Protein–RNA interactions for Protein: O60832

DKC1, H/ACA ribonucleoprotein complex subunit 4, humanhuman

Known RBP eCLIP

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1O60832 ARPC1B-207ENST00000431816 581 ntTSL 222.56■■□□□ 1.21e-7■■■■□ 19.3
DKC1O60832 ARPC1B-213ENST00000458033 561 ntTSL 222.56■■□□□ 1.21e-7■■■■□ 19.3
DKC1O60832 APP-215ENST00000474136 1309 ntTSL 1 (best)22.4■■□□□ 1.181e-7■■■■□ 19.3
DKC1O60832 MGAT1-224ENST00000514438 607 ntTSL 422.28■■□□□ 1.161e-7■■■■□ 19.3
DKC1O60832 STX18-AS1-203ENST00000507244 669 ntTSL 220.84■□□□□ 0.935e-11■■■■□ 19.3
DKC1O60832 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.851e-7■■■■□ 19.3
DKC1O60832 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.831e-7■■■■□ 19.3
DKC1O60832 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.821e-7■■■■□ 19.3
DKC1O60832 MGAT1-222ENST00000513431 555 ntTSL 220.1■□□□□ 0.811e-7■■■■□ 19.3
DKC1O60832 STARD13-209ENST00000567873 2037 ntTSL 1 (best)19.87■□□□□ 0.771e-8■■■■□ 19.3
DKC1O60832 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.41■□□□□ 0.71e-7■■■■□ 19.3
DKC1O60832 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.685e-11■■■■□ 19.3
DKC1O60832 SLC7A1-202ENST00000450494 547 ntTSL 219.21■□□□□ 0.671e-7■■■■□ 19.3
DKC1O60832 STX18-AS1-202ENST00000502693 724 ntTSL 319.03■□□□□ 0.645e-11■■■■□ 19.3
DKC1O60832 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.98■□□□□ 0.631e-7■■■■□ 19.3
DKC1O60832 SCARB1-205ENST00000538291 5527 ntTSL 518.92■□□□□ 0.621e-7■■■■□ 19.3
DKC1O60832 STX18-AS1-204ENST00000512438 549 ntTSL 318.89■□□□□ 0.615e-11■■■■□ 19.3
DKC1O60832 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.44■□□□□ 0.541e-7■■■■□ 19.3
DKC1O60832 ARPC1B-202ENST00000414376 572 ntTSL 418.42■□□□□ 0.541e-7■■■■□ 19.3
DKC1O60832 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.531e-7■■■■□ 19.3
DKC1O60832 MGAT1-216ENST00000508702 313 ntTSL 418.12■□□□□ 0.491e-7■■■■□ 19.3
DKC1O60832 MGAT1-217ENST00000510341 553 ntTSL 418.12■□□□□ 0.491e-7■■■■□ 19.3
DKC1O60832 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.481e-7■■■■□ 19.3
DKC1O60832 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.9■□□□□ 0.465e-6■■■■□ 19.3
DKC1O60832 ARPC1B-209ENST00000443222 669 ntTSL 217.41■□□□□ 0.381e-7■■■■□ 19.3
DKC1O60832 AC004922.1-202ENST00000441989 1702 ntTSL 217.35■□□□□ 0.371e-7■■■■□ 19.3
DKC1O60832 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.361e-7■■■■□ 19.3
DKC1O60832 MEGF6-205ENST00000485002 4705 ntTSL 517.04■□□□□ 0.325e-6■■■■□ 19.3
DKC1O60832 APP-211ENST00000462267 667 ntTSL 216.99■□□□□ 0.311e-7■■■■□ 19.3
DKC1O60832 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.31e-7■■■■□ 19.3
DKC1O60832 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.72■□□□□ 0.271e-7■■■■□ 19.3
DKC1O60832 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.221e-7■■■■□ 19.3
DKC1O60832 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.21■□□□□ 0.191e-7■■■■□ 19.3
DKC1O60832 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC15.23■□□□□ 0.035e-11■■■■□ 19.3
DKC1O60832 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.83□□□□□ -0.031e-7■■■■□ 19.3
DKC1O60832 SCARB1-207ENST00000541661 476 ntTSL 514.65□□□□□ -0.061e-7■■■■□ 19.3
DKC1O60832 KIAA1958-202ENST00000374244 2643 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.121e-7■■■■□ 19.3
DKC1O60832 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.151e-7■■■■□ 19.3
DKC1O60832 MGAT1-218ENST00000510962 445 ntTSL 513.85□□□□□ -0.191e-7■■■■□ 19.3
DKC1O60832 SCARB1-204ENST00000535005 1845 ntTSL 1 (best)13.72□□□□□ -0.211e-7■■■■□ 19.3
DKC1O60832 STARD13-202ENST00000336934 5917 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.231e-8■■■■□ 19.3
DKC1O60832 AC008897.3-201ENST00000607296 483 ntBASIC13.47□□□□□ -0.251e-7■■■■□ 19.3
DKC1O60832 AC116050.1-202ENST00000608501 349 ntTSL 513.32□□□□□ -0.281e-7■■■■□ 19.3
DKC1O60832 MGAT1-207ENST00000504385 540 ntTSL 412.55□□□□□ -0.41e-7■■■■□ 19.3
DKC1O60832 APP-201ENST00000346798 3467 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.421e-7■■■■□ 19.3
DKC1O60832 MGAT1-219ENST00000512080 532 ntTSL 512.38□□□□□ -0.431e-7■■■■□ 19.3
DKC1O60832 STARD13-206ENST00000487412 939 ntTSL 1 (best)11.45□□□□□ -0.581e-8■■■■□ 19.3
DKC1O60832 SND1-201ENST00000354725 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.625e-6■■■■□ 19.3
DKC1O60832 AC106869.1-204ENST00000450550 393 ntTSL 511.07□□□□□ -0.645e-11■■■■□ 19.3
DKC1O60832 ELOVL2-201ENST00000354666 3997 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.731e-7■■■■□ 19.3
DKC1O60832 ABCA1-204ENST00000494467 807 ntTSL 310.36□□□□□ -0.755e-11■■■■□ 19.3
DKC1O60832 STARD13-208ENST00000498019 568 ntTSL 310.25□□□□□ -0.771e-8■■■■□ 19.3
DKC1O60832 RAPGEF5-206ENST00000458533 869 ntTSL 510.2□□□□□ -0.781e-7■■■■□ 19.3
DKC1O60832 KIAA1958-201ENST00000337530 11775 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.791e-7■■■■□ 19.3
DKC1O60832 AC116050.1-201ENST00000609777 1194 ntTSL 1 (best) BASIC9.78□□□□□ -0.841e-7■■■■□ 19.3
DKC1O60832 MGAT1-212ENST00000506708 745 ntTSL 29.6□□□□□ -0.871e-7■■■■□ 19.3
DKC1O60832 RAPGEF5-205ENST00000451559 836 ntTSL 59.34□□□□□ -0.911e-7■■■■□ 19.3
DKC1O60832 AC106869.1-205ENST00000413185 1046 ntTSL 49.13□□□□□ -0.955e-11■■■■□ 19.3
DKC1O60832 AC106869.1-203ENST00000419035 1892 ntTSL 2 BASIC9.11□□□□□ -0.955e-11■■■■□ 19.3
DKC1O60832 APP-209ENST00000440126 2846 ntTSL 2 BASIC8.42□□□□□ -1.061e-7■■■■□ 19.3
DKC1O60832 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC8.41□□□□□ -1.065e-11■■■■□ 19.3
DKC1O60832 APP-214ENST00000466453 374 ntTSL 38.34□□□□□ -1.071e-7■■■■□ 19.3
DKC1O60832 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC8.25□□□□□ -1.091e-7■■■■□ 19.3
DKC1O60832 APP-206ENST00000359726 3294 ntTSL 2 BASIC7.79□□□□□ -1.161e-7■■■■□ 19.3
DKC1O60832 MGAT1-225ENST00000514760 613 ntTSL 37.78□□□□□ -1.161e-7■■■■□ 19.3
DKC1O60832 MGAT1-221ENST00000513149 356 ntTSL 47.75□□□□□ -1.171e-7■■■■□ 19.3
DKC1O60832 MICU3-204ENST00000519044 1130 ntAPPRIS ALT2 TSL 55.55□□□□□ -1.521e-7■■■■□ 19.3
DKC1O60832 MGAT1-215ENST00000508090 475 ntTSL 45.42□□□□□ -1.541e-7■■■■□ 19.3
DKC1O60832 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC32.18■■■□□ 2.741e-323■■■■□ 19.3
DKC1O60832 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC32.18■■■□□ 2.741e-323■■■■□ 19.3
DKC1O60832 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.021e-323■■■■□ 19.3
DKC1O60832 SNORA37-201ENST00000384504 129 ntBASIC4.49□□□□□ -1.691e-323■■■■□ 19.3
DKC1O60832 SNORD116-11-201ENST00000383882 92 ntBASIC1.82□□□□□ -2.126e-16■■■■□ 19.3
DKC1O60832 SPRY4-205ENST00000511815 553 ntTSL 422.96■■□□□ 1.274e-11■■■■□ 19.3
DKC1O60832 SPRY4-203ENST00000503582 575 ntTSL 419.86■□□□□ 0.774e-11■■■■□ 19.3
DKC1O60832 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.174e-11■■■■□ 19.3
DKC1O60832 SPRY4-201ENST00000344120 4938 ntTSL 1 (best) BASIC13.67□□□□□ -0.224e-11■■■■□ 19.3
DKC1O60832 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.88■□□□□ 0.774e-7■■■■□ 19.3
DKC1O60832 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.23■□□□□ 0.354e-7■■■■□ 19.3
DKC1O60832 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.254e-7■■■■□ 19.3
DKC1O60832 AXIN2-209ENST00000618960 4060 ntTSL 5 BASIC15.07■□□□□ 04e-7■■■■□ 19.3
DKC1O60832 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.185e-13■■■□□ 19.2
DKC1O60832 WDR4-207ENST00000492742 2205 ntTSL 221.61■■□□□ 1.055e-13■■■□□ 19.2
DKC1O60832 WDR4-205ENST00000476326 1977 ntTSL 1 (best)15.82■□□□□ 0.125e-13■■■□□ 19.2
DKC1O60832 USP32-208ENST00000589335 691 ntTSL 522.3■■□□□ 1.161e-323■■■□□ 19.2
DKC1O60832 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.831e-323■■■□□ 19.2
DKC1O60832 SCARNA20-201ENST00000516768 131 ntBASIC12.52□□□□□ -0.411e-323■■■□□ 19.2
DKC1O60832 USP32-211ENST00000590133 2563 ntTSL 211.66□□□□□ -0.541e-323■■■□□ 19.2
DKC1O60832 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC7.45□□□□□ -1.221e-323■■■□□ 19.2
DKC1O60832 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.583e-6■■■□□ 19.2
DKC1O60832 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.513e-6■■■□□ 19.2
DKC1O60832 KDM1A-203ENST00000465864 568 ntTSL 59.21□□□□□ -0.943e-6■■■□□ 19.2
DKC1O60832 CUL4A-205ENST00000463426 893 ntTSL 329.41■■■□□ 2.32e-6■■■□□ 19.1
DKC1O60832 CUL4A-211ENST00000498562 790 ntTSL 328.99■■■□□ 2.232e-6■■■□□ 19.1
DKC1O60832 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.172e-6■■■□□ 19.1
DKC1O60832 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC25.95■■□□□ 1.742e-6■■■□□ 19.1
DKC1O60832 CUL4A-210ENST00000494985 292 ntTSL 525.77■■□□□ 1.722e-6■■■□□ 19.1
DKC1O60832 CUL4A-208ENST00000474116 866 ntTSL 219.4■□□□□ 0.72e-6■■■□□ 19.1
DKC1O60832 CUL4A-204ENST00000451881 3724 ntTSL 5 BASIC14.68□□□□□ -0.062e-6■■■□□ 19.1
DKC1O60832 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC14.05□□□□□ -0.162e-6■■■□□ 19.1
Retrieved 100 of 8,567 protein–RNA pairs in 70.1 ms