RNA–Protein interactions for RNA: ENST00000296254.3

TMEM41A-201, Transcript of transmembrane protein 41A, humanhuman

TSL 2 BASIC

Gene TMEM41A, Length 1,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-201ENST00000296254 NISCHQ9Y2I1 1504 aa40.44■■■■■ 4.06
TMEM41A-201ENST00000296254 ABCC9O60706 1549 aa36.41■■■■□ 3.42
TMEM41A-201ENST00000296254 CCDC180Q9P1Z9 1646 aa36.37■■■■□ 3.41
TMEM41A-201ENST00000296254 RB1CC1Q8TDY2 1594 aa34.65■■■■□ 3.14
TMEM41A-201ENST00000296254 NACADO15069 1562 aa34.39■■■■□ 3.1
TMEM41A-201ENST00000296254 DNAJC5BQ9UF47 199 aa34.2■■■■□ 3.07
TMEM41A-201ENST00000296254 DCAF8L2P0C7V8 631 aa34.01■■■■□ 3.03
TMEM41A-201ENST00000296254 MYO15BQ96JP2 1530 aa33.93■■■■□ 3.02
TMEM41A-201ENST00000296254 UNC13AQ9UPW8 1703 aa33.84■■■■□ 3.01
TMEM41A-201ENST00000296254 PABPN1Q86U42 306 aaKnown RBP eCLIP33.83■■■■□ 3.01
TMEM41A-201ENST00000296254 BICRAQ9NZM4 1560 aa33.66■■■□□ 2.98
TMEM41A-201ENST00000296254 ZCCHC6Q5VYS8 1495 aaKnown RBP33.54■■■□□ 2.96
TMEM41A-201ENST00000296254 DCAF1Q9Y4B6 1507 aa33.43■■■□□ 2.94
TMEM41A-201ENST00000296254 SHROOM4Q9ULL8 1493 aa33.25■■■□□ 2.91
TMEM41A-201ENST00000296254 SCRIBQ14160 1630 aa33.1■■■□□ 2.89
TMEM41A-201ENST00000296254 CC2D2AQ9P2K1 1620 aa32.91■■■□□ 2.86
TMEM41A-201ENST00000296254 EIF4G1Q04637 1599 aaKnown RBP32.84■■■□□ 2.85
TMEM41A-201ENST00000296254 CECR2Q9BXF3 1484 aa32.83■■■□□ 2.85
TMEM41A-201ENST00000296254 NCAPD3P42695 1498 aa31.74■■■□□ 2.67
TMEM41A-201ENST00000296254 ATAD2BQ9ULI0 1458 aa31.63■■■□□ 2.65
TMEM41A-201ENST00000296254 SMARCA4P51532 1647 aa31.58■■■□□ 2.65
TMEM41A-201ENST00000296254 SMARCA2P51531 1590 aa31.55■■■□□ 2.64
TMEM41A-201ENST00000296254 HMGXB3Q12766 1538 aa31.54■■■□□ 2.64
TMEM41A-201ENST00000296254 DNAJC5Q9H3Z4 198 aa31.5■■■□□ 2.63
TMEM41A-201ENST00000296254 CUX2O14529 1486 aa31.48■■■□□ 2.63
TMEM41A-201ENST00000296254 ERCC6Q03468 1493 aa31.46■■■□□ 2.63
TMEM41A-201ENST00000296254 BAZ1AQ9NRL2 1556 aaPredicted RBP31.41■■■□□ 2.62
TMEM41A-201ENST00000296254 BAZ1BQ9UIG0 1483 aaKnown RBP31.32■■■□□ 2.6
TMEM41A-201ENST00000296254 PEG3Q9GZU2 1588 aa31.31■■■□□ 2.6
TMEM41A-201ENST00000296254 NESP48681 1621 aa31.26■■■□□ 2.59
TMEM41A-201ENST00000296254 MROH2BQ7Z745 1585 aa31.15■■■□□ 2.58
TMEM41A-201ENST00000296254 LAMC3Q9Y6N6 1575 aa31.05■■■□□ 2.56
TMEM41A-201ENST00000296254 THOC2Q8NI27 1593 aaKnown RBP31.02■■■□□ 2.56
TMEM41A-201ENST00000296254 KIF21AQ7Z4S6 1674 aa30.87■■■□□ 2.53
TMEM41A-201ENST00000296254 PDS5BQ9NTI5 1447 aa30.85■■■□□ 2.53
TMEM41A-201ENST00000296254 WIZO95785 1651 aa30.75■■■□□ 2.51
TMEM41A-201ENST00000296254 CADPSQ9ULU8 1353 aa30.75■■■□□ 2.51
TMEM41A-201ENST00000296254 MRC2Q9UBG0 1479 aa30.62■■■□□ 2.49
TMEM41A-201ENST00000296254 WDR62O43379 1518 aa30.57■■■□□ 2.49
TMEM41A-201ENST00000296254 CEP164Q9UPV0 1460 aa30.47■■■□□ 2.47
TMEM41A-201ENST00000296254 RSF1Q96T23 1441 aaPredicted RBP30.46■■■□□ 2.47
TMEM41A-201ENST00000296254 FANCD2Q9BXW9 1451 aa30.42■■■□□ 2.46
TMEM41A-201ENST00000296254 CFTRP13569 1480 aa30.41■■■□□ 2.46
TMEM41A-201ENST00000296254 TOP2AP11388 1531 aaKnown RBP30.41■■■□□ 2.46
TMEM41A-201ENST00000296254 URB2Q14146 1524 aaKnown RBP30.18■■■□□ 2.42
TMEM41A-201ENST00000296254 PRDM2Q13029 1718 aa30.1■■■□□ 2.41
TMEM41A-201ENST00000296254 TRIM41Q8WV44 630 aa30.04■■■□□ 2.4
TMEM41A-201ENST00000296254 CCDC88BA6NC98 1476 aa30.01■■■□□ 2.4
TMEM41A-201ENST00000296254 OSCARQ8IYS5 282 aa29.92■■■□□ 2.38
TMEM41A-201ENST00000296254 IFT140Q96RY7 1462 aa29.87■■■□□ 2.37
TMEM41A-201ENST00000296254 TOPBP1Q92547 1522 aa29.83■■■□□ 2.37
TMEM41A-201ENST00000296254 ZNF608Q9ULD9 1512 aaPredicted RBP29.82■■■□□ 2.36
TMEM41A-201ENST00000296254 ABCC8Q09428 1581 aa29.75■■■□□ 2.35
TMEM41A-201ENST00000296254 DNMBPQ6XZF7 1577 aa29.73■■■□□ 2.35
TMEM41A-201ENST00000296254 EIF4G3O43432 1585 aaKnown RBP29.69■■■□□ 2.34
TMEM41A-201ENST00000296254 RIMBP3CA6NJZ7 1639 aa29.62■■■□□ 2.33
TMEM41A-201ENST00000296254 RIMBP3BA6NNM3 1639 aa29.62■■■□□ 2.33
TMEM41A-201ENST00000296254 RIMBP3Q9UFD9 1639 aa29.62■■■□□ 2.33
TMEM41A-201ENST00000296254 TARBP1Q13395 1621 aaKnown RBP29.59■■■□□ 2.33
TMEM41A-201ENST00000296254 POLA1P09884 1462 aaPredicted RBP29.54■■■□□ 2.32
TMEM41A-201ENST00000296254 ARHGEF11O15085 1522 aa29.53■■■□□ 2.32
TMEM41A-201ENST00000296254 AQRO60306 1485 aaKnown RBP eCLIP29.5■■■□□ 2.312e-7■■■■■ 34.4
TMEM41A-201ENST00000296254 CHD1O14646 1710 aa29.44■■■□□ 2.3
TMEM41A-201ENST00000296254 RAD54L2Q9Y4B4 1467 aa29.39■■■□□ 2.3
TMEM41A-201ENST00000296254 SOGA1O94964 1423 aa29.34■■■□□ 2.29
TMEM41A-201ENST00000296254 WDR97A6NE52 1622 aa29.32■■■□□ 2.28
TMEM41A-201ENST00000296254 FGD5Q6ZNL6 1462 aa29.32■■■□□ 2.28
TMEM41A-201ENST00000296254 TDRD9Q8NDG6 1382 aaKnown RBP29.29■■■□□ 2.28
TMEM41A-201ENST00000296254 CUX1P39880 1505 aa29.29■■■□□ 2.28
TMEM41A-201ENST00000296254 FBLN2P98095 1184 aa29.26■■■□□ 2.27
TMEM41A-201ENST00000296254 SNAPC4Q5SXM2 1469 aa29.25■■■□□ 2.27
TMEM41A-201ENST00000296254 ARAP1Q96P48 1450 aa29.24■■■□□ 2.27
TMEM41A-201ENST00000296254 CYB5RLQ6IPT4 315 aa29.22■■■□□ 2.27
TMEM41A-201ENST00000296254 MAGI1Q96QZ7 1491 aaPredicted RBP29.18■■■□□ 2.26
TMEM41A-201ENST00000296254 CLASP1Q7Z460 1538 aa29.15■■■□□ 2.26
TMEM41A-201ENST00000296254 GRIN2BQ13224 1484 aa29.14■■■□□ 2.26
TMEM41A-201ENST00000296254 SYNJ1O43426 1573 aa29.09■■■□□ 2.25
TMEM41A-201ENST00000296254 SYNJ2O15056 1496 aa29.07■■■□□ 2.24
TMEM41A-201ENST00000296254 CHMP7Q8WUX9 453 aaPredicted RBP29.06■■■□□ 2.24
TMEM41A-201ENST00000296254 PBRM1Q86U86 1689 aa29.02■■■□□ 2.24
TMEM41A-201ENST00000296254 GAPVD1Q14C86 1478 aa29.01■■■□□ 2.23
TMEM41A-201ENST00000296254 ABCA10Q8WWZ4 1543 aa28.99■■■□□ 2.23
TMEM41A-201ENST00000296254 ABCA5Q8WWZ7 1642 aa28.99■■■□□ 2.23
TMEM41A-201ENST00000296254 SUPT5HO00267 1087 aaKnown RBP28.91■■■□□ 2.22
TMEM41A-201ENST00000296254 TRHP20396 242 aaPredicted RBP28.91■■■□□ 2.22
TMEM41A-201ENST00000296254 WRNQ14191 1432 aaPredicted RBP eCLIP28.83■■■□□ 2.21
TMEM41A-201ENST00000296254 TOP2BQ02880 1626 aa28.8■■■□□ 2.2
TMEM41A-201ENST00000296254 BIVM-ERCC5R4GMW8 1640 aa28.8■■■□□ 2.2
TMEM41A-201ENST00000296254 ADAMTS12P58397 1594 aa28.78■■■□□ 2.2
TMEM41A-201ENST00000296254 GRIN2AQ12879 1464 aa28.78■■■□□ 2.2
TMEM41A-201ENST00000296254 NUP160Q12769 1436 aa28.7■■■□□ 2.19
TMEM41A-201ENST00000296254 CEP170Q5SW79 1584 aa28.69■■■□□ 2.18
TMEM41A-201ENST00000296254 FHAD1B1AJZ9 1412 aa28.65■■■□□ 2.18
TMEM41A-201ENST00000296254 ERCC6L2Q5T890 1561 aa28.65■■■□□ 2.18
TMEM41A-201ENST00000296254 ERICH3Q5RHP9 1530 aa28.64■■■□□ 2.17
TMEM41A-201ENST00000296254 SHROOM2Q13796 1616 aa28.59■■■□□ 2.17
TMEM41A-201ENST00000296254 RUSC2Q8N2Y8 1516 aa28.39■■■□□ 2.14
TMEM41A-201ENST00000296254 PRG4Q92954 1404 aaPredicted RBP28.37■■■□□ 2.13
TMEM41A-201ENST00000296254 JPH4Q96JJ6 628 aa28.31■■■□□ 2.12
TMEM41A-201ENST00000296254 KIF13AQ9H1H9 1805 aa28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms