RNA–Protein interactions for RNA: ENST00000421852.5

TMEM41A-203, Transcript of transmembrane protein 41A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM41A, Length 2,827 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-203ENST00000421852 NISCHQ9Y2I1 1504 aa28.13■■■□□ 2.09
TMEM41A-203ENST00000421852 SHROOM4Q9ULL8 1493 aa24.43■■□□□ 1.5
TMEM41A-203ENST00000421852 SUPT5HO00267 1087 aaKnown RBP23.97■■□□□ 1.43
TMEM41A-203ENST00000421852 ZCCHC6Q5VYS8 1495 aaKnown RBP23.78■■□□□ 1.4
TMEM41A-203ENST00000421852 DCAF8L2P0C7V8 631 aa23.74■■□□□ 1.39
TMEM41A-203ENST00000421852 CCDC180Q9P1Z9 1646 aa23.72■■□□□ 1.39
TMEM41A-203ENST00000421852 CHIC1Q5VXU3 224 aa23.18■■□□□ 1.3
TMEM41A-203ENST00000421852 MYO15BQ96JP2 1530 aa23.15■■□□□ 1.3
TMEM41A-203ENST00000421852 DCAF1Q9Y4B6 1507 aa22.88■■□□□ 1.25
TMEM41A-203ENST00000421852 ABCC9O60706 1549 aa22.77■■□□□ 1.24
TMEM41A-203ENST00000421852 LOC105371045A0A1W2PR82 267 aa22.67■■□□□ 1.22
TMEM41A-203ENST00000421852 PCGF6Q9BYE7 350 aa22.67■■□□□ 1.22
TMEM41A-203ENST00000421852 HRCP23327 699 aa22.55■■□□□ 1.2
TMEM41A-203ENST00000421852 SCRIBQ14160 1630 aa22.53■■□□□ 1.2
TMEM41A-203ENST00000421852 RSF1Q96T23 1441 aaPredicted RBP22.38■■□□□ 1.17
TMEM41A-203ENST00000421852 PPARGC1BQ86YN6 1023 aaKnown RBP22.33■■□□□ 1.16
TMEM41A-203ENST00000421852 FAM9AQ8IZU1 332 aaPredicted RBP22.22■■□□□ 1.15
TMEM41A-203ENST00000421852 TRIM41Q8WV44 630 aa22.19■■□□□ 1.14
TMEM41A-203ENST00000421852 EHMT2Q96KQ7 1210 aa22.19■■□□□ 1.14
TMEM41A-203ENST00000421852 RB1CC1Q8TDY2 1594 aa22.18■■□□□ 1.14
TMEM41A-203ENST00000421852 NACADO15069 1562 aa22.16■■□□□ 1.14
TMEM41A-203ENST00000421852 CECR2Q9BXF3 1484 aa22.11■■□□□ 1.13
TMEM41A-203ENST00000421852 TRIM26Q12899 539 aaPredicted RBP22.03■■□□□ 1.12
TMEM41A-203ENST00000421852 MROH2BQ7Z745 1585 aa21.98■■□□□ 1.11
TMEM41A-203ENST00000421852 WIZO95785 1651 aa21.86■■□□□ 1.09
TMEM41A-203ENST00000421852 PABPN1Q86U42 306 aaKnown RBP eCLIP21.64■■□□□ 1.05
TMEM41A-203ENST00000421852 UNC13AQ9UPW8 1703 aa21.59■■□□□ 1.05
TMEM41A-203ENST00000421852 BAZ1AQ9NRL2 1556 aaPredicted RBP21.58■■□□□ 1.04
TMEM41A-203ENST00000421852 ABCC8Q09428 1581 aa21.48■■□□□ 1.03
TMEM41A-203ENST00000421852 EIF4G1Q04637 1599 aaKnown RBP21.45■■□□□ 1.02
TMEM41A-203ENST00000421852 TTBK1Q5TCY1 1321 aaPredicted RBP21.45■■□□□ 1.02
TMEM41A-203ENST00000421852 ZEB1P37275 1124 aaPredicted RBP21.44■■□□□ 1.02
TMEM41A-203ENST00000421852 CCDC88BA6NC98 1476 aa21.43■■□□□ 1.02
TMEM41A-203ENST00000421852 SMARCA4P51532 1647 aa21.4■■□□□ 1.02
TMEM41A-203ENST00000421852 BICRAQ9NZM4 1560 aa21.39■■□□□ 1.01
TMEM41A-203ENST00000421852 TOP2AP11388 1531 aaKnown RBP21.38■■□□□ 1.01
TMEM41A-203ENST00000421852 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.34■■□□□ 1.01
TMEM41A-203ENST00000421852 SMARCA2P51531 1590 aa21.33■■□□□ 1
TMEM41A-203ENST00000421852 SOGA1O94964 1423 aa21.31■■□□□ 1
TMEM41A-203ENST00000421852 RUSC2Q8N2Y8 1516 aa21.23■□□□□ 0.99
TMEM41A-203ENST00000421852 CCER1Q8TC90 406 aaPredicted RBP21.2■□□□□ 0.98
TMEM41A-203ENST00000421852 UBTFP17480 764 aaKnown RBP21.18■□□□□ 0.98
TMEM41A-203ENST00000421852 CEP162Q5TB80 1403 aa21.16■□□□□ 0.98
TMEM41A-203ENST00000421852 CSRNP3Q8WYN3 585 aa21.14■□□□□ 0.97
TMEM41A-203ENST00000421852 TNIKQ9UKE5 1360 aa21.04■□□□□ 0.96
TMEM41A-203ENST00000421852 PELP1Q8IZL8 1130 aaKnown RBP21.03■□□□□ 0.96
TMEM41A-203ENST00000421852 WRNQ14191 1432 aaPredicted RBP eCLIP21.01■□□□□ 0.95
TMEM41A-203ENST00000421852 RANGAP1P46060 587 aaPredicted RBP20.96■□□□□ 0.95
TMEM41A-203ENST00000421852 EEA1Q15075 1411 aa20.93■□□□□ 0.94
TMEM41A-203ENST00000421852 SCAF1Q9H7N4 1312 aaKnown RBP20.92■□□□□ 0.94
TMEM41A-203ENST00000421852 GOLGA3Q08378 1498 aa20.91■□□□□ 0.94
TMEM41A-203ENST00000421852 SYNJ1O43426 1573 aa20.91■□□□□ 0.94
TMEM41A-203ENST00000421852 ATAD2BQ9ULI0 1458 aa20.88■□□□□ 0.93
TMEM41A-203ENST00000421852 PEG3Q9GZU2 1588 aa20.86■□□□□ 0.93
TMEM41A-203ENST00000421852 BAZ1BQ9UIG0 1483 aaKnown RBP20.84■□□□□ 0.93
TMEM41A-203ENST00000421852 HNRNPUL2Q1KMD3 747 aaKnown RBP20.82■□□□□ 0.92
TMEM41A-203ENST00000421852 DIEXFQ68CQ4 756 aaKnown RBP20.79■□□□□ 0.92
TMEM41A-203ENST00000421852 CEP164Q9UPV0 1460 aa20.77■□□□□ 0.91
TMEM41A-203ENST00000421852 CLIP1P30622 1438 aa20.75■□□□□ 0.91
TMEM41A-203ENST00000421852 RAPGEF2Q9Y4G8 1499 aa20.74■□□□□ 0.91
TMEM41A-203ENST00000421852 NEUROD1Q13562 356 aa20.68■□□□□ 0.9
TMEM41A-203ENST00000421852 KIF21BO75037 1637 aa20.67■□□□□ 0.9
TMEM41A-203ENST00000421852 APLP2Q06481 763 aa20.63■□□□□ 0.89
TMEM41A-203ENST00000421852 ACIN1Q9UKV3 1341 aaKnown RBP20.62■□□□□ 0.89
TMEM41A-203ENST00000421852 VPS8Q8N3P4 1428 aa20.61■□□□□ 0.89
TMEM41A-203ENST00000421852 ZNF316A6NFI3 1004 aaPredicted RBP20.56■□□□□ 0.88
TMEM41A-203ENST00000421852 TOP2BQ02880 1626 aa20.54■□□□□ 0.88
TMEM41A-203ENST00000421852 NCAPD3P42695 1498 aa20.52■□□□□ 0.88
TMEM41A-203ENST00000421852 YTHDC1Q96MU7 727 aaKnown RBP20.48■□□□□ 0.87
TMEM41A-203ENST00000421852 GTF3C3Q9Y5Q9 886 aa20.47■□□□□ 0.87
TMEM41A-203ENST00000421852 CC2D2AQ9P2K1 1620 aa20.46■□□□□ 0.87
TMEM41A-203ENST00000421852 KANK4Q5T7N3 995 aaPredicted RBP20.45■□□□□ 0.86
TMEM41A-203ENST00000421852 CUX1P39880 1505 aa20.43■□□□□ 0.86
TMEM41A-203ENST00000421852 CENPBP07199 599 aaPredicted RBP20.42■□□□□ 0.86
TMEM41A-203ENST00000421852 HMGXB3Q12766 1538 aa20.42■□□□□ 0.86
TMEM41A-203ENST00000421852 BIVM-ERCC5R4GMW8 1640 aa20.41■□□□□ 0.86
TMEM41A-203ENST00000421852 PRXQ9BXM0 1461 aa20.4■□□□□ 0.86
TMEM41A-203ENST00000421852 MIER1Q8N108 512 aa20.39■□□□□ 0.85
TMEM41A-203ENST00000421852 ARAP1Q96P48 1450 aa20.38■□□□□ 0.85
TMEM41A-203ENST00000421852 MYT1Q01538 1121 aa20.35■□□□□ 0.85
TMEM41A-203ENST00000421852 KIF27Q86VH2 1401 aa20.32■□□□□ 0.84
TMEM41A-203ENST00000421852 ERICH3Q5RHP9 1530 aa20.31■□□□□ 0.84
TMEM41A-203ENST00000421852 ITGAEP38570 1179 aa20.31■□□□□ 0.84
TMEM41A-203ENST00000421852 CFTRP13569 1480 aa20.28■□□□□ 0.84
TMEM41A-203ENST00000421852 DNAJC5BQ9UF47 199 aa20.26■□□□□ 0.83
TMEM41A-203ENST00000421852 DHX57Q6P158 1386 aaKnown RBP20.23■□□□□ 0.83
TMEM41A-203ENST00000421852 ARHGAP35Q9NRY4 1499 aa20.21■□□□□ 0.83
TMEM41A-203ENST00000421852 CUX2O14529 1486 aa20.19■□□□□ 0.82
TMEM41A-203ENST00000421852 IGF1RP08069 1367 aa20.16■□□□□ 0.82
TMEM41A-203ENST00000421852 P3H3Q8IVL6 736 aa20.14■□□□□ 0.82
TMEM41A-203ENST00000421852 RRBP1Q9P2E9 1410 aaKnown RBP20.11■□□□□ 0.81
TMEM41A-203ENST00000421852 CCNB3Q8WWL7 1395 aa20.1■□□□□ 0.81
TMEM41A-203ENST00000421852 CADPSQ9ULU8 1353 aa20.09■□□□□ 0.81
TMEM41A-203ENST00000421852 ATP1B4Q9UN42 357 aaPredicted RBP20.09■□□□□ 0.81
TMEM41A-203ENST00000421852 CARMIL1Q5VZK9 1371 aa20.07■□□□□ 0.8
TMEM41A-203ENST00000421852 FGD5Q6ZNL6 1462 aa20.07■□□□□ 0.8
TMEM41A-203ENST00000421852 CLSPNQ9HAW4 1339 aa20.03■□□□□ 0.8
TMEM41A-203ENST00000421852 NESP48681 1621 aa20.02■□□□□ 0.8
TMEM41A-203ENST00000421852 FAM50AQ14320 339 aaKnown RBP19.98■□□□□ 0.79
TMEM41A-203ENST00000421852 RAB3GAP2Q9H2M9 1393 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms