Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 RPS2P35-201ENST00000443417 897 ntBASIC29.94■■■□□ 2.38
PPP4R3AQ6IN85 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
PPP4R3AQ6IN85 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC29.92■■■□□ 2.38
PPP4R3AQ6IN85 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC29.92■■■□□ 2.38
PPP4R3AQ6IN85 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC29.92■■■□□ 2.38
PPP4R3AQ6IN85 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
PPP4R3AQ6IN85 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC29.91■■■□□ 2.38
PPP4R3AQ6IN85 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC29.89■■■□□ 2.38
PPP4R3AQ6IN85 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
PPP4R3AQ6IN85 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC29.87■■■□□ 2.37
PPP4R3AQ6IN85 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC29.87■■■□□ 2.37
PPP4R3AQ6IN85 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
PPP4R3AQ6IN85 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
PPP4R3AQ6IN85 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC29.85■■■□□ 2.37
PPP4R3AQ6IN85 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
PPP4R3AQ6IN85 AC044849.2-201ENST00000606596 710 ntBASIC29.84■■■□□ 2.37
PPP4R3AQ6IN85 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC29.83■■■□□ 2.37
PPP4R3AQ6IN85 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
PPP4R3AQ6IN85 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
PPP4R3AQ6IN85 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
PPP4R3AQ6IN85 AC108673.1-201ENST00000510422 1159 ntBASIC29.82■■■□□ 2.36
PPP4R3AQ6IN85 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
PPP4R3AQ6IN85 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
PPP4R3AQ6IN85 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC29.81■■■□□ 2.36
PPP4R3AQ6IN85 ABCB10P1-201ENST00000614297 2181 ntBASIC29.81■■■□□ 2.36
PPP4R3AQ6IN85 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC29.8■■■□□ 2.36
PPP4R3AQ6IN85 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
PPP4R3AQ6IN85 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC29.8■■■□□ 2.36
PPP4R3AQ6IN85 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC29.8■■■□□ 2.36
PPP4R3AQ6IN85 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC29.8■■■□□ 2.36
PPP4R3AQ6IN85 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC29.79■■■□□ 2.36
PPP4R3AQ6IN85 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
PPP4R3AQ6IN85 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
PPP4R3AQ6IN85 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC29.78■■■□□ 2.36
PPP4R3AQ6IN85 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
PPP4R3AQ6IN85 MIR6090-201ENST00000622481 60 ntBASIC29.78■■■□□ 2.36
PPP4R3AQ6IN85 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC29.78■■■□□ 2.36
PPP4R3AQ6IN85 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC29.77■■■□□ 2.36
PPP4R3AQ6IN85 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC29.77■■■□□ 2.36
PPP4R3AQ6IN85 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
PPP4R3AQ6IN85 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC29.76■■■□□ 2.36
PPP4R3AQ6IN85 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
PPP4R3AQ6IN85 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC29.75■■■□□ 2.35
PPP4R3AQ6IN85 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
PPP4R3AQ6IN85 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
PPP4R3AQ6IN85 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC29.74■■■□□ 2.35
PPP4R3AQ6IN85 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
PPP4R3AQ6IN85 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC29.73■■■□□ 2.35
PPP4R3AQ6IN85 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
PPP4R3AQ6IN85 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
PPP4R3AQ6IN85 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
PPP4R3AQ6IN85 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
PPP4R3AQ6IN85 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC29.71■■■□□ 2.35
PPP4R3AQ6IN85 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC29.71■■■□□ 2.35
PPP4R3AQ6IN85 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC29.71■■■□□ 2.35
PPP4R3AQ6IN85 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC29.7■■■□□ 2.34
PPP4R3AQ6IN85 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
PPP4R3AQ6IN85 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
PPP4R3AQ6IN85 BOD1-206ENST00000480951 814 ntTSL 2 BASIC29.68■■■□□ 2.34
PPP4R3AQ6IN85 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC29.67■■■□□ 2.34
PPP4R3AQ6IN85 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC29.67■■■□□ 2.34
PPP4R3AQ6IN85 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
PPP4R3AQ6IN85 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC29.67■■■□□ 2.34
PPP4R3AQ6IN85 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
PPP4R3AQ6IN85 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC29.66■■■□□ 2.34
PPP4R3AQ6IN85 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC29.66■■■□□ 2.34
PPP4R3AQ6IN85 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
PPP4R3AQ6IN85 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC29.66■■■□□ 2.34
PPP4R3AQ6IN85 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
PPP4R3AQ6IN85 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
PPP4R3AQ6IN85 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
PPP4R3AQ6IN85 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
PPP4R3AQ6IN85 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC29.63■■■□□ 2.33
PPP4R3AQ6IN85 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC29.62■■■□□ 2.33
PPP4R3AQ6IN85 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC29.62■■■□□ 2.33
PPP4R3AQ6IN85 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC29.62■■■□□ 2.33
PPP4R3AQ6IN85 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC29.62■■■□□ 2.33
PPP4R3AQ6IN85 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
PPP4R3AQ6IN85 CIB2-204ENST00000557846 934 ntTSL 3 BASIC29.61■■■□□ 2.33
PPP4R3AQ6IN85 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC29.61■■■□□ 2.33
PPP4R3AQ6IN85 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC29.61■■■□□ 2.33
PPP4R3AQ6IN85 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
PPP4R3AQ6IN85 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC29.6■■■□□ 2.33
PPP4R3AQ6IN85 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC29.58■■■□□ 2.33
PPP4R3AQ6IN85 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC29.58■■■□□ 2.33
PPP4R3AQ6IN85 AC127502.1-201ENST00000399971 1502 ntBASIC29.58■■■□□ 2.33
PPP4R3AQ6IN85 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC29.57■■■□□ 2.32
PPP4R3AQ6IN85 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
PPP4R3AQ6IN85 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
PPP4R3AQ6IN85 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
PPP4R3AQ6IN85 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
PPP4R3AQ6IN85 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
PPP4R3AQ6IN85 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
PPP4R3AQ6IN85 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
PPP4R3AQ6IN85 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC29.54■■■□□ 2.32
PPP4R3AQ6IN85 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC29.54■■■□□ 2.32
PPP4R3AQ6IN85 EI24-212ENST00000615917 1407 ntTSL 2 BASIC29.54■■■□□ 2.32
PPP4R3AQ6IN85 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
PPP4R3AQ6IN85 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC29.51■■■□□ 2.31
PPP4R3AQ6IN85 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC29.51■■■□□ 2.31
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms