RNA–Protein interactions for RNA: ENST00000382227.7

TMEM41A-202, Transcript of transmembrane protein 41A, humanhuman

TSL 4

Gene TMEM41A, Length 541 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-202ENST00000382227 NISCHQ9Y2I1 1504 aa46.96■■■■■ 5.11
TMEM41A-202ENST00000382227 CCDC180Q9P1Z9 1646 aa42.1■■■■■ 4.33
TMEM41A-202ENST00000382227 ABCC9O60706 1549 aa42.08■■■■■ 4.33
TMEM41A-202ENST00000382227 RB1CC1Q8TDY2 1594 aa40.07■■■■■ 4.01
TMEM41A-202ENST00000382227 NACADO15069 1562 aa39.82■■■■□ 3.97
TMEM41A-202ENST00000382227 DCAF8L2P0C7V8 631 aa39.62■■■■□ 3.93
TMEM41A-202ENST00000382227 DNAJC5BQ9UF47 199 aa39.45■■■■□ 3.91
TMEM41A-202ENST00000382227 MYO15BQ96JP2 1530 aa39.3■■■■□ 3.88
TMEM41A-202ENST00000382227 PABPN1Q86U42 306 aaKnown RBP eCLIP39.19■■■■□ 3.86
TMEM41A-202ENST00000382227 UNC13AQ9UPW8 1703 aa39.11■■■■□ 3.85
TMEM41A-202ENST00000382227 ZCCHC6Q5VYS8 1495 aaKnown RBP38.92■■■■□ 3.82
TMEM41A-202ENST00000382227 BICRAQ9NZM4 1560 aa38.9■■■■□ 3.82
TMEM41A-202ENST00000382227 DCAF1Q9Y4B6 1507 aa38.8■■■■□ 3.8
TMEM41A-202ENST00000382227 SHROOM4Q9ULL8 1493 aa38.41■■■■□ 3.74
TMEM41A-202ENST00000382227 SCRIBQ14160 1630 aa38.36■■■■□ 3.73
TMEM41A-202ENST00000382227 CC2D2AQ9P2K1 1620 aa38.01■■■■□ 3.67
TMEM41A-202ENST00000382227 EIF4G1Q04637 1599 aaKnown RBP37.94■■■■□ 3.66
TMEM41A-202ENST00000382227 CECR2Q9BXF3 1484 aa37.91■■■■□ 3.66
TMEM41A-202ENST00000382227 NCAPD3P42695 1498 aa36.77■■■■□ 3.48
TMEM41A-202ENST00000382227 ATAD2BQ9ULI0 1458 aa36.65■■■■□ 3.46
TMEM41A-202ENST00000382227 SMARCA4P51532 1647 aa36.61■■■■□ 3.45
TMEM41A-202ENST00000382227 SMARCA2P51531 1590 aa36.56■■■■□ 3.44
TMEM41A-202ENST00000382227 HMGXB3Q12766 1538 aa36.49■■■■□ 3.43
TMEM41A-202ENST00000382227 BAZ1AQ9NRL2 1556 aaPredicted RBP36.45■■■■□ 3.43
TMEM41A-202ENST00000382227 ERCC6Q03468 1493 aa36.34■■■■□ 3.41
TMEM41A-202ENST00000382227 BAZ1BQ9UIG0 1483 aaKnown RBP36.3■■■■□ 3.4
TMEM41A-202ENST00000382227 PEG3Q9GZU2 1588 aa36.27■■■■□ 3.4
TMEM41A-202ENST00000382227 CUX2O14529 1486 aa36.26■■■■□ 3.4
TMEM41A-202ENST00000382227 DNAJC5Q9H3Z4 198 aa36.21■■■■□ 3.39
TMEM41A-202ENST00000382227 MROH2BQ7Z745 1585 aa36.18■■■■□ 3.38
TMEM41A-202ENST00000382227 NESP48681 1621 aa36.16■■■■□ 3.38
TMEM41A-202ENST00000382227 LAMC3Q9Y6N6 1575 aa35.92■■■■□ 3.34
TMEM41A-202ENST00000382227 THOC2Q8NI27 1593 aaKnown RBP35.77■■■■□ 3.32
TMEM41A-202ENST00000382227 PDS5BQ9NTI5 1447 aa35.73■■■■□ 3.31
TMEM41A-202ENST00000382227 WIZO95785 1651 aa35.72■■■■□ 3.31
TMEM41A-202ENST00000382227 KIF21AQ7Z4S6 1674 aa35.66■■■■□ 3.3
TMEM41A-202ENST00000382227 CADPSQ9ULU8 1353 aa35.65■■■■□ 3.3
TMEM41A-202ENST00000382227 RSF1Q96T23 1441 aaPredicted RBP35.46■■■■□ 3.27
TMEM41A-202ENST00000382227 MRC2Q9UBG0 1479 aa35.41■■■■□ 3.26
TMEM41A-202ENST00000382227 WDR62O43379 1518 aa35.32■■■■□ 3.24
TMEM41A-202ENST00000382227 TOP2AP11388 1531 aaKnown RBP35.31■■■■□ 3.24
TMEM41A-202ENST00000382227 CEP164Q9UPV0 1460 aa35.27■■■■□ 3.24
TMEM41A-202ENST00000382227 CFTRP13569 1480 aa35.26■■■■□ 3.23
TMEM41A-202ENST00000382227 FANCD2Q9BXW9 1451 aa35.24■■■■□ 3.23
TMEM41A-202ENST00000382227 URB2Q14146 1524 aaKnown RBP34.94■■■■□ 3.18
TMEM41A-202ENST00000382227 CCDC88BA6NC98 1476 aa34.91■■■■□ 3.18
TMEM41A-202ENST00000382227 PRDM2Q13029 1718 aa34.84■■■■□ 3.17
TMEM41A-202ENST00000382227 OSCARQ8IYS5 282 aa34.63■■■■□ 3.13
TMEM41A-202ENST00000382227 TRIM41Q8WV44 630 aa34.62■■■■□ 3.13
TMEM41A-202ENST00000382227 TOPBP1Q92547 1522 aa34.58■■■■□ 3.13
TMEM41A-202ENST00000382227 IFT140Q96RY7 1462 aa34.58■■■■□ 3.13
TMEM41A-202ENST00000382227 ABCC8Q09428 1581 aa34.52■■■■□ 3.12
TMEM41A-202ENST00000382227 ZNF608Q9ULD9 1512 aaPredicted RBP34.5■■■■□ 3.11
TMEM41A-202ENST00000382227 DNMBPQ6XZF7 1577 aa34.45■■■■□ 3.1
TMEM41A-202ENST00000382227 EIF4G3O43432 1585 aaKnown RBP34.31■■■■□ 3.08
TMEM41A-202ENST00000382227 TARBP1Q13395 1621 aaKnown RBP34.26■■■■□ 3.07
TMEM41A-202ENST00000382227 POLA1P09884 1462 aaPredicted RBP34.22■■■■□ 3.07
TMEM41A-202ENST00000382227 AQRO60306 1485 aaKnown RBP eCLIP34.2■■■■□ 3.077e-7■■■■■ 33.9
TMEM41A-202ENST00000382227 RIMBP3CA6NJZ7 1639 aa34.13■■■■□ 3.05
TMEM41A-202ENST00000382227 RIMBP3BA6NNM3 1639 aa34.13■■■■□ 3.05
TMEM41A-202ENST00000382227 RIMBP3Q9UFD9 1639 aa34.13■■■■□ 3.05
TMEM41A-202ENST00000382227 RAD54L2Q9Y4B4 1467 aa34.09■■■■□ 3.05
TMEM41A-202ENST00000382227 SOGA1O94964 1423 aa34.08■■■■□ 3.05
TMEM41A-202ENST00000382227 ARHGEF11O15085 1522 aa34.05■■■■□ 3.04
TMEM41A-202ENST00000382227 CHD1O14646 1710 aa34.01■■■■□ 3.04
TMEM41A-202ENST00000382227 FGD5Q6ZNL6 1462 aa34.01■■■■□ 3.04
TMEM41A-202ENST00000382227 TDRD9Q8NDG6 1382 aaKnown RBP34.01■■■■□ 3.04
TMEM41A-202ENST00000382227 CUX1P39880 1505 aa33.99■■■■□ 3.03
TMEM41A-202ENST00000382227 FBLN2P98095 1184 aa33.98■■■■□ 3.03
TMEM41A-202ENST00000382227 SUPT5HO00267 1087 aaKnown RBP33.92■■■■□ 3.02
TMEM41A-202ENST00000382227 WDR97A6NE52 1622 aa33.92■■■■□ 3.02
TMEM41A-202ENST00000382227 SNAPC4Q5SXM2 1469 aa33.85■■■■□ 3.01
TMEM41A-202ENST00000382227 CYB5RLQ6IPT4 315 aa33.81■■■■□ 3
TMEM41A-202ENST00000382227 GRIN2BQ13224 1484 aa33.78■■■■□ 3
TMEM41A-202ENST00000382227 MAGI1Q96QZ7 1491 aaPredicted RBP33.78■■■■□ 3
TMEM41A-202ENST00000382227 CHMP7Q8WUX9 453 aaPredicted RBP33.74■■■□□ 2.99
TMEM41A-202ENST00000382227 ARAP1Q96P48 1450 aa33.71■■■□□ 2.99
TMEM41A-202ENST00000382227 SYNJ2O15056 1496 aa33.66■■■□□ 2.98
TMEM41A-202ENST00000382227 GAPVD1Q14C86 1478 aa33.66■■■□□ 2.98
TMEM41A-202ENST00000382227 CLASP1Q7Z460 1538 aa33.66■■■□□ 2.98
TMEM41A-202ENST00000382227 SYNJ1O43426 1573 aa33.65■■■□□ 2.98
TMEM41A-202ENST00000382227 ABCA10Q8WWZ4 1543 aa33.64■■■□□ 2.98
TMEM41A-202ENST00000382227 PBRM1Q86U86 1689 aa33.6■■■□□ 2.97
TMEM41A-202ENST00000382227 ABCA5Q8WWZ7 1642 aa33.57■■■□□ 2.97
TMEM41A-202ENST00000382227 WRNQ14191 1432 aaPredicted RBP eCLIP33.53■■■□□ 2.96
TMEM41A-202ENST00000382227 TOP2BQ02880 1626 aa33.46■■■□□ 2.95
TMEM41A-202ENST00000382227 BIVM-ERCC5R4GMW8 1640 aa33.44■■■□□ 2.94
TMEM41A-202ENST00000382227 TRHP20396 242 aaPredicted RBP33.42■■■□□ 2.94
TMEM41A-202ENST00000382227 GRIN2AQ12879 1464 aa33.34■■■□□ 2.93
TMEM41A-202ENST00000382227 ADAMTS12P58397 1594 aa33.31■■■□□ 2.92
TMEM41A-202ENST00000382227 FHAD1B1AJZ9 1412 aa33.25■■■□□ 2.91
TMEM41A-202ENST00000382227 NUP160Q12769 1436 aa33.23■■■□□ 2.91
TMEM41A-202ENST00000382227 ERICH3Q5RHP9 1530 aa33.22■■■□□ 2.91
TMEM41A-202ENST00000382227 CEP170Q5SW79 1584 aa33.21■■■□□ 2.91
TMEM41A-202ENST00000382227 ERCC6L2Q5T890 1561 aa33.13■■■□□ 2.89
TMEM41A-202ENST00000382227 SHROOM2Q13796 1616 aa33.06■■■□□ 2.88
TMEM41A-202ENST00000382227 PRG4Q92954 1404 aaPredicted RBP32.92■■■□□ 2.86
TMEM41A-202ENST00000382227 JPH4Q96JJ6 628 aa32.9■■■□□ 2.86
TMEM41A-202ENST00000382227 RUSC2Q8N2Y8 1516 aa32.84■■■□□ 2.85
TMEM41A-202ENST00000382227 KIF27Q86VH2 1401 aa32.83■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms