Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC38.89■■■■□ 3.82
PPP4R3AQ6IN85 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC38.39■■■■□ 3.74
PPP4R3AQ6IN85 AL356512.1-201ENST00000607453 1739 ntBASIC37.84■■■■□ 3.65
PPP4R3AQ6IN85 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC37.81■■■■□ 3.64
PPP4R3AQ6IN85 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC37.65■■■■□ 3.62
PPP4R3AQ6IN85 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC37.62■■■■□ 3.61
PPP4R3AQ6IN85 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC37.32■■■■□ 3.56
PPP4R3AQ6IN85 HES6-203ENST00000409160 1600 ntTSL 2 BASIC37.3■■■■□ 3.56
PPP4R3AQ6IN85 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC36.95■■■■□ 3.51
PPP4R3AQ6IN85 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC36.8■■■■□ 3.48
PPP4R3AQ6IN85 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC36.69■■■■□ 3.46
PPP4R3AQ6IN85 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC36.62■■■■□ 3.45
PPP4R3AQ6IN85 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC36.57■■■■□ 3.44
PPP4R3AQ6IN85 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC36.34■■■■□ 3.41
PPP4R3AQ6IN85 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC36.25■■■■□ 3.39
PPP4R3AQ6IN85 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC36.03■■■■□ 3.36
PPP4R3AQ6IN85 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC35.87■■■■□ 3.33
PPP4R3AQ6IN85 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC35.79■■■■□ 3.32
PPP4R3AQ6IN85 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC35.79■■■■□ 3.32
PPP4R3AQ6IN85 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC35.64■■■■□ 3.3
PPP4R3AQ6IN85 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC35.59■■■■□ 3.29
PPP4R3AQ6IN85 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC35.54■■■■□ 3.28
PPP4R3AQ6IN85 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC35.3■■■■□ 3.24
PPP4R3AQ6IN85 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC35.22■■■■□ 3.23
PPP4R3AQ6IN85 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC35.2■■■■□ 3.23
PPP4R3AQ6IN85 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC35.19■■■■□ 3.22
PPP4R3AQ6IN85 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC35.14■■■■□ 3.22
PPP4R3AQ6IN85 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC35.09■■■■□ 3.21
PPP4R3AQ6IN85 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC34.93■■■■□ 3.18
PPP4R3AQ6IN85 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
PPP4R3AQ6IN85 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC34.83■■■■□ 3.17
PPP4R3AQ6IN85 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC34.76■■■■□ 3.15
PPP4R3AQ6IN85 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC34.71■■■■□ 3.15
PPP4R3AQ6IN85 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
PPP4R3AQ6IN85 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC34.69■■■■□ 3.14
PPP4R3AQ6IN85 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
PPP4R3AQ6IN85 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC34.68■■■■□ 3.14
PPP4R3AQ6IN85 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC34.68■■■■□ 3.14
PPP4R3AQ6IN85 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC34.66■■■■□ 3.14
PPP4R3AQ6IN85 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
PPP4R3AQ6IN85 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
PPP4R3AQ6IN85 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
PPP4R3AQ6IN85 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC34.58■■■■□ 3.13
PPP4R3AQ6IN85 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC34.51■■■■□ 3.12
PPP4R3AQ6IN85 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
PPP4R3AQ6IN85 INO80B-203ENST00000409917 796 ntTSL 2 BASIC34.44■■■■□ 3.1
PPP4R3AQ6IN85 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
PPP4R3AQ6IN85 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC34.34■■■■□ 3.09
PPP4R3AQ6IN85 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC34.27■■■■□ 3.08
PPP4R3AQ6IN85 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC34.2■■■■□ 3.07
PPP4R3AQ6IN85 AC015813.7-201ENST00000623294 581 ntBASIC34.12■■■■□ 3.05
PPP4R3AQ6IN85 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC34.11■■■■□ 3.05
PPP4R3AQ6IN85 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC34.09■■■■□ 3.05
PPP4R3AQ6IN85 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC34.01■■■■□ 3.03
PPP4R3AQ6IN85 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC33.95■■■■□ 3.03
PPP4R3AQ6IN85 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC33.86■■■■□ 3.01
PPP4R3AQ6IN85 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC33.83■■■■□ 3.01
PPP4R3AQ6IN85 ILK-212ENST00000532063 1617 ntTSL 2 BASIC33.82■■■■□ 3.01
PPP4R3AQ6IN85 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC33.8■■■■□ 3
PPP4R3AQ6IN85 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC33.75■■■□□ 2.99
PPP4R3AQ6IN85 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC33.74■■■□□ 2.99
PPP4R3AQ6IN85 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC33.69■■■□□ 2.98
PPP4R3AQ6IN85 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
PPP4R3AQ6IN85 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC33.62■■■□□ 2.97
PPP4R3AQ6IN85 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC33.59■■■□□ 2.97
PPP4R3AQ6IN85 AC006077.2-201ENST00000623591 457 ntBASIC33.58■■■□□ 2.97
PPP4R3AQ6IN85 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC33.57■■■□□ 2.96
PPP4R3AQ6IN85 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
PPP4R3AQ6IN85 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC33.53■■■□□ 2.96
PPP4R3AQ6IN85 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC33.52■■■□□ 2.96
PPP4R3AQ6IN85 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC33.51■■■□□ 2.95
PPP4R3AQ6IN85 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
PPP4R3AQ6IN85 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC33.48■■■□□ 2.95
PPP4R3AQ6IN85 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC33.48■■■□□ 2.95
PPP4R3AQ6IN85 ZNRF2P1-201ENST00000441407 443 ntBASIC33.38■■■□□ 2.93
PPP4R3AQ6IN85 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC33.37■■■□□ 2.93
PPP4R3AQ6IN85 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC33.35■■■□□ 2.93
PPP4R3AQ6IN85 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
PPP4R3AQ6IN85 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC33.33■■■□□ 2.93
PPP4R3AQ6IN85 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC33.31■■■□□ 2.92
PPP4R3AQ6IN85 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
PPP4R3AQ6IN85 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC33.27■■■□□ 2.92
PPP4R3AQ6IN85 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
PPP4R3AQ6IN85 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
PPP4R3AQ6IN85 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
PPP4R3AQ6IN85 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
PPP4R3AQ6IN85 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC33.16■■■□□ 2.9
PPP4R3AQ6IN85 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
PPP4R3AQ6IN85 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC33.1■■■□□ 2.89
PPP4R3AQ6IN85 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC33.07■■■□□ 2.89
PPP4R3AQ6IN85 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC33■■■□□ 2.87
PPP4R3AQ6IN85 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC32.97■■■□□ 2.87
PPP4R3AQ6IN85 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
PPP4R3AQ6IN85 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC32.96■■■□□ 2.87
PPP4R3AQ6IN85 AC145285.7-201ENST00000614819 1539 ntBASIC32.95■■■□□ 2.87
PPP4R3AQ6IN85 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC32.95■■■□□ 2.86
PPP4R3AQ6IN85 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
PPP4R3AQ6IN85 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
PPP4R3AQ6IN85 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
PPP4R3AQ6IN85 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms