RNA–Protein interactions for RNA: ENST00000502379.5

SDHA-202, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 679 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-202ENST00000502379 NISCHQ9Y2I1 1504 aa54.98■■■■■ 6.39
SDHA-202ENST00000502379 CCDC180Q9P1Z9 1646 aa49.06■■■■■ 5.44
SDHA-202ENST00000502379 ABCC9O60706 1549 aa48.88■■■■■ 5.41
SDHA-202ENST00000502379 RB1CC1Q8TDY2 1594 aa46.59■■■■■ 5.05
SDHA-202ENST00000502379 DCAF8L2P0C7V8 631 aa46.37■■■■■ 5.01
SDHA-202ENST00000502379 NACADO15069 1562 aa46.37■■■■■ 5.01
SDHA-202ENST00000502379 MYO15BQ96JP2 1530 aa45.83■■■■■ 4.93
SDHA-202ENST00000502379 DNAJC5BQ9UF47 199 aa45.65■■■■■ 4.9
SDHA-202ENST00000502379 PABPN1Q86U42 306 aaKnown RBP eCLIP45.64■■■■■ 4.9
SDHA-202ENST00000502379 ZCCHC6Q5VYS8 1495 aaKnown RBP45.61■■■■■ 4.89
SDHA-202ENST00000502379 UNC13AQ9UPW8 1703 aa45.52■■■■■ 4.88
SDHA-202ENST00000502379 DCAF1Q9Y4B6 1507 aa45.38■■■■■ 4.86
SDHA-202ENST00000502379 BICRAQ9NZM4 1560 aa45.28■■■■■ 4.84
SDHA-202ENST00000502379 SCRIBQ14160 1630 aa44.83■■■■■ 4.77
SDHA-202ENST00000502379 SHROOM4Q9ULL8 1493 aa44.6■■■■■ 4.73
SDHA-202ENST00000502379 CC2D2AQ9P2K1 1620 aa44.13■■■■■ 4.65
SDHA-202ENST00000502379 EIF4G1Q04637 1599 aaKnown RBP44.11■■■■■ 4.65
SDHA-202ENST00000502379 CECR2Q9BXF3 1484 aa43.97■■■■■ 4.63
SDHA-202ENST00000502379 NCAPD3P42695 1498 aa42.86■■■■■ 4.45
SDHA-202ENST00000502379 ATAD2BQ9ULI0 1458 aa42.78■■■■■ 4.44
SDHA-202ENST00000502379 SMARCA4P51532 1647 aa42.78■■■■■ 4.44
SDHA-202ENST00000502379 SMARCA2P51531 1590 aa42.61■■■■■ 4.41
SDHA-202ENST00000502379 BAZ1AQ9NRL2 1556 aaPredicted RBP42.61■■■■■ 4.41
SDHA-202ENST00000502379 HMGXB3Q12766 1538 aa42.5■■■■■ 4.39
SDHA-202ENST00000502379 MROH2BQ7Z745 1585 aa42.39■■■■■ 4.38
SDHA-202ENST00000502379 BAZ1BQ9UIG0 1483 aaKnown RBP42.36■■■■■ 4.37
SDHA-202ENST00000502379 PEG3Q9GZU2 1588 aa42.35■■■■■ 4.37
SDHA-202ENST00000502379 ERCC6Q03468 1493 aa42.13■■■■■ 4.34
SDHA-202ENST00000502379 NESP48681 1621 aa42.1■■■■■ 4.33
SDHA-202ENST00000502379 CUX2O14529 1486 aa41.91■■■■■ 4.3
SDHA-202ENST00000502379 WIZO95785 1651 aa41.87■■■■■ 4.29
SDHA-202ENST00000502379 LAMC3Q9Y6N6 1575 aa41.76■■■■■ 4.28
SDHA-202ENST00000502379 RSF1Q96T23 1441 aaPredicted RBP41.67■■■■■ 4.26
SDHA-202ENST00000502379 DNAJC5Q9H3Z4 198 aa41.6■■■■■ 4.25
SDHA-202ENST00000502379 CADPSQ9ULU8 1353 aa41.59■■■■■ 4.25
SDHA-202ENST00000502379 PDS5BQ9NTI5 1447 aa41.57■■■■■ 4.25
SDHA-202ENST00000502379 THOC2Q8NI27 1593 aaKnown RBP41.51■■■■■ 4.24
SDHA-202ENST00000502379 KIF21AQ7Z4S6 1674 aa41.47■■■■■ 4.23
SDHA-202ENST00000502379 TOP2AP11388 1531 aaKnown RBP41.34■■■■■ 4.21
SDHA-202ENST00000502379 MRC2Q9UBG0 1479 aa41.17■■■■■ 4.18
SDHA-202ENST00000502379 CFTRP13569 1480 aa41.16■■■■■ 4.18
SDHA-202ENST00000502379 FANCD2Q9BXW9 1451 aa41.09■■■■■ 4.17
SDHA-202ENST00000502379 CEP164Q9UPV0 1460 aa41.07■■■■■ 4.16
SDHA-202ENST00000502379 WDR62O43379 1518 aa41.04■■■■■ 4.16
SDHA-202ENST00000502379 CCDC88BA6NC98 1476 aa40.95■■■■■ 4.15
SDHA-202ENST00000502379 URB2Q14146 1524 aaKnown RBP40.74■■■■■ 4.11
SDHA-202ENST00000502379 PRDM2Q13029 1718 aa40.64■■■■■ 4.1
SDHA-202ENST00000502379 TOPBP1Q92547 1522 aa40.35■■■■■ 4.05
SDHA-202ENST00000502379 IFT140Q96RY7 1462 aa40.26■■■■■ 4.03
SDHA-202ENST00000502379 ABCC8Q09428 1581 aa40.24■■■■■ 4.03
SDHA-202ENST00000502379 ZNF608Q9ULD9 1512 aaPredicted RBP40.21■■■■■ 4.03
SDHA-202ENST00000502379 DNMBPQ6XZF7 1577 aa40.19■■■■■ 4.02
SDHA-202ENST00000502379 SUPT5HO00267 1087 aaKnown RBP40.15■■■■■ 4.02
SDHA-202ENST00000502379 OSCARQ8IYS5 282 aa40.15■■■■■ 4.02
SDHA-202ENST00000502379 POLA1P09884 1462 aaPredicted RBP39.96■■■■□ 3.99
SDHA-202ENST00000502379 TARBP1Q13395 1621 aaKnown RBP39.94■■■■□ 3.99
SDHA-202ENST00000502379 TRIM41Q8WV44 630 aa39.93■■■■□ 3.98
SDHA-202ENST00000502379 EIF4G3O43432 1585 aaKnown RBP39.92■■■■□ 3.98
SDHA-202ENST00000502379 AQRO60306 1485 aaKnown RBP eCLIP39.91■■■■□ 3.985e-7■■■□□ 19.2
SDHA-202ENST00000502379 RAD54L2Q9Y4B4 1467 aa39.86■■■■□ 3.97
SDHA-202ENST00000502379 SOGA1O94964 1423 aa39.82■■■■□ 3.97
SDHA-202ENST00000502379 CUX1P39880 1505 aa39.8■■■■□ 3.96
SDHA-202ENST00000502379 FGD5Q6ZNL6 1462 aa39.76■■■■□ 3.96
SDHA-202ENST00000502379 TDRD9Q8NDG6 1382 aaKnown RBP39.72■■■■□ 3.95
SDHA-202ENST00000502379 FBLN2P98095 1184 aa39.59■■■■□ 3.93
SDHA-202ENST00000502379 CHD1O14646 1710 aa39.54■■■■□ 3.92
SDHA-202ENST00000502379 RIMBP3CA6NJZ7 1639 aa39.51■■■■□ 3.92
SDHA-202ENST00000502379 RIMBP3BA6NNM3 1639 aa39.51■■■■□ 3.92
SDHA-202ENST00000502379 RIMBP3Q9UFD9 1639 aa39.51■■■■□ 3.92
SDHA-202ENST00000502379 WDR97A6NE52 1622 aa39.48■■■■□ 3.91
SDHA-202ENST00000502379 SNAPC4Q5SXM2 1469 aa39.46■■■■□ 3.91
SDHA-202ENST00000502379 ARHGEF11O15085 1522 aa39.44■■■■□ 3.9
SDHA-202ENST00000502379 GRIN2BQ13224 1484 aa39.39■■■■□ 3.9
SDHA-202ENST00000502379 MAGI1Q96QZ7 1491 aaPredicted RBP39.33■■■■□ 3.89
SDHA-202ENST00000502379 CHMP7Q8WUX9 453 aaPredicted RBP39.33■■■■□ 3.89
SDHA-202ENST00000502379 ABCA10Q8WWZ4 1543 aa39.32■■■■□ 3.89
SDHA-202ENST00000502379 GAPVD1Q14C86 1478 aa39.31■■■■□ 3.88
SDHA-202ENST00000502379 WRNQ14191 1432 aaPredicted RBP eCLIP39.26■■■■□ 3.88
SDHA-202ENST00000502379 CYB5RLQ6IPT4 315 aa39.22■■■■□ 3.87
SDHA-202ENST00000502379 SYNJ2O15056 1496 aa39.22■■■■□ 3.87
SDHA-202ENST00000502379 TOP2BQ02880 1626 aa39.21■■■■□ 3.87
SDHA-202ENST00000502379 SYNJ1O43426 1573 aa39.21■■■■□ 3.87
SDHA-202ENST00000502379 ABCA5Q8WWZ7 1642 aa39.2■■■■□ 3.87
SDHA-202ENST00000502379 PBRM1Q86U86 1689 aa39.19■■■■□ 3.86
SDHA-202ENST00000502379 BIVM-ERCC5R4GMW8 1640 aa39.18■■■■□ 3.86
SDHA-202ENST00000502379 CLASP1Q7Z460 1538 aa39.13■■■■□ 3.85
SDHA-202ENST00000502379 ARAP1Q96P48 1450 aa39.1■■■■□ 3.85
SDHA-202ENST00000502379 GRIN2AQ12879 1464 aa38.89■■■■□ 3.82
SDHA-202ENST00000502379 ADAMTS12P58397 1594 aa38.88■■■■□ 3.81
SDHA-202ENST00000502379 FHAD1B1AJZ9 1412 aa38.83■■■■□ 3.81
SDHA-202ENST00000502379 ERICH3Q5RHP9 1530 aa38.81■■■■□ 3.8
SDHA-202ENST00000502379 NUP160Q12769 1436 aa38.75■■■■□ 3.79
SDHA-202ENST00000502379 CEP170Q5SW79 1584 aa38.73■■■■□ 3.79
SDHA-202ENST00000502379 TRHP20396 242 aaPredicted RBP38.64■■■■□ 3.78
SDHA-202ENST00000502379 ERCC6L2Q5T890 1561 aa38.61■■■■□ 3.77
SDHA-202ENST00000502379 IGF1RP08069 1367 aa38.5■■■■□ 3.75
SDHA-202ENST00000502379 SHROOM2Q13796 1616 aa38.49■■■■□ 3.75
SDHA-202ENST00000502379 KIF27Q86VH2 1401 aa38.49■■■■□ 3.75
SDHA-202ENST00000502379 JPH4Q96JJ6 628 aa38.42■■■■□ 3.74
SDHA-202ENST00000502379 PRG4Q92954 1404 aaPredicted RBP38.38■■■■□ 3.73
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms