RNA–Protein interactions for RNA: ENST00000359726.7

APP-206, Transcript of amyloid beta precursor protein, humanhuman

TSL 2 BASIC

Gene APP, Length 3,294 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-206ENST00000359726 NISCHQ9Y2I1 1504 aa14.43□□□□□ -0.1
APP-206ENST00000359726 HRCP23327 699 aa12.98□□□□□ -0.33
APP-206ENST00000359726 MYO15BQ96JP2 1530 aa12.81□□□□□ -0.36
APP-206ENST00000359726 PELP1Q8IZL8 1130 aaKnown RBP12.6□□□□□ -0.39
APP-206ENST00000359726 PPARGC1BQ86YN6 1023 aaKnown RBP12.59□□□□□ -0.39
APP-206ENST00000359726 DCAF1Q9Y4B6 1507 aa12.54□□□□□ -0.4
APP-206ENST00000359726 CCDC180Q9P1Z9 1646 aa12.49□□□□□ -0.41
APP-206ENST00000359726 PCGF6Q9BYE7 350 aa12.45□□□□□ -0.42
APP-206ENST00000359726 CHIC1Q5VXU3 224 aa12.45□□□□□ -0.42
APP-206ENST00000359726 SHROOM4Q9ULL8 1493 aa12.39□□□□□ -0.43
APP-206ENST00000359726 ZCCHC6Q5VYS8 1495 aaKnown RBP12.37□□□□□ -0.43
APP-206ENST00000359726 SCAF1Q9H7N4 1312 aaKnown RBP12.35□□□□□ -0.43
APP-206ENST00000359726 SUPT5HO00267 1087 aaKnown RBP12.31□□□□□ -0.44
APP-206ENST00000359726 TRIM26Q12899 539 aaPredicted RBP12.15□□□□□ -0.46
APP-206ENST00000359726 MYT1Q01538 1121 aa12.12□□□□□ -0.47
APP-206ENST00000359726 ZEB1P37275 1124 aaPredicted RBP12.06□□□□□ -0.48
APP-206ENST00000359726 LOC105371045A0A1W2PR82 267 aa12.03□□□□□ -0.48
APP-206ENST00000359726 ACIN1Q9UKV3 1341 aaKnown RBP11.96□□□□□ -0.5
APP-206ENST00000359726 NEUROD1Q13562 356 aa11.91□□□□□ -0.5
APP-206ENST00000359726 ABCC9O60706 1549 aa11.83□□□□□ -0.52
APP-206ENST00000359726 GTF3C3Q9Y5Q9 886 aa11.77□□□□□ -0.53
APP-206ENST00000359726 TRIM41Q8WV44 630 aa11.64□□□□□ -0.55
APP-206ENST00000359726 RB1CC1Q8TDY2 1594 aa11.64□□□□□ -0.55
APP-206ENST00000359726 CENPBP07199 599 aaPredicted RBP11.6□□□□□ -0.55
APP-206ENST00000359726 DIEXFQ68CQ4 756 aaKnown RBP11.6□□□□□ -0.55
APP-206ENST00000359726 RSF1Q96T23 1441 aaPredicted RBP11.59□□□□□ -0.55
APP-206ENST00000359726 EIF4G1Q04637 1599 aaKnown RBP11.57□□□□□ -0.56
APP-206ENST00000359726 WRNQ14191 1432 aaPredicted RBP eCLIP11.52□□□□□ -0.57
APP-206ENST00000359726 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.51□□□□□ -0.57
APP-206ENST00000359726 TTBK1Q5TCY1 1321 aaPredicted RBP11.49□□□□□ -0.57
APP-206ENST00000359726 CCER1Q8TC90 406 aaPredicted RBP11.41□□□□□ -0.58
APP-206ENST00000359726 ZNF316A6NFI3 1004 aaPredicted RBP11.4□□□□□ -0.58
APP-206ENST00000359726 BCL11AQ9H165 835 aa11.36□□□□□ -0.59
APP-206ENST00000359726 MIER1Q8N108 512 aa11.34□□□□□ -0.59
APP-206ENST00000359726 FAM9AQ8IZU1 332 aaPredicted RBP11.34□□□□□ -0.59
APP-206ENST00000359726 ANP32EQ9BTT0 268 aa11.32□□□□□ -0.6
APP-206ENST00000359726 SCRIBQ14160 1630 aa11.31□□□□□ -0.6
APP-206ENST00000359726 CLSPNQ9HAW4 1339 aa11.3□□□□□ -0.6
APP-206ENST00000359726 TSHZ2Q9NRE2 1034 aa11.29□□□□□ -0.6
APP-206ENST00000359726 SUPT16HQ9Y5B9 1047 aaKnown RBP11.28□□□□□ -0.6
APP-206ENST00000359726 BAZ1AQ9NRL2 1556 aaPredicted RBP11.27□□□□□ -0.6
APP-206ENST00000359726 WIZO95785 1651 aa11.27□□□□□ -0.6
APP-206ENST00000359726 NACADO15069 1562 aa11.27□□□□□ -0.61
APP-206ENST00000359726 MROH2BQ7Z745 1585 aa11.25□□□□□ -0.61
APP-206ENST00000359726 CEP162Q5TB80 1403 aa11.25□□□□□ -0.61
APP-206ENST00000359726 DCAF8L2P0C7V8 631 aa11.24□□□□□ -0.61
APP-206ENST00000359726 YTHDC1Q96MU7 727 aaKnown RBP11.22□□□□□ -0.61
APP-206ENST00000359726 TNIKQ9UKE5 1360 aa11.2□□□□□ -0.62
APP-206ENST00000359726 CECR2Q9BXF3 1484 aa11.19□□□□□ -0.62
APP-206ENST00000359726 CSRNP3Q8WYN3 585 aa11.19□□□□□ -0.62
APP-206ENST00000359726 ABCC8Q09428 1581 aa11.19□□□□□ -0.62
APP-206ENST00000359726 CCDC88BA6NC98 1476 aa11.16□□□□□ -0.62
APP-206ENST00000359726 EHMT2Q96KQ7 1210 aa11.12□□□□□ -0.63
APP-206ENST00000359726 KIF21BO75037 1637 aa11.08□□□□□ -0.64
APP-206ENST00000359726 SOGA1O94964 1423 aa11.08□□□□□ -0.64
APP-206ENST00000359726 EEA1Q15075 1411 aa11.07□□□□□ -0.64
APP-206ENST00000359726 SMARCA2P51531 1590 aa11.07□□□□□ -0.64
APP-206ENST00000359726 TOP2AP11388 1531 aaKnown RBP11.06□□□□□ -0.64
APP-206ENST00000359726 RUSC2Q8N2Y8 1516 aa11.06□□□□□ -0.64
APP-206ENST00000359726 GOLGA3Q08378 1498 aa11.02□□□□□ -0.64
APP-206ENST00000359726 CUX2O14529 1486 aa11.01□□□□□ -0.65
APP-206ENST00000359726 DHX57Q6P158 1386 aaKnown RBP11.01□□□□□ -0.65
APP-206ENST00000359726 PRKCSHP14314 528 aaPredicted RBP11.01□□□□□ -0.65
APP-206ENST00000359726 DNAJC5BQ9UF47 199 aa11□□□□□ -0.65
APP-206ENST00000359726 MSH5O43196 834 aa10.97□□□□□ -0.65
APP-206ENST00000359726 CLIP1P30622 1438 aa10.97□□□□□ -0.65
APP-206ENST00000359726 VPS8Q8N3P4 1428 aa10.96□□□□□ -0.65
APP-206ENST00000359726 RBM19Q9Y4C8 960 aaKnown RBP10.94□□□□□ -0.66
APP-206ENST00000359726 BAZ1BQ9UIG0 1483 aaKnown RBP10.93□□□□□ -0.66
APP-206ENST00000359726 SMARCA4P51532 1647 aa10.93□□□□□ -0.66
APP-206ENST00000359726 CEP164Q9UPV0 1460 aa10.9□□□□□ -0.66
APP-206ENST00000359726 KCNH8Q96L42 1107 aa10.9□□□□□ -0.66
APP-206ENST00000359726 MAPKBP1O60336 1514 aa10.9□□□□□ -0.66
APP-206ENST00000359726 SYNJ1O43426 1573 aa10.89□□□□□ -0.67
APP-206ENST00000359726 RRBP1Q9P2E9 1410 aaKnown RBP10.87□□□□□ -0.67
APP-206ENST00000359726 HNRNPUL2Q1KMD3 747 aaKnown RBP10.87□□□□□ -0.67
APP-206ENST00000359726 FANCIQ9NVI1 1328 aa10.86□□□□□ -0.67
APP-206ENST00000359726 PABPN1Q86U42 306 aaKnown RBP eCLIP10.85□□□□□ -0.67
APP-206ENST00000359726 UNC13AQ9UPW8 1703 aa10.82□□□□□ -0.68
APP-206ENST00000359726 ARAP1Q96P48 1450 aa10.81□□□□□ -0.68
APP-206ENST00000359726 RAPGEF2Q9Y4G8 1499 aa10.8□□□□□ -0.68
APP-206ENST00000359726 FKBP8Q14318 412 aa10.8□□□□□ -0.68
APP-206ENST00000359726 WDR97A6NE52 1622 aa10.79□□□□□ -0.68
APP-206ENST00000359726 PEG3Q9GZU2 1588 aa10.78□□□□□ -0.68
APP-206ENST00000359726 PPP1R15AO75807 674 aaPredicted RBP10.76□□□□□ -0.69
APP-206ENST00000359726 ERICH3Q5RHP9 1530 aa10.76□□□□□ -0.69
APP-206ENST00000359726 BCANQ96GW7 911 aa10.76□□□□□ -0.69
APP-206ENST00000359726 APLP2Q06481 763 aa10.75□□□□□ -0.69
APP-206ENST00000359726 UBTFP17480 764 aaKnown RBP10.74□□□□□ -0.69
APP-206ENST00000359726 BIVM-ERCC5R4GMW8 1640 aa10.73□□□□□ -0.69
APP-206ENST00000359726 TOP2BQ02880 1626 aa10.71□□□□□ -0.7
APP-206ENST00000359726 CCER2I3L3R5 266 aa10.7□□□□□ -0.7
APP-206ENST00000359726 PRXQ9BXM0 1461 aa10.69□□□□□ -0.7
APP-206ENST00000359726 MYT1LQ9UL68 1186 aa10.69□□□□□ -0.7
APP-206ENST00000359726 ITGAEP38570 1179 aa10.68□□□□□ -0.7
APP-206ENST00000359726 KANK4Q5T7N3 995 aaPredicted RBP10.66□□□□□ -0.7
APP-206ENST00000359726 KDM5BQ9UGL1 1544 aa10.66□□□□□ -0.7
APP-206ENST00000359726 MAP3K1Q13233 1512 aa10.65□□□□□ -0.7
APP-206ENST00000359726 DEKP35659 375 aaKnown RBP10.65□□□□□ -0.7
APP-206ENST00000359726 ERICH6Q7L0X2 663 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms