RNA–Protein interactions for RNA: ENST00000566228.5

SNX29-205, Transcript of sorting nexin 29, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNX29, Length 8,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-205ENST00000566228 PELP1Q8IZL8 1130 aaKnown RBP17.91■□□□□ 0.46
SNX29-205ENST00000566228 DCAF8L2P0C7V8 631 aa17.18■□□□□ 0.34
SNX29-205ENST00000566228 CCER1Q8TC90 406 aaPredicted RBP17.05■□□□□ 0.32
SNX29-205ENST00000566228 FAM9AQ8IZU1 332 aaPredicted RBP16.99■□□□□ 0.31
SNX29-205ENST00000566228 ERICH6Q7L0X2 663 aa16.81■□□□□ 0.28
SNX29-205ENST00000566228 MYT1Q01538 1121 aa16.72■□□□□ 0.27
SNX29-205ENST00000566228 APLP2Q06481 763 aa16.64■□□□□ 0.25
SNX29-205ENST00000566228 YTHDC1Q96MU7 727 aaKnown RBP16.6■□□□□ 0.25
SNX29-205ENST00000566228 CENPBP07199 599 aaPredicted RBP16.33■□□□□ 0.2
SNX29-205ENST00000566228 NEFLP07196 543 aa16.21■□□□□ 0.19
SNX29-205ENST00000566228 DAXXQ9UER7 740 aaPredicted RBP16.14■□□□□ 0.17
SNX29-205ENST00000566228 SUPT5HO00267 1087 aaKnown RBP16.04■□□□□ 0.16
SNX29-205ENST00000566228 ZEB1P37275 1124 aaPredicted RBP16.04■□□□□ 0.16
SNX29-205ENST00000566228 NISCHQ9Y2I1 1504 aa15.89■□□□□ 0.13
SNX29-205ENST00000566228 TTBK1Q5TCY1 1321 aaPredicted RBP15.79■□□□□ 0.12
SNX29-205ENST00000566228 EHMT2Q96KQ7 1210 aa15.59■□□□□ 0.09
SNX29-205ENST00000566228 ZNF316A6NFI3 1004 aaPredicted RBP15.58■□□□□ 0.08
SNX29-205ENST00000566228 RTL5Q5HYW3 569 aaPredicted RBP15.56■□□□□ 0.08
SNX29-205ENST00000566228 SHROOM4Q9ULL8 1493 aa15.53■□□□□ 0.08
SNX29-205ENST00000566228 PCGF6Q9BYE7 350 aa15.53■□□□□ 0.08
SNX29-205ENST00000566228 ATP1B4Q9UN42 357 aaPredicted RBP15.49■□□□□ 0.07
SNX29-205ENST00000566228 CLSPNQ9HAW4 1339 aa15.38■□□□□ 0.05
SNX29-205ENST00000566228 ZBTB47Q9UFB7 747 aaPredicted RBP15.35■□□□□ 0.05
SNX29-205ENST00000566228 MYT1LQ9UL68 1186 aa15.31■□□□□ 0.04
SNX29-205ENST00000566228 NEFMP07197 916 aa15.27■□□□□ 0.03
SNX29-205ENST00000566228 UBTFP17480 764 aaKnown RBP15.23■□□□□ 0.03
SNX29-205ENST00000566228 TRIM41Q8WV44 630 aa15.13■□□□□ 0.01
SNX29-205ENST00000566228 ANP32BQ92688 251 aaKnown RBP15.13■□□□□ 0.01
SNX29-205ENST00000566228 GLIPR1L2Q4G1C9 344 aa15.13■□□□□ 0.01
SNX29-205ENST00000566228 SLC4A1APQ9BWU0 796 aaKnown RBP15.11■□□□□ 0.01
SNX29-205ENST00000566228 RANGAP1P46060 587 aaPredicted RBP15.1■□□□□ 0.01
SNX29-205ENST00000566228 POLR3GLQ9BT43 218 aa15.06■□□□□ 0
SNX29-205ENST00000566228 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.96□□□□□ -0.01
SNX29-205ENST00000566228 HNRNPUL2Q1KMD3 747 aaKnown RBP14.96□□□□□ -0.01
SNX29-205ENST00000566228 CDK11BP21127 795 aaKnown RBP14.96□□□□□ -0.01
SNX29-205ENST00000566228 CDK11AQ9UQ88 783 aaPredicted RBP14.96□□□□□ -0.01
SNX29-205ENST00000566228 CANXP27824 592 aaKnown RBP14.8□□□□□ -0.04
SNX29-205ENST00000566228 TRIM26Q12899 539 aaPredicted RBP14.79□□□□□ -0.04
SNX29-205ENST00000566228 ANP32AP39687 249 aaKnown RBP14.76□□□□□ -0.05
SNX29-205ENST00000566228 UPF2Q9HAU5 1272 aaKnown RBP14.75□□□□□ -0.05
SNX29-205ENST00000566228 SLC24A1O60721 1099 aa14.74□□□□□ -0.05
SNX29-205ENST00000566228 HSP90AA1P07900 732 aaKnown RBP14.74□□□□□ -0.05
SNX29-205ENST00000566228 CHIC1Q5VXU3 224 aa14.72□□□□□ -0.05
SNX29-205ENST00000566228 TNNT2P45379 298 aaPredicted RBP14.65□□□□□ -0.06
SNX29-205ENST00000566228 ITGAEP38570 1179 aa14.62□□□□□ -0.07
SNX29-205ENST00000566228 ABCC9O60706 1549 aa14.61□□□□□ -0.07
SNX29-205ENST00000566228 ANP32CO43423 234 aa14.61□□□□□ -0.07
SNX29-205ENST00000566228 CNGB1Q14028 1251 aaPredicted RBP14.57□□□□□ -0.08
SNX29-205ENST00000566228 HRCP23327 699 aa14.55□□□□□ -0.08
SNX29-205ENST00000566228 EIF5BO60841 1220 aaKnown RBP14.54□□□□□ -0.08
SNX29-205ENST00000566228 ANP32EQ9BTT0 268 aa14.54□□□□□ -0.08
SNX29-205ENST00000566228 BCANQ96GW7 911 aa14.5□□□□□ -0.09
SNX29-205ENST00000566228 DIEXFQ68CQ4 756 aaKnown RBP14.47□□□□□ -0.09
SNX29-205ENST00000566228 TRIM44Q96DX7 344 aaPredicted RBP14.46□□□□□ -0.09
SNX29-205ENST00000566228 PABPN1Q86U42 306 aaKnown RBP eCLIP14.45□□□□□ -0.1
SNX29-205ENST00000566228 TRIM52Q96A61 297 aa14.45□□□□□ -0.1
SNX29-205ENST00000566228 ESF1Q9H501 851 aaKnown RBP14.44□□□□□ -0.1
SNX29-205ENST00000566228 NPM2Q86SE8 214 aaKnown RBP14.41□□□□□ -0.1
SNX29-205ENST00000566228 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.4□□□□□ -0.1
SNX29-205ENST00000566228 ZRSR1Q15695 479 aaKnown RBP14.39□□□□□ -0.11
SNX29-205ENST00000566228 NCLP19338 710 aaKnown RBP14.38□□□□□ -0.11
SNX29-205ENST00000566228 FAM50AQ14320 339 aaKnown RBP14.36□□□□□ -0.11
SNX29-205ENST00000566228 BCL11AQ9H165 835 aa14.35□□□□□ -0.11
SNX29-205ENST00000566228 MYH16Q9H6N6 1097 aa14.35□□□□□ -0.11
SNX29-205ENST00000566228 L1TD1Q5T7N2 865 aaKnown RBP14.35□□□□□ -0.11
SNX29-205ENST00000566228 GOLGA6L22H0YM25 854 aa14.32□□□□□ -0.12
SNX29-205ENST00000566228 NRDCO43847 1150 aa14.3□□□□□ -0.12
SNX29-205ENST00000566228 GOLGA6L6A8MZA4 724 aa14.28□□□□□ -0.12
SNX29-205ENST00000566228 BECN1Q14457 450 aa14.24□□□□□ -0.13
SNX29-205ENST00000566228 ZNF326Q5BKZ1 582 aaKnown RBP14.23□□□□□ -0.13
SNX29-205ENST00000566228 STAG3Q9UJ98 1225 aa14.21□□□□□ -0.14
SNX29-205ENST00000566228 PPARGC1BQ86YN6 1023 aaKnown RBP14.2□□□□□ -0.14
SNX29-205ENST00000566228 CASC1Q6TDU7 716 aa14.17□□□□□ -0.14
SNX29-205ENST00000566228 NEUROD1Q13562 356 aa14.17□□□□□ -0.14
SNX29-205ENST00000566228 DDRGK1Q96HY6 314 aa14.16□□□□□ -0.14
SNX29-205ENST00000566228 USP35Q9P2H5 1018 aa14.14□□□□□ -0.15
SNX29-205ENST00000566228 FBLN2P98095 1184 aa14.13□□□□□ -0.15
SNX29-205ENST00000566228 PTMAP06454 111 aaKnown RBP14.1□□□□□ -0.15
SNX29-205ENST00000566228 ACIN1Q9UKV3 1341 aaKnown RBP14.1□□□□□ -0.15
SNX29-205ENST00000566228 DNTTIP2Q5QJE6 756 aaKnown RBP14.09□□□□□ -0.15
SNX29-205ENST00000566228 CHAF1AQ13111 956 aaPredicted RBP14.09□□□□□ -0.15
SNX29-205ENST00000566228 ERICH6BQ5W0A0 696 aa14.08□□□□□ -0.16
SNX29-205ENST00000566228 CHMP4BQ9H444 224 aaKnown RBP14.04□□□□□ -0.16
SNX29-205ENST00000566228 KIAA2012Q0VF49 1180 aa14.04□□□□□ -0.16
SNX29-205ENST00000566228 WDR43Q15061 677 aaKnown RBP eCLIP14.04□□□□□ -0.16
SNX29-205ENST00000566228 GTF3C3Q9Y5Q9 886 aa14.04□□□□□ -0.16
SNX29-205ENST00000566228 CCDC136Q96JN2 1154 aa14.01□□□□□ -0.17
SNX29-205ENST00000566228 NPM1P06748 294 aaKnown RBP eCLIP14□□□□□ -0.17
SNX29-205ENST00000566228 CFAP44Q96MT7 982 aa13.98□□□□□ -0.17
SNX29-205ENST00000566228 EIF4G2P78344 907 aaKnown RBP eCLIP13.98□□□□□ -0.174e-7■■■■■ 52.2
SNX29-205ENST00000566228 TMC1Q8TDI8 760 aa13.96□□□□□ -0.17
SNX29-205ENST00000566228 TONSLQ96HA7 1378 aa13.95□□□□□ -0.18
SNX29-205ENST00000566228 A0A0G2JS52 829 aa13.91□□□□□ -0.18
SNX29-205ENST00000566228 PNNQ9H307 717 aaKnown RBP13.91□□□□□ -0.18
SNX29-205ENST00000566228 SCAF1Q9H7N4 1312 aaKnown RBP13.9□□□□□ -0.18
SNX29-205ENST00000566228 PLPPR3Q6T4P5 718 aa13.9□□□□□ -0.18
SNX29-205ENST00000566228 NOC3LQ8WTT2 800 aaKnown RBP13.89□□□□□ -0.19
SNX29-205ENST00000566228 GOLGA2Q08379 1002 aa13.89□□□□□ -0.19
SNX29-205ENST00000566228 NPHP1O15259 732 aa13.88□□□□□ -0.19
SNX29-205ENST00000566228 CCDC34Q96HJ3 373 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms