RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 NISCHQ9Y2I1 1504 aa26.95■■□□□ 1.91
SCARNA20-201ENST00000516768 CCDC180Q9P1Z9 1646 aa23.84■■□□□ 1.41
SCARNA20-201ENST00000516768 ABCC9O60706 1549 aa23.43■■□□□ 1.34
SCARNA20-201ENST00000516768 DCAF8L2P0C7V8 631 aa22.65■■□□□ 1.22
SCARNA20-201ENST00000516768 NACADO15069 1562 aa22.5■■□□□ 1.19
SCARNA20-201ENST00000516768 RB1CC1Q8TDY2 1594 aa22.5■■□□□ 1.19
SCARNA20-201ENST00000516768 MYO15BQ96JP2 1530 aa22.41■■□□□ 1.18
SCARNA20-201ENST00000516768 ZCCHC6Q5VYS8 1495 aaKnown RBP22.41■■□□□ 1.18
SCARNA20-201ENST00000516768 DCAF1Q9Y4B6 1507 aa22.3■■□□□ 1.16
SCARNA20-201ENST00000516768 PABPN1Q86U42 306 aaKnown RBP eCLIP22■■□□□ 1.11
SCARNA20-201ENST00000516768 UNC13AQ9UPW8 1703 aa21.92■■□□□ 1.1
SCARNA20-201ENST00000516768 BICRAQ9NZM4 1560 aa21.84■■□□□ 1.09
SCARNA20-201ENST00000516768 SCRIBQ14160 1630 aa21.77■■□□□ 1.08
SCARNA20-201ENST00000516768 DNAJC5BQ9UF47 199 aa21.65■■□□□ 1.06
SCARNA20-201ENST00000516768 SHROOM4Q9ULL8 1493 aa21.59■■□□□ 1.05
SCARNA20-201ENST00000516768 EIF4G1Q04637 1599 aaKnown RBP21.25■□□□□ 0.99
SCARNA20-201ENST00000516768 CC2D2AQ9P2K1 1620 aa21.16■□□□□ 0.98
SCARNA20-201ENST00000516768 CECR2Q9BXF3 1484 aa21.07■□□□□ 0.96
SCARNA20-201ENST00000516768 BAZ1AQ9NRL2 1556 aaPredicted RBP20.86■□□□□ 0.93
SCARNA20-201ENST00000516768 SMARCA4P51532 1647 aa20.85■□□□□ 0.93
SCARNA20-201ENST00000516768 NCAPD3P42695 1498 aa20.84■□□□□ 0.93
SCARNA20-201ENST00000516768 ATAD2BQ9ULI0 1458 aa20.81■□□□□ 0.92
SCARNA20-201ENST00000516768 MROH2BQ7Z745 1585 aa20.77■□□□□ 0.92
SCARNA20-201ENST00000516768 SMARCA2P51531 1590 aa20.75■□□□□ 0.91
SCARNA20-201ENST00000516768 PEG3Q9GZU2 1588 aa20.68■□□□□ 0.9
SCARNA20-201ENST00000516768 HMGXB3Q12766 1538 aa20.63■□□□□ 0.89
SCARNA20-201ENST00000516768 BAZ1BQ9UIG0 1483 aaKnown RBP20.61■□□□□ 0.89
SCARNA20-201ENST00000516768 RSF1Q96T23 1441 aaPredicted RBP20.58■□□□□ 0.88
SCARNA20-201ENST00000516768 WIZO95785 1651 aa20.51■□□□□ 0.87
SCARNA20-201ENST00000516768 NESP48681 1621 aa20.29■□□□□ 0.84
SCARNA20-201ENST00000516768 TOP2AP11388 1531 aaKnown RBP20.27■□□□□ 0.84
SCARNA20-201ENST00000516768 CADPSQ9ULU8 1353 aa20.24■□□□□ 0.83
SCARNA20-201ENST00000516768 LAMC3Q9Y6N6 1575 aa20.2■□□□□ 0.82
SCARNA20-201ENST00000516768 ERCC6Q03468 1493 aa20.18■□□□□ 0.82
SCARNA20-201ENST00000516768 PDS5BQ9NTI5 1447 aa20.14■□□□□ 0.81
SCARNA20-201ENST00000516768 CCDC88BA6NC98 1476 aa20.12■□□□□ 0.81
SCARNA20-201ENST00000516768 SUPT5HO00267 1087 aaKnown RBP20.12■□□□□ 0.81
SCARNA20-201ENST00000516768 CFTRP13569 1480 aa20.09■□□□□ 0.81
SCARNA20-201ENST00000516768 CUX2O14529 1486 aa19.98■□□□□ 0.79
SCARNA20-201ENST00000516768 FANCD2Q9BXW9 1451 aa19.95■□□□□ 0.78
SCARNA20-201ENST00000516768 KIF21AQ7Z4S6 1674 aa19.94■□□□□ 0.78
SCARNA20-201ENST00000516768 CEP164Q9UPV0 1460 aa19.9■□□□□ 0.78
SCARNA20-201ENST00000516768 THOC2Q8NI27 1593 aaKnown RBP19.88■□□□□ 0.77
SCARNA20-201ENST00000516768 MRC2Q9UBG0 1479 aa19.87■□□□□ 0.77
SCARNA20-201ENST00000516768 WDR62O43379 1518 aa19.78■□□□□ 0.76
SCARNA20-201ENST00000516768 PRDM2Q13029 1718 aa19.75■□□□□ 0.75
SCARNA20-201ENST00000516768 URB2Q14146 1524 aaKnown RBP19.74■□□□□ 0.75
SCARNA20-201ENST00000516768 ABCC8Q09428 1581 aa19.66■□□□□ 0.74
SCARNA20-201ENST00000516768 TOPBP1Q92547 1522 aa19.62■□□□□ 0.73
SCARNA20-201ENST00000516768 DNMBPQ6XZF7 1577 aa19.56■□□□□ 0.72
SCARNA20-201ENST00000516768 DNAJC5Q9H3Z4 198 aa19.51■□□□□ 0.71
SCARNA20-201ENST00000516768 IFT140Q96RY7 1462 aa19.51■□□□□ 0.71
SCARNA20-201ENST00000516768 CUX1P39880 1505 aa19.46■□□□□ 0.71
SCARNA20-201ENST00000516768 POLA1P09884 1462 aaPredicted RBP19.46■□□□□ 0.71
SCARNA20-201ENST00000516768 SOGA1O94964 1423 aa19.45■□□□□ 0.7
SCARNA20-201ENST00000516768 ZNF608Q9ULD9 1512 aaPredicted RBP19.42■□□□□ 0.7
SCARNA20-201ENST00000516768 FGD5Q6ZNL6 1462 aa19.4■□□□□ 0.7
SCARNA20-201ENST00000516768 RAD54L2Q9Y4B4 1467 aa19.4■□□□□ 0.7
SCARNA20-201ENST00000516768 TARBP1Q13395 1621 aaKnown RBP19.38■□□□□ 0.69
SCARNA20-201ENST00000516768 WRNQ14191 1432 aaPredicted RBP eCLIP19.38■□□□□ 0.69
SCARNA20-201ENST00000516768 AQRO60306 1485 aaKnown RBP eCLIP19.35■□□□□ 0.69
SCARNA20-201ENST00000516768 TDRD9Q8NDG6 1382 aaKnown RBP19.34■□□□□ 0.69
SCARNA20-201ENST00000516768 OSCARQ8IYS5 282 aa19.29■□□□□ 0.68
SCARNA20-201ENST00000516768 TOP2BQ02880 1626 aa19.28■□□□□ 0.68
SCARNA20-201ENST00000516768 SYNJ1O43426 1573 aa19.25■□□□□ 0.67
SCARNA20-201ENST00000516768 EIF4G3O43432 1585 aaKnown RBP19.24■□□□□ 0.67
SCARNA20-201ENST00000516768 BIVM-ERCC5R4GMW8 1640 aa19.24■□□□□ 0.67
SCARNA20-201ENST00000516768 ABCA10Q8WWZ4 1543 aa19.23■□□□□ 0.67
SCARNA20-201ENST00000516768 WDR97A6NE52 1622 aa19.19■□□□□ 0.66
SCARNA20-201ENST00000516768 GAPVD1Q14C86 1478 aa19.17■□□□□ 0.66
SCARNA20-201ENST00000516768 FBLN2P98095 1184 aa19.17■□□□□ 0.66
SCARNA20-201ENST00000516768 GRIN2BQ13224 1484 aa19.16■□□□□ 0.66
SCARNA20-201ENST00000516768 CHMP7Q8WUX9 453 aaPredicted RBP19.12■□□□□ 0.65
SCARNA20-201ENST00000516768 SNAPC4Q5SXM2 1469 aa19.1■□□□□ 0.65
SCARNA20-201ENST00000516768 MAGI1Q96QZ7 1491 aaPredicted RBP19.09■□□□□ 0.65
SCARNA20-201ENST00000516768 ABCA5Q8WWZ7 1642 aa19.07■□□□□ 0.64
SCARNA20-201ENST00000516768 SYNJ2O15056 1496 aa19.03■□□□□ 0.64
SCARNA20-201ENST00000516768 TRIM41Q8WV44 630 aa19.01■□□□□ 0.63
SCARNA20-201ENST00000516768 PBRM1Q86U86 1689 aa18.99■□□□□ 0.63
SCARNA20-201ENST00000516768 CHD1O14646 1710 aa18.99■□□□□ 0.63
SCARNA20-201ENST00000516768 ERICH3Q5RHP9 1530 aa18.99■□□□□ 0.63
SCARNA20-201ENST00000516768 IGF1RP08069 1367 aa18.98■□□□□ 0.63
SCARNA20-201ENST00000516768 KIF27Q86VH2 1401 aa18.98■□□□□ 0.63
SCARNA20-201ENST00000516768 FHAD1B1AJZ9 1412 aa18.97■□□□□ 0.63
SCARNA20-201ENST00000516768 GRIN2AQ12879 1464 aa18.9■□□□□ 0.62
SCARNA20-201ENST00000516768 ADAMTS12P58397 1594 aa18.88■□□□□ 0.61
SCARNA20-201ENST00000516768 CARMIL1Q5VZK9 1371 aa18.84■□□□□ 0.61
SCARNA20-201ENST00000516768 CLASP1Q7Z460 1538 aa18.84■□□□□ 0.61
SCARNA20-201ENST00000516768 NUP160Q12769 1436 aa18.83■□□□□ 0.61
SCARNA20-201ENST00000516768 ARHGEF11O15085 1522 aa18.83■□□□□ 0.6
SCARNA20-201ENST00000516768 RUSC2Q8N2Y8 1516 aa18.82■□□□□ 0.6
SCARNA20-201ENST00000516768 CHIC1Q5VXU3 224 aa18.8■□□□□ 0.6
SCARNA20-201ENST00000516768 RIMBP3CA6NJZ7 1639 aa18.8■□□□□ 0.6
SCARNA20-201ENST00000516768 RIMBP3BA6NNM3 1639 aa18.8■□□□□ 0.6
SCARNA20-201ENST00000516768 RIMBP3Q9UFD9 1639 aa18.8■□□□□ 0.6
SCARNA20-201ENST00000516768 CYB5RLQ6IPT4 315 aa18.79■□□□□ 0.6
SCARNA20-201ENST00000516768 CEP170Q5SW79 1584 aa18.77■□□□□ 0.6
SCARNA20-201ENST00000516768 JPH4Q96JJ6 628 aa18.76■□□□□ 0.59
SCARNA20-201ENST00000516768 CUL7Q14999 1698 aa18.75■□□□□ 0.59
SCARNA20-201ENST00000516768 CSRNP3Q8WYN3 585 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms