RNA–Protein interactions for RNA: ENST00000467520.1

TMEM41A-205, Transcript of transmembrane protein 41A, humanhuman

TSL 4

Gene TMEM41A, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-205ENST00000467520 NISCHQ9Y2I1 1504 aa44.53■■■■■ 4.72
TMEM41A-205ENST00000467520 CCDC180Q9P1Z9 1646 aa39.86■■■■□ 3.97
TMEM41A-205ENST00000467520 ABCC9O60706 1549 aa39.57■■■■□ 3.93
TMEM41A-205ENST00000467520 RB1CC1Q8TDY2 1594 aa37.84■■■■□ 3.65
TMEM41A-205ENST00000467520 NACADO15069 1562 aa37.64■■■■□ 3.62
TMEM41A-205ENST00000467520 DCAF8L2P0C7V8 631 aa37.5■■■■□ 3.59
TMEM41A-205ENST00000467520 MYO15BQ96JP2 1530 aa37.22■■■■□ 3.55
TMEM41A-205ENST00000467520 ZCCHC6Q5VYS8 1495 aaKnown RBP36.95■■■■□ 3.51
TMEM41A-205ENST00000467520 PABPN1Q86U42 306 aaKnown RBP eCLIP36.88■■■■□ 3.49
TMEM41A-205ENST00000467520 UNC13AQ9UPW8 1703 aa36.88■■■■□ 3.49
TMEM41A-205ENST00000467520 DNAJC5BQ9UF47 199 aa36.83■■■■□ 3.49
TMEM41A-205ENST00000467520 DCAF1Q9Y4B6 1507 aa36.83■■■■□ 3.49
TMEM41A-205ENST00000467520 BICRAQ9NZM4 1560 aa36.63■■■■□ 3.45
TMEM41A-205ENST00000467520 SHROOM4Q9ULL8 1493 aa36.3■■■■□ 3.4
TMEM41A-205ENST00000467520 SCRIBQ14160 1630 aa36.3■■■■□ 3.4
TMEM41A-205ENST00000467520 CC2D2AQ9P2K1 1620 aa35.76■■■■□ 3.32
TMEM41A-205ENST00000467520 EIF4G1Q04637 1599 aaKnown RBP35.76■■■■□ 3.31
TMEM41A-205ENST00000467520 CECR2Q9BXF3 1484 aa35.65■■■■□ 3.3
TMEM41A-205ENST00000467520 NCAPD3P42695 1498 aa34.73■■■■□ 3.15
TMEM41A-205ENST00000467520 SMARCA4P51532 1647 aa34.66■■■■□ 3.14
TMEM41A-205ENST00000467520 ATAD2BQ9ULI0 1458 aa34.65■■■■□ 3.14
TMEM41A-205ENST00000467520 SMARCA2P51531 1590 aa34.61■■■■□ 3.13
TMEM41A-205ENST00000467520 BAZ1AQ9NRL2 1556 aaPredicted RBP34.57■■■■□ 3.13
TMEM41A-205ENST00000467520 HMGXB3Q12766 1538 aa34.5■■■■□ 3.11
TMEM41A-205ENST00000467520 BAZ1BQ9UIG0 1483 aaKnown RBP34.35■■■■□ 3.09
TMEM41A-205ENST00000467520 PEG3Q9GZU2 1588 aa34.34■■■■□ 3.09
TMEM41A-205ENST00000467520 MROH2BQ7Z745 1585 aa34.28■■■■□ 3.08
TMEM41A-205ENST00000467520 ERCC6Q03468 1493 aa34.2■■■■□ 3.07
TMEM41A-205ENST00000467520 CUX2O14529 1486 aa34.06■■■■□ 3.04
TMEM41A-205ENST00000467520 NESP48681 1621 aa34.04■■■■□ 3.04
TMEM41A-205ENST00000467520 LAMC3Q9Y6N6 1575 aa33.92■■■■□ 3.02
TMEM41A-205ENST00000467520 WIZO95785 1651 aa33.87■■■■□ 3.01
TMEM41A-205ENST00000467520 PDS5BQ9NTI5 1447 aa33.74■■■□□ 2.99
TMEM41A-205ENST00000467520 DNAJC5Q9H3Z4 198 aa33.7■■■□□ 2.99
TMEM41A-205ENST00000467520 CADPSQ9ULU8 1353 aa33.7■■■□□ 2.98
TMEM41A-205ENST00000467520 RSF1Q96T23 1441 aaPredicted RBP33.69■■■□□ 2.98
TMEM41A-205ENST00000467520 THOC2Q8NI27 1593 aaKnown RBP33.65■■■□□ 2.98
TMEM41A-205ENST00000467520 KIF21AQ7Z4S6 1674 aa33.61■■■□□ 2.97
TMEM41A-205ENST00000467520 TOP2AP11388 1531 aaKnown RBP33.52■■■□□ 2.96
TMEM41A-205ENST00000467520 MRC2Q9UBG0 1479 aa33.4■■■□□ 2.94
TMEM41A-205ENST00000467520 CFTRP13569 1480 aa33.36■■■□□ 2.93
TMEM41A-205ENST00000467520 CEP164Q9UPV0 1460 aa33.33■■■□□ 2.93
TMEM41A-205ENST00000467520 FANCD2Q9BXW9 1451 aa33.31■■■□□ 2.92
TMEM41A-205ENST00000467520 WDR62O43379 1518 aa33.29■■■□□ 2.92
TMEM41A-205ENST00000467520 CCDC88BA6NC98 1476 aa33.12■■■□□ 2.89
TMEM41A-205ENST00000467520 PRDM2Q13029 1718 aa33.02■■■□□ 2.88
TMEM41A-205ENST00000467520 URB2Q14146 1524 aaKnown RBP32.97■■■□□ 2.87
TMEM41A-205ENST00000467520 ABCC8Q09428 1581 aa32.71■■■□□ 2.83
TMEM41A-205ENST00000467520 TOPBP1Q92547 1522 aa32.7■■■□□ 2.83
TMEM41A-205ENST00000467520 IFT140Q96RY7 1462 aa32.67■■■□□ 2.82
TMEM41A-205ENST00000467520 DNMBPQ6XZF7 1577 aa32.61■■■□□ 2.81
TMEM41A-205ENST00000467520 OSCARQ8IYS5 282 aa32.56■■■□□ 2.8
TMEM41A-205ENST00000467520 ZNF608Q9ULD9 1512 aaPredicted RBP32.51■■■□□ 2.8
TMEM41A-205ENST00000467520 SUPT5HO00267 1087 aaKnown RBP32.42■■■□□ 2.78
TMEM41A-205ENST00000467520 EIF4G3O43432 1585 aaKnown RBP32.37■■■□□ 2.77
TMEM41A-205ENST00000467520 POLA1P09884 1462 aaPredicted RBP32.37■■■□□ 2.77
TMEM41A-205ENST00000467520 TARBP1Q13395 1621 aaKnown RBP32.36■■■□□ 2.77
TMEM41A-205ENST00000467520 TRIM41Q8WV44 630 aa32.34■■■□□ 2.77
TMEM41A-205ENST00000467520 AQRO60306 1485 aaKnown RBP eCLIP32.28■■■□□ 2.765e-7■■■■■ 34.2
TMEM41A-205ENST00000467520 SOGA1O94964 1423 aa32.26■■■□□ 2.75
TMEM41A-205ENST00000467520 RAD54L2Q9Y4B4 1467 aa32.23■■■□□ 2.75
TMEM41A-205ENST00000467520 FGD5Q6ZNL6 1462 aa32.21■■■□□ 2.75
TMEM41A-205ENST00000467520 CUX1P39880 1505 aa32.2■■■□□ 2.74
TMEM41A-205ENST00000467520 TDRD9Q8NDG6 1382 aaKnown RBP32.13■■■□□ 2.73
TMEM41A-205ENST00000467520 WDR97A6NE52 1622 aa32.12■■■□□ 2.73
TMEM41A-205ENST00000467520 FBLN2P98095 1184 aa32.07■■■□□ 2.72
TMEM41A-205ENST00000467520 CHD1O14646 1710 aa32.06■■■□□ 2.72
TMEM41A-205ENST00000467520 RIMBP3CA6NJZ7 1639 aa32.04■■■□□ 2.72
TMEM41A-205ENST00000467520 RIMBP3BA6NNM3 1639 aa32.04■■■□□ 2.72
TMEM41A-205ENST00000467520 RIMBP3Q9UFD9 1639 aa32.04■■■□□ 2.72
TMEM41A-205ENST00000467520 ARHGEF11O15085 1522 aa31.98■■■□□ 2.71
TMEM41A-205ENST00000467520 SNAPC4Q5SXM2 1469 aa31.97■■■□□ 2.71
TMEM41A-205ENST00000467520 GRIN2BQ13224 1484 aa31.96■■■□□ 2.71
TMEM41A-205ENST00000467520 MAGI1Q96QZ7 1491 aaPredicted RBP31.94■■■□□ 2.7
TMEM41A-205ENST00000467520 CHMP7Q8WUX9 453 aaPredicted RBP31.89■■■□□ 2.7
TMEM41A-205ENST00000467520 ABCA10Q8WWZ4 1543 aa31.88■■■□□ 2.69
TMEM41A-205ENST00000467520 GAPVD1Q14C86 1478 aa31.87■■■□□ 2.69
TMEM41A-205ENST00000467520 WRNQ14191 1432 aaPredicted RBP eCLIP31.83■■■□□ 2.69
TMEM41A-205ENST00000467520 SYNJ2O15056 1496 aa31.81■■■□□ 2.68
TMEM41A-205ENST00000467520 PBRM1Q86U86 1689 aa31.8■■■□□ 2.68
TMEM41A-205ENST00000467520 SYNJ1O43426 1573 aa31.78■■■□□ 2.68
TMEM41A-205ENST00000467520 TOP2BQ02880 1626 aa31.78■■■□□ 2.68
TMEM41A-205ENST00000467520 ABCA5Q8WWZ7 1642 aa31.78■■■□□ 2.68
TMEM41A-205ENST00000467520 BIVM-ERCC5R4GMW8 1640 aa31.77■■■□□ 2.68
TMEM41A-205ENST00000467520 CYB5RLQ6IPT4 315 aa31.75■■■□□ 2.67
TMEM41A-205ENST00000467520 CLASP1Q7Z460 1538 aa31.72■■■□□ 2.67
TMEM41A-205ENST00000467520 ARAP1Q96P48 1450 aa31.66■■■□□ 2.66
TMEM41A-205ENST00000467520 GRIN2AQ12879 1464 aa31.52■■■□□ 2.64
TMEM41A-205ENST00000467520 ADAMTS12P58397 1594 aa31.52■■■□□ 2.64
TMEM41A-205ENST00000467520 FHAD1B1AJZ9 1412 aa31.49■■■□□ 2.63
TMEM41A-205ENST00000467520 ERICH3Q5RHP9 1530 aa31.49■■■□□ 2.63
TMEM41A-205ENST00000467520 NUP160Q12769 1436 aa31.41■■■□□ 2.62
TMEM41A-205ENST00000467520 CEP170Q5SW79 1584 aa31.36■■■□□ 2.61
TMEM41A-205ENST00000467520 TRHP20396 242 aaPredicted RBP31.34■■■□□ 2.61
TMEM41A-205ENST00000467520 SHROOM2Q13796 1616 aa31.22■■■□□ 2.59
TMEM41A-205ENST00000467520 KIF27Q86VH2 1401 aa31.22■■■□□ 2.59
TMEM41A-205ENST00000467520 ERCC6L2Q5T890 1561 aa31.2■■■□□ 2.58
TMEM41A-205ENST00000467520 IGF1RP08069 1367 aa31.13■■■□□ 2.57
TMEM41A-205ENST00000467520 JPH4Q96JJ6 628 aa31.11■■■□□ 2.57
TMEM41A-205ENST00000467520 PRG4Q92954 1404 aaPredicted RBP31.09■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms