 SYNJ1O43426 1573 aa35.57■■■■□ 3.28
FLOT1-202ENST00000413165 SYNJ2O15056 1496 aa35.51■■■■□ 3.28
FLOT1-202ENST00000413165 CHMP7Q8WUX9 453 aaPredicted RBP35.46■■■■□ 3.27
FLOT1-202ENST00000413165 CLASP1Q7Z460 1538 aa35.42■■■■□ 3.26
FLOT1-202ENST00000413165 ADAMTS12P58397 1594 aa35.31■■■■□ 3.24
FLOT1-202ENST00000413165 ARAP1Q96P48 1450 aa35.26■■■■□ 3.23
FLOT1-202ENST00000413165 ERICH3Q5RHP9 1530 aa35.24■■■■□ 3.23
FLOT1-202ENST00000413165 GRIN2AQ12879 1464 aa35.21■■■■□ 3.23
FLOT1-202ENST00000413165 CYB5RLQ6IPT4 315 aa35.19■■■■□ 3.22
FLOT1-202ENST00000413165 FHAD1B1AJZ9 1412 aa35.15■■■■□ 3.22
FLOT1-202ENST00000413165 CEP170Q5SW79 1584 aa35.08■■■■□ 3.21
FLOT1-202ENST00000413165 NUP160Q12769 1436 aa35.06■■■■□ 3.2
FLOT1-202ENST00000413165 SHROOM2Q13796 1616 aa34.94■■■■□ 3.18
FLOT1-202ENST00000413165 KIF27Q86VH2 1401 aa34.9■■■■□ 3.18
FLOT1-202ENST00000413165 CUL7Q14999 1698 aa34.9■■■■□ 3.18
FLOT1-202ENST00000413165 ERCC6L2Q5T890 1561 aa34.83■■■■□ 3.17
FLOT1-202ENST00000413165 RUSC2Q8N2Y8 1516 aa34.81■■■■□ 3.16
FLOT1-202ENST00000413165 IGF1RP08069 1367 aa34.74■■■■□ 3.15
FLOT1-202ENST00000413165 TRHP20396 242 aaPredicted RBP34.69■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms