RNA–Protein interactions for RNA: ENST00000513431.5

MGAT1-222, Transcript of mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase, human

TSL 2

Gene MGAT1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MGAT1-222	ENST00000513431	NISCH	Q9Y2I1	1504 aa		44.67	■■■■■ 4.74
MGAT1-222	ENST00000513431	CCDC180	Q9P1Z9	1646 aa		40.09	■■■■■ 4.01
MGAT1-222	ENST00000513431	ABCC9	O60706	1549 aa		40.05	■■■■■ 4
MGAT1-222	ENST00000513431	RB1CC1	Q8TDY2	1594 aa		38.18	■■■■□ 3.7
MGAT1-222	ENST00000513431	NACAD	O15069	1562 aa		37.91	■■■■□ 3.66
MGAT1-222	ENST00000513431	DCAF8L2	P0C7V8	631 aa		37.76	■■■■□ 3.64
MGAT1-222	ENST00000513431	DNAJC5B	Q9UF47	199 aa		37.43	■■■■□ 3.58
MGAT1-222	ENST00000513431	MYO15B	Q96JP2	1530 aa		37.4	■■■■□ 3.58
MGAT1-222	ENST00000513431	PABPN1	Q86U42	306 aa	Known RBP eCLIP	37.28	■■■■□ 3.56
MGAT1-222	ENST00000513431	UNC13A	Q9UPW8	1703 aa		37.19	■■■■□ 3.54
MGAT1-222	ENST00000513431	ZCCHC6	Q5VYS8	1495 aa	Known RBP	37.02	■■■■□ 3.52
MGAT1-222	ENST00000513431	BICRA	Q9NZM4	1560 aa		36.95	■■■■□ 3.51
MGAT1-222	ENST00000513431	DCAF1	Q9Y4B6	1507 aa		36.91	■■■■□ 3.5
MGAT1-222	ENST00000513431	SHROOM4	Q9ULL8	1493 aa		36.6	■■■■□ 3.45
MGAT1-222	ENST00000513431	SCRIB	Q14160	1630 aa		36.52	■■■■□ 3.44
MGAT1-222	ENST00000513431	CC2D2A	Q9P2K1	1620 aa		36.17	■■■■□ 3.38
MGAT1-222	ENST00000513431	EIF4G1	Q04637	1599 aa	Known RBP	36.1	■■■■□ 3.37
MGAT1-222	ENST00000513431	CECR2	Q9BXF3	1484 aa		36.1	■■■■□ 3.37
MGAT1-222	ENST00000513431	NCAPD3	P42695	1498 aa		34.97	■■■■□ 3.19
MGAT1-222	ENST00000513431	ATAD2B	Q9ULI0	1458 aa		34.86	■■■■□ 3.17
MGAT1-222	ENST00000513431	SMARCA4	P51532	1647 aa		34.84	■■■■□ 3.17
MGAT1-222	ENST00000513431	SMARCA2	P51531	1590 aa		34.83	■■■■□ 3.17
MGAT1-222	ENST00000513431	HMGXB3	Q12766	1538 aa		34.74	■■■■□ 3.15
MGAT1-222	ENST00000513431	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	34.71	■■■■□ 3.15
MGAT1-222	ENST00000513431	ERCC6	Q03468	1493 aa		34.65	■■■■□ 3.14
MGAT1-222	ENST00000513431	BAZ1B	Q9UIG0	1483 aa	Known RBP	34.58	■■■■□ 3.13
MGAT1-222	ENST00000513431	CUX2	O14529	1486 aa		34.54	■■■■□ 3.12
MGAT1-222	ENST00000513431	PEG3	Q9GZU2	1588 aa		34.49	■■■■□ 3.11
MGAT1-222	ENST00000513431	DNAJC5	Q9H3Z4	198 aa		34.43	■■■■□ 3.1
MGAT1-222	ENST00000513431	MROH2B	Q7Z745	1585 aa		34.39	■■■■□ 3.1
MGAT1-222	ENST00000513431	NES	P48681	1621 aa		34.37	■■■■□ 3.09
MGAT1-222	ENST00000513431	LAMC3	Q9Y6N6	1575 aa		34.2	■■■■□ 3.07
MGAT1-222	ENST00000513431	PDS5B	Q9NTI5	1447 aa		34.04	■■■■□ 3.04
MGAT1-222	ENST00000513431	THOC2	Q8NI27	1593 aa	Known RBP	34.03	■■■■□ 3.04
MGAT1-222	ENST00000513431	WIZ	O95785	1651 aa		33.97	■■■■□ 3.03
MGAT1-222	ENST00000513431	KIF21A	Q7Z4S6	1674 aa		33.93	■■■■□ 3.02
MGAT1-222	ENST00000513431	CADPS	Q9ULU8	1353 aa		33.93	■■■■□ 3.02
MGAT1-222	ENST00000513431	MRC2	Q9UBG0	1479 aa		33.72	■■■□□ 2.99
MGAT1-222	ENST00000513431	RSF1	Q96T23	1441 aa	Predicted RBP	33.7	■■■□□ 2.99
MGAT1-222	ENST00000513431	WDR62	O43379	1518 aa		33.61	■■■□□ 2.97
MGAT1-222	ENST00000513431	CEP164	Q9UPV0	1460 aa		33.61	■■■□□ 2.97
MGAT1-222	ENST00000513431	TOP2A	P11388	1531 aa	Known RBP	33.6	■■■□□ 2.97
MGAT1-222	ENST00000513431	FANCD2	Q9BXW9	1451 aa		33.55	■■■□□ 2.96
MGAT1-222	ENST00000513431	CFTR	P13569	1480 aa		33.53	■■■□□ 2.96
MGAT1-222	ENST00000513431	URB2	Q14146	1524 aa	Known RBP	33.23	■■■□□ 2.91
MGAT1-222	ENST00000513431	PRDM2	Q13029	1718 aa		33.19	■■■□□ 2.9
MGAT1-222	ENST00000513431	CCDC88B	A6NC98	1476 aa		33.19	■■■□□ 2.9
MGAT1-222	ENST00000513431	TRIM41	Q8WV44	630 aa		32.99	■■■□□ 2.87
MGAT1-222	ENST00000513431	OSCAR	Q8IYS5	282 aa		32.98	■■■□□ 2.87
MGAT1-222	ENST00000513431	IFT140	Q96RY7	1462 aa		32.93	■■■□□ 2.86
MGAT1-222	ENST00000513431	TOPBP1	Q92547	1522 aa		32.9	■■■□□ 2.86
MGAT1-222	ENST00000513431	ABCC8	Q09428	1581 aa		32.9	■■■□□ 2.86
MGAT1-222	ENST00000513431	ZNF608	Q9ULD9	1512 aa	Predicted RBP	32.81	■■■□□ 2.84
MGAT1-222	ENST00000513431	DNMBP	Q6XZF7	1577 aa		32.8	■■■□□ 2.84
MGAT1-222	ENST00000513431	EIF4G3	O43432	1585 aa	Known RBP	32.66	■■■□□ 2.82
MGAT1-222	ENST00000513431	TARBP1	Q13395	1621 aa	Known RBP	32.57	■■■□□ 2.8
MGAT1-222	ENST00000513431	POLA1	P09884	1462 aa	Predicted RBP	32.56	■■■□□ 2.8
MGAT1-222	ENST00000513431	AQR	O60306	1485 aa	Known RBP eCLIP	32.54	■■■□□ 2.8
MGAT1-222	ENST00000513431	RIMBP3C	A6NJZ7	1639 aa		32.49	■■■□□ 2.79
MGAT1-222	ENST00000513431	RIMBP3B	A6NNM3	1639 aa		32.49	■■■□□ 2.79
MGAT1-222	ENST00000513431	RIMBP3	Q9UFD9	1639 aa		32.49	■■■□□ 2.79
MGAT1-222	ENST00000513431	SOGA1	O94964	1423 aa		32.44	■■■□□ 2.78
MGAT1-222	ENST00000513431	RAD54L2	Q9Y4B4	1467 aa		32.42	■■■□□ 2.78
MGAT1-222	ENST00000513431	ARHGEF11	O15085	1522 aa		32.41	■■■□□ 2.78
MGAT1-222	ENST00000513431	FBLN2	P98095	1184 aa		32.4	■■■□□ 2.78
MGAT1-222	ENST00000513431	CHD1	O14646	1710 aa		32.39	■■■□□ 2.78
MGAT1-222	ENST00000513431	FGD5	Q6ZNL6	1462 aa		32.37	■■■□□ 2.77
MGAT1-222	ENST00000513431	TDRD9	Q8NDG6	1382 aa	Known RBP	32.35	■■■□□ 2.77
MGAT1-222	ENST00000513431	WDR97	A6NE52	1622 aa		32.33	■■■□□ 2.77
MGAT1-222	ENST00000513431	CUX1	P39880	1505 aa		32.32	■■■□□ 2.76
MGAT1-222	ENST00000513431	SUPT5H	O00267	1087 aa	Known RBP	32.3	■■■□□ 2.76
MGAT1-222	ENST00000513431	SNAPC4	Q5SXM2	1469 aa		32.23	■■■□□ 2.75
MGAT1-222	ENST00000513431	CYB5RL	Q6IPT4	315 aa		32.19	■■■□□ 2.74
MGAT1-222	ENST00000513431	MAGI1	Q96QZ7	1491 aa	Predicted RBP	32.18	■■■□□ 2.74
MGAT1-222	ENST00000513431	GRIN2B	Q13224	1484 aa		32.17	■■■□□ 2.74
MGAT1-222	ENST00000513431	CHMP7	Q8WUX9	453 aa	Predicted RBP	32.16	■■■□□ 2.74
MGAT1-222	ENST00000513431	SYNJ1	O43426	1573 aa		32.08	■■■□□ 2.73
MGAT1-222	ENST00000513431	ARAP1	Q96P48	1450 aa		32.08	■■■□□ 2.73
MGAT1-222	ENST00000513431	SYNJ2	O15056	1496 aa		32.05	■■■□□ 2.72
MGAT1-222	ENST00000513431	GAPVD1	Q14C86	1478 aa		32.05	■■■□□ 2.72
MGAT1-222	ENST00000513431	CLASP1	Q7Z460	1538 aa		32.02	■■■□□ 2.72
MGAT1-222	ENST00000513431	ABCA10	Q8WWZ4	1543 aa		32.02	■■■□□ 2.72
MGAT1-222	ENST00000513431	PBRM1	Q86U86	1689 aa		32	■■■□□ 2.71
MGAT1-222	ENST00000513431	ABCA5	Q8WWZ7	1642 aa		31.94	■■■□□ 2.7
MGAT1-222	ENST00000513431	WRN	Q14191	1432 aa	Predicted RBP eCLIP	31.93	■■■□□ 2.7
MGAT1-222	ENST00000513431	TRH	P20396	242 aa	Predicted RBP	31.87	■■■□□ 2.69
MGAT1-222	ENST00000513431	TOP2B	Q02880	1626 aa		31.84	■■■□□ 2.69
MGAT1-222	ENST00000513431	BIVM-ERCC5	R4GMW8	1640 aa		31.82	■■■□□ 2.69
MGAT1-222	ENST00000513431	GRIN2A	Q12879	1464 aa		31.74	■■■□□ 2.67
MGAT1-222	ENST00000513431	ADAMTS12	P58397	1594 aa		31.73	■■■□□ 2.67
MGAT1-222	ENST00000513431	FHAD1	B1AJZ9	1412 aa		31.66	■■■□□ 2.66
MGAT1-222	ENST00000513431	ERICH3	Q5RHP9	1530 aa		31.63	■■■□□ 2.65
MGAT1-222	ENST00000513431	NUP160	Q12769	1436 aa		31.61	■■■□□ 2.65
MGAT1-222	ENST00000513431	CEP170	Q5SW79	1584 aa		31.59	■■■□□ 2.65
MGAT1-222	ENST00000513431	ERCC6L2	Q5T890	1561 aa		31.48	■■■□□ 2.63
MGAT1-222	ENST00000513431	SHROOM2	Q13796	1616 aa		31.45	■■■□□ 2.62
MGAT1-222	ENST00000513431	PRG4	Q92954	1404 aa	Predicted RBP	31.33	■■■□□ 2.61
MGAT1-222	ENST00000513431	JPH4	Q96JJ6	628 aa		31.31	■■■□□ 2.6
MGAT1-222	ENST00000513431	KIF27	Q86VH2	1401 aa		31.28	■■■□□ 2.6
MGAT1-222	ENST00000513431	RUSC2	Q8N2Y8	1516 aa		31.27	■■■□□ 2.6

Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms