RNA–Protein interactions for RNA: ENST00000475480.5

TMEM41A-206, Transcript of transmembrane protein 41A, humanhuman

TSL 3

Gene TMEM41A, Length 1,035 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-206ENST00000475480 NISCHQ9Y2I1 1504 aa35.83■■■■□ 3.33
TMEM41A-206ENST00000475480 ABCC9O60706 1549 aa33.76■■■■□ 3
TMEM41A-206ENST00000475480 DNAJC5BQ9UF47 199 aa32.72■■■□□ 2.83
TMEM41A-206ENST00000475480 CCDC180Q9P1Z9 1646 aa32.69■■■□□ 2.82
TMEM41A-206ENST00000475480 RB1CC1Q8TDY2 1594 aa31.63■■■□□ 2.65
TMEM41A-206ENST00000475480 PABPN1Q86U42 306 aaKnown RBP eCLIP31.22■■■□□ 2.59
TMEM41A-206ENST00000475480 NACADO15069 1562 aa31.12■■■□□ 2.57
TMEM41A-206ENST00000475480 UNC13AQ9UPW8 1703 aa31.1■■■□□ 2.57
TMEM41A-206ENST00000475480 BICRAQ9NZM4 1560 aa30.83■■■□□ 2.53
TMEM41A-206ENST00000475480 DNAJC5Q9H3Z4 198 aa30.82■■■□□ 2.52
TMEM41A-206ENST00000475480 DCAF8L2P0C7V8 631 aa30.65■■■□□ 2.5
TMEM41A-206ENST00000475480 CECR2Q9BXF3 1484 aa30.51■■■□□ 2.48
TMEM41A-206ENST00000475480 CC2D2AQ9P2K1 1620 aa30.48■■■□□ 2.47
TMEM41A-206ENST00000475480 MYO15BQ96JP2 1530 aa30.29■■■□□ 2.44
TMEM41A-206ENST00000475480 SHROOM4Q9ULL8 1493 aa30.16■■■□□ 2.42
TMEM41A-206ENST00000475480 EIF4G1Q04637 1599 aaKnown RBP30.11■■■□□ 2.41
TMEM41A-206ENST00000475480 SCRIBQ14160 1630 aa29.71■■■□□ 2.35
TMEM41A-206ENST00000475480 CUX2O14529 1486 aa29.53■■■□□ 2.32
TMEM41A-206ENST00000475480 DCAF1Q9Y4B6 1507 aa29.5■■■□□ 2.31
TMEM41A-206ENST00000475480 ZCCHC6Q5VYS8 1495 aaKnown RBP29.44■■■□□ 2.3
TMEM41A-206ENST00000475480 ERCC6Q03468 1493 aa29.17■■■□□ 2.26
TMEM41A-206ENST00000475480 TRIM41Q8WV44 630 aa28.98■■■□□ 2.23
TMEM41A-206ENST00000475480 NCAPD3P42695 1498 aa28.73■■■□□ 2.19
TMEM41A-206ENST00000475480 NESP48681 1621 aa28.71■■■□□ 2.19
TMEM41A-206ENST00000475480 THOC2Q8NI27 1593 aaKnown RBP28.68■■■□□ 2.18
TMEM41A-206ENST00000475480 ATAD2BQ9ULI0 1458 aa28.5■■■□□ 2.15
TMEM41A-206ENST00000475480 HMGXB3Q12766 1538 aa28.43■■■□□ 2.14
TMEM41A-206ENST00000475480 SMARCA2P51531 1590 aa28.39■■■□□ 2.14
TMEM41A-206ENST00000475480 KIF21AQ7Z4S6 1674 aa28.38■■■□□ 2.13
TMEM41A-206ENST00000475480 LAMC3Q9Y6N6 1575 aa28.29■■■□□ 2.12
TMEM41A-206ENST00000475480 SMARCA4P51532 1647 aa28.22■■■□□ 2.11
TMEM41A-206ENST00000475480 BAZ1AQ9NRL2 1556 aaPredicted RBP28.15■■■□□ 2.1
TMEM41A-206ENST00000475480 BAZ1BQ9UIG0 1483 aaKnown RBP28.14■■■□□ 2.09
TMEM41A-206ENST00000475480 PDS5BQ9NTI5 1447 aa28.1■■■□□ 2.09
TMEM41A-206ENST00000475480 WDR62O43379 1518 aa27.97■■■□□ 2.07
TMEM41A-206ENST00000475480 MRC2Q9UBG0 1479 aa27.97■■■□□ 2.07
TMEM41A-206ENST00000475480 OSCARQ8IYS5 282 aa27.95■■■□□ 2.06
TMEM41A-206ENST00000475480 PEG3Q9GZU2 1588 aa27.94■■■□□ 2.06
TMEM41A-206ENST00000475480 RIMBP3CA6NJZ7 1639 aa27.85■■■□□ 2.05
TMEM41A-206ENST00000475480 RIMBP3BA6NNM3 1639 aa27.85■■■□□ 2.05
TMEM41A-206ENST00000475480 RIMBP3Q9UFD9 1639 aa27.85■■■□□ 2.05
TMEM41A-206ENST00000475480 CADPSQ9ULU8 1353 aa27.78■■■□□ 2.04
TMEM41A-206ENST00000475480 CEP164Q9UPV0 1460 aa27.63■■■□□ 2.01
TMEM41A-206ENST00000475480 MROH2BQ7Z745 1585 aa27.62■■■□□ 2.01
TMEM41A-206ENST00000475480 ARHGEF11O15085 1522 aa27.59■■■□□ 2.01
TMEM41A-206ENST00000475480 FANCD2Q9BXW9 1451 aa27.5■■□□□ 1.99
TMEM41A-206ENST00000475480 AEBP2Q6ZN18 517 aaPredicted RBP27.46■■□□□ 1.99
TMEM41A-206ENST00000475480 TRHP20396 242 aaPredicted RBP27.45■■□□□ 1.98
TMEM41A-206ENST00000475480 CYB5RLQ6IPT4 315 aa27.4■■□□□ 1.98
TMEM41A-206ENST00000475480 URB2Q14146 1524 aaKnown RBP27.38■■□□□ 1.97
TMEM41A-206ENST00000475480 WIZO95785 1651 aa27.28■■□□□ 1.96
TMEM41A-206ENST00000475480 CFTRP13569 1480 aa27.25■■□□□ 1.95
TMEM41A-206ENST00000475480 ARAP1Q96P48 1450 aa27.25■■□□□ 1.95
TMEM41A-206ENST00000475480 ZNF608Q9ULD9 1512 aaPredicted RBP27.23■■□□□ 1.95
TMEM41A-206ENST00000475480 CHD1O14646 1710 aa27.13■■□□□ 1.93
TMEM41A-206ENST00000475480 IFT140Q96RY7 1462 aa27.1■■□□□ 1.93
TMEM41A-206ENST00000475480 EIF4G3O43432 1585 aaKnown RBP27.05■■□□□ 1.92
TMEM41A-206ENST00000475480 PRDM2Q13029 1718 aa27.03■■□□□ 1.92
TMEM41A-206ENST00000475480 RSF1Q96T23 1441 aaPredicted RBP26.99■■□□□ 1.91
TMEM41A-206ENST00000475480 TOPBP1Q92547 1522 aa26.87■■□□□ 1.89
TMEM41A-206ENST00000475480 AQRO60306 1485 aaKnown RBP eCLIP26.82■■□□□ 1.887e-7■■■■■ 33.9
TMEM41A-206ENST00000475480 FBLN2P98095 1184 aa26.81■■□□□ 1.88
TMEM41A-206ENST00000475480 TOP2AP11388 1531 aaKnown RBP26.78■■□□□ 1.88
TMEM41A-206ENST00000475480 TARBP1Q13395 1621 aaKnown RBP26.78■■□□□ 1.88
TMEM41A-206ENST00000475480 CLASP1Q7Z460 1538 aa26.72■■□□□ 1.87
TMEM41A-206ENST00000475480 ABCC8Q09428 1581 aa26.67■■□□□ 1.86
TMEM41A-206ENST00000475480 DNMBPQ6XZF7 1577 aa26.67■■□□□ 1.86
TMEM41A-206ENST00000475480 SYNJ1O43426 1573 aa26.55■■□□□ 1.84
TMEM41A-206ENST00000475480 ILDR1Q86SU0 546 aaPredicted RBP26.53■■□□□ 1.84
TMEM41A-206ENST00000475480 POLA1P09884 1462 aaPredicted RBP26.52■■□□□ 1.84
TMEM41A-206ENST00000475480 SNAPC4Q5SXM2 1469 aa26.5■■□□□ 1.83
TMEM41A-206ENST00000475480 CCDC88BA6NC98 1476 aa26.49■■□□□ 1.83
TMEM41A-206ENST00000475480 GAPVD1Q14C86 1478 aa26.48■■□□□ 1.83
TMEM41A-206ENST00000475480 TDRD9Q8NDG6 1382 aaKnown RBP26.46■■□□□ 1.83
TMEM41A-206ENST00000475480 RAD54L2Q9Y4B4 1467 aa26.45■■□□□ 1.82
TMEM41A-206ENST00000475480 CHMP7Q8WUX9 453 aaPredicted RBP26.41■■□□□ 1.82
TMEM41A-206ENST00000475480 MAGI1Q96QZ7 1491 aaPredicted RBP26.36■■□□□ 1.81
TMEM41A-206ENST00000475480 WDR97A6NE52 1622 aa26.36■■□□□ 1.81
TMEM41A-206ENST00000475480 KIF13AQ9H1H9 1805 aa26.35■■□□□ 1.81
TMEM41A-206ENST00000475480 SOGA1O94964 1423 aa26.34■■□□□ 1.81
TMEM41A-206ENST00000475480 SYNJ2O15056 1496 aa26.3■■□□□ 1.8
TMEM41A-206ENST00000475480 ERCC6L2Q5T890 1561 aa26.26■■□□□ 1.79
TMEM41A-206ENST00000475480 GRIN2BQ13224 1484 aa26.24■■□□□ 1.79
TMEM41A-206ENST00000475480 PBRM1Q86U86 1689 aa26.19■■□□□ 1.78
TMEM41A-206ENST00000475480 FGD5Q6ZNL6 1462 aa26.19■■□□□ 1.78
TMEM41A-206ENST00000475480 KDM4FA0A1W2PPD8 638 aa26.16■■□□□ 1.78
TMEM41A-206ENST00000475480 CEP170Q5SW79 1584 aa26.06■■□□□ 1.76
TMEM41A-206ENST00000475480 CUX1P39880 1505 aa26.01■■□□□ 1.75
TMEM41A-206ENST00000475480 SHROOM2Q13796 1616 aa25.97■■□□□ 1.75
TMEM41A-206ENST00000475480 ABCA5Q8WWZ7 1642 aa25.94■■□□□ 1.74
TMEM41A-206ENST00000475480 GRIN2AQ12879 1464 aa25.93■■□□□ 1.74
TMEM41A-206ENST00000475480 KDM6BO15054 1643 aa25.92■■□□□ 1.74
TMEM41A-206ENST00000475480 ABCC10Q5T3U5 1492 aa25.91■■□□□ 1.74
TMEM41A-206ENST00000475480 FAM69CQ0P6D2 419 aa25.89■■□□□ 1.74
TMEM41A-206ENST00000475480 NUP160Q12769 1436 aa25.88■■□□□ 1.73
TMEM41A-206ENST00000475480 DIP2BQ9P265 1576 aa25.86■■□□□ 1.73
TMEM41A-206ENST00000475480 TSPOAP1O95153 1857 aa25.82■■□□□ 1.72
TMEM41A-206ENST00000475480 ABCA10Q8WWZ4 1543 aa25.81■■□□□ 1.72
TMEM41A-206ENST00000475480 ADAMTS12P58397 1594 aa25.81■■□□□ 1.72
TMEM41A-206ENST00000475480 MAPKBP1O60336 1514 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms