Protein–RNA interactions for Protein: P12956

XRCC6, X-ray repair cross-complementing protein 6, humanhuman

Known RBP eCLIP

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6P12956 ZEB1-215ENST00000559476 1205 ntTSL 27.25□□□□□ -1.251e-8■■■■■ 35.6
XRCC6P12956 ZEB1-209ENST00000542879 3645 ntTSL 27.13□□□□□ -1.271e-8■■■■■ 35.6
XRCC6P12956 ZEB1-213ENST00000558832 570 ntTSL 46.95□□□□□ -1.31e-8■■■■■ 35.6
XRCC6P12956 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.361e-8■■■■■ 35.6
XRCC6P12956 ZEB1-211ENST00000558440 886 ntTSL 1 (best)6.57□□□□□ -1.361e-8■■■■■ 35.6
XRCC6P12956 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.371e-8■■■■■ 35.6
XRCC6P12956 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.421e-8■■■■■ 35.6
XRCC6P12956 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.521e-8■■■■■ 35.6
XRCC6P12956 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.531e-8■■■■■ 35.6
XRCC6P12956 ZEB1-225ENST00000606671 571 ntTSL 44.87□□□□□ -1.631e-8■■■■■ 35.6
XRCC6P12956 ZEB1-212ENST00000558655 2773 ntTSL 24.71□□□□□ -1.651e-8■■■■■ 35.6
XRCC6P12956 ZEB1-224ENST00000606161 482 ntTSL 33.72□□□□□ -1.811e-8■■■■■ 35.6
XRCC6P12956 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC34.19■■■■□ 3.062e-8■■■■■ 34.8
XRCC6P12956 GGA1-212ENST00000439161 568 ntTSL 426.61■■□□□ 1.852e-8■■■■■ 34.8
XRCC6P12956 GGA1-214ENST00000449944 927 ntTSL 521.21■□□□□ 0.992e-8■■■■■ 34.8
XRCC6P12956 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.982e-8■■■■■ 34.8
XRCC6P12956 GGA1-215ENST00000453208 639 ntTSL 520.71■□□□□ 0.912e-8■■■■■ 34.8
XRCC6P12956 GGA1-207ENST00000411501 661 ntTSL 319.75■□□□□ 0.752e-8■■■■■ 34.8
XRCC6P12956 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC18.77■□□□□ 0.592e-8■■■■■ 34.8
XRCC6P12956 GGA1-211ENST00000431745 483 ntTSL 516.95■□□□□ 0.32e-8■■■■■ 34.8
XRCC6P12956 GGA1-213ENST00000447515 577 ntTSL 416.49■□□□□ 0.232e-8■■■■■ 34.8
XRCC6P12956 GGA1-210ENST00000429218 566 ntTSL 516.04■□□□□ 0.162e-8■■■■■ 34.8
XRCC6P12956 GGA1-220ENST00000484804 449 ntTSL 315.84■□□□□ 0.132e-8■■■■■ 34.8
XRCC6P12956 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC15.68■□□□□ 0.12e-8■■■■■ 34.8
XRCC6P12956 GGA1-222ENST00000489772 1384 ntTSL 212.37□□□□□ -0.432e-8■■■■■ 34.8
XRCC6P12956 GGA1-221ENST00000488672 547 ntTSL 58.52□□□□□ -1.052e-8■■■■■ 34.8
XRCC6P12956 GGA1-205ENST00000405147 575 ntTSL 4 BASIC7.25□□□□□ -1.252e-8■■■■■ 34.8
XRCC6P12956 TGFBR1-207ENST00000549766 1678 ntTSL 528.22■■■□□ 2.112e-6■■■■■ 34.5
XRCC6P12956 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.572e-6■■■■■ 34.5
XRCC6P12956 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC24.74■■□□□ 1.552e-6■■■■■ 34.5
XRCC6P12956 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.442e-6■■■■■ 34.5
XRCC6P12956 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC23.93■■□□□ 1.422e-6■■■■■ 34.5
XRCC6P12956 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC23.59■■□□□ 1.372e-6■■■■■ 34.5
XRCC6P12956 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC23.46■■□□□ 1.352e-6■■■■■ 34.5
XRCC6P12956 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC23.34■■□□□ 1.332e-6■■■■■ 34.5
XRCC6P12956 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.312e-6■■■■■ 34.5
XRCC6P12956 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC22.85■■□□□ 1.252e-6■■■■■ 34.5
XRCC6P12956 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC22.75■■□□□ 1.232e-6■■■■■ 34.5
XRCC6P12956 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC22.61■■□□□ 1.212e-6■■■■■ 34.5
XRCC6P12956 RPL36-208ENST00000590786 907 ntTSL 222.24■■□□□ 1.152e-6■■■■■ 34.5
XRCC6P12956 RPL36-207ENST00000582463 239 ntTSL 522.2■■□□□ 1.142e-6■■■■■ 34.5
XRCC6P12956 ST3GAL3-225ENST00000489897 998 ntTSL 521.35■■□□□ 1.012e-6■■■■■ 34.5
XRCC6P12956 ST3GAL3-230ENST00000530154 1670 ntTSL 221.22■□□□□ 0.992e-6■■■■■ 34.5
XRCC6P12956 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.91■□□□□ 0.942e-6■■■■■ 34.5
XRCC6P12956 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.882e-6■■■■■ 34.5
XRCC6P12956 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.882e-6■■■■■ 34.5
XRCC6P12956 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.812e-6■■■■■ 34.5
XRCC6P12956 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.85■□□□□ 0.772e-6■■■■■ 34.5
XRCC6P12956 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC18.99■□□□□ 0.632e-6■■■■■ 34.5
XRCC6P12956 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.62e-6■■■■■ 34.5
XRCC6P12956 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC18.8■□□□□ 0.62e-6■■■■■ 34.5
XRCC6P12956 MGAT3-203ENST00000429402 569 ntTSL 418.38■□□□□ 0.532e-6■■■■■ 34.5
XRCC6P12956 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.52e-6■■■■■ 34.5
XRCC6P12956 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.452e-6■■■■■ 34.5
XRCC6P12956 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.412e-6■■■■■ 34.5
XRCC6P12956 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC17.35■□□□□ 0.372e-6■■■■■ 34.5
XRCC6P12956 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.342e-6■■■■■ 34.5
XRCC6P12956 PKLR-203ENST00000434082 580 ntTSL 515.89■□□□□ 0.132e-6■■■■■ 34.5
XRCC6P12956 ST3GAL3-226ENST00000490502 592 ntTSL 315.69■□□□□ 0.12e-6■■■■■ 34.5
XRCC6P12956 ROR2-205ENST00000495386 664 ntTSL 315.56■□□□□ 0.082e-6■■■■■ 34.5
XRCC6P12956 ROR2-201ENST00000375708 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.032e-6■■■■■ 34.5
XRCC6P12956 ROR2-206ENST00000546883 501 ntTSL 314.66□□□□□ -0.062e-6■■■■■ 34.5
XRCC6P12956 ST3GAL3-202ENST00000330208 1479 ntTSL 5 BASIC14.54□□□□□ -0.082e-6■■■■■ 34.5
XRCC6P12956 CLCN3-210ENST00000515420 735 ntTSL 314.29□□□□□ -0.122e-6■■■■■ 34.5
XRCC6P12956 ROR2-204ENST00000493846 370 ntTSL 314.02□□□□□ -0.172e-6■■■■■ 34.5
XRCC6P12956 ZNF700-203ENST00000622593 2901 ntAPPRIS ALT2 TSL 4 BASIC13.94□□□□□ -0.182e-6■■■■■ 34.5
XRCC6P12956 ZNF700-201ENST00000254321 2882 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.192e-6■■■■■ 34.5
XRCC6P12956 ST3GAL3-217ENST00000372369 1038 ntTSL 1 (best) BASIC13.7□□□□□ -0.222e-6■■■■■ 34.5
XRCC6P12956 MGAT3-202ENST00000418314 552 ntTSL 413.66□□□□□ -0.222e-6■■■■■ 34.5
XRCC6P12956 TGFBR1-209ENST00000552516 5933 ntTSL 1 (best) BASIC12.74□□□□□ -0.372e-6■■■■■ 34.5
XRCC6P12956 SNX29-204ENST00000564791 1633 ntTSL 1 (best)12.62□□□□□ -0.392e-6■■■■■ 34.5
XRCC6P12956 RPL36-204ENST00000579446 452 ntTSL 2 BASIC12.03□□□□□ -0.482e-6■■■■■ 34.5
XRCC6P12956 SNX29-205ENST00000566228 8171 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.482e-6■■■■■ 34.5
XRCC6P12956 ST3GAL3-210ENST00000361746 1335 ntTSL 1 (best) BASIC11.85□□□□□ -0.512e-6■■■■■ 34.5
XRCC6P12956 SYDE2-201ENST00000234668 3000 ntTSL 1 (best)11.35□□□□□ -0.592e-6■■■■■ 34.5
XRCC6P12956 ST3GAL3-215ENST00000372367 644 ntTSL 1 (best) BASIC11.31□□□□□ -0.62e-6■■■■■ 34.5
XRCC6P12956 ST3GAL3-229ENST00000528371 599 ntTSL 1 (best) BASIC11.31□□□□□ -0.62e-6■■■■■ 34.5
XRCC6P12956 ST3GAL3-231ENST00000530581 893 ntTSL 1 (best)11.13□□□□□ -0.632e-6■■■■■ 34.5
XRCC6P12956 ST3GAL3-203ENST00000332628 1035 ntTSL 1 (best) BASIC10.87□□□□□ -0.672e-6■■■■■ 34.5
XRCC6P12956 RPL36-205ENST00000579649 449 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.682e-6■■■■■ 34.5
XRCC6P12956 ST3GAL3-216ENST00000372368 1290 ntTSL 1 (best) BASIC10.79□□□□□ -0.682e-6■■■■■ 34.5
XRCC6P12956 ST3GAL3-234ENST00000531993 786 ntTSL 1 (best) BASIC10.67□□□□□ -0.72e-6■■■■■ 34.5
XRCC6P12956 ST3GAL3-214ENST00000372366 670 ntTSL 1 (best) BASIC10.41□□□□□ -0.742e-6■■■■■ 34.5
XRCC6P12956 ST3GAL3-218ENST00000372372 1242 ntTSL 1 (best) BASIC10.41□□□□□ -0.742e-6■■■■■ 34.5
XRCC6P12956 ST3GAL3-238ENST00000533997 1007 ntTSL 1 (best)10.41□□□□□ -0.742e-6■■■■■ 34.5
XRCC6P12956 RN7SKP45-201ENST00000363509 304 ntBASIC10.18□□□□□ -0.782e-6■■■■■ 34.5
XRCC6P12956 ST3GAL3-236ENST00000533212 781 ntTSL 1 (best)10.17□□□□□ -0.782e-6■■■■■ 34.5
XRCC6P12956 ST3GAL3-222ENST00000469715 1160 ntTSL 1 (best)10.17□□□□□ -0.782e-6■■■■■ 34.5
XRCC6P12956 ST3GAL3-227ENST00000490541 976 ntTSL 1 (best)10.17□□□□□ -0.782e-6■■■■■ 34.5
XRCC6P12956 ST3GAL3-211ENST00000361812 513 ntTSL 1 (best) BASIC9.84□□□□□ -0.832e-6■■■■■ 34.5
XRCC6P12956 ST3GAL3-237ENST00000533933 834 ntTSL 1 (best) BASIC9.73□□□□□ -0.852e-6■■■■■ 34.5
XRCC6P12956 AC008770.3-203ENST00000591441 677 ntTSL 39.67□□□□□ -0.862e-6■■■■■ 34.5
XRCC6P12956 ST3GAL3-213ENST00000372365 673 ntTSL 1 (best) BASIC9.45□□□□□ -0.92e-6■■■■■ 34.5
XRCC6P12956 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.92e-6■■■■■ 34.5
XRCC6P12956 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC8.89□□□□□ -0.992e-6■■■■■ 34.5
XRCC6P12956 ST3GAL3-221ENST00000461375 806 ntTSL 58.56□□□□□ -1.042e-6■■■■■ 34.5
XRCC6P12956 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC8.12□□□□□ -1.112e-6■■■■■ 34.5
XRCC6P12956 CLCN3-206ENST00000507875 2485 ntTSL 28.04□□□□□ -1.122e-6■■■■■ 34.5
XRCC6P12956 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC7.57□□□□□ -1.22e-6■■■■■ 34.5
XRCC6P12956 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC7.33□□□□□ -1.242e-6■■■■■ 34.5
Retrieved 100 of 6,788 protein–RNA pairs in 203.1 ms