RNA–Protein interactions for RNA: ENST00000484804.5

GGA1-220, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 3

Gene GGA1, Length 449 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-220ENST00000484804 NISCHQ9Y2I1 1504 aa35.19■■■■□ 3.22
GGA1-220ENST00000484804 ABCC9O60706 1549 aa33.09■■■□□ 2.89
GGA1-220ENST00000484804 CCDC180Q9P1Z9 1646 aa31.93■■■□□ 2.7
GGA1-220ENST00000484804 DNAJC5BQ9UF47 199 aa31.88■■■□□ 2.69
GGA1-220ENST00000484804 RB1CC1Q8TDY2 1594 aa30.96■■■□□ 2.55
GGA1-220ENST00000484804 PABPN1Q86U42 306 aaKnown RBP eCLIP30.72■■■□□ 2.51
GGA1-220ENST00000484804 NACADO15069 1562 aa30.48■■■□□ 2.47
GGA1-220ENST00000484804 DCAF8L2P0C7V8 631 aa30.44■■■□□ 2.46
GGA1-220ENST00000484804 UNC13AQ9UPW8 1703 aa30.13■■■□□ 2.41
GGA1-220ENST00000484804 BICRAQ9NZM4 1560 aa30.03■■■□□ 2.4
GGA1-220ENST00000484804 DNAJC5Q9H3Z4 198 aa30■■■□□ 2.39
GGA1-220ENST00000484804 CECR2Q9BXF3 1484 aa29.89■■■□□ 2.38
GGA1-220ENST00000484804 CC2D2AQ9P2K1 1620 aa29.74■■■□□ 2.35
GGA1-220ENST00000484804 MYO15BQ96JP2 1530 aa29.65■■■□□ 2.34
GGA1-220ENST00000484804 SHROOM4Q9ULL8 1493 aa29.51■■■□□ 2.31
GGA1-220ENST00000484804 EIF4G1Q04637 1599 aaKnown RBP29.43■■■□□ 2.3
GGA1-220ENST00000484804 SCRIBQ14160 1630 aa29.19■■■□□ 2.26
GGA1-220ENST00000484804 ZCCHC6Q5VYS8 1495 aaKnown RBP28.93■■■□□ 2.22
GGA1-220ENST00000484804 DCAF1Q9Y4B6 1507 aa28.92■■■□□ 2.22
GGA1-220ENST00000484804 CUX2O14529 1486 aa28.85■■■□□ 2.21
GGA1-220ENST00000484804 ERCC6Q03468 1493 aa28.7■■■□□ 2.18
GGA1-220ENST00000484804 TRIM41Q8WV44 630 aa28.46■■■□□ 2.15
GGA1-220ENST00000484804 NCAPD3P42695 1498 aa28.15■■■□□ 2.1
GGA1-220ENST00000484804 NESP48681 1621 aa28.1■■■□□ 2.09
GGA1-220ENST00000484804 ATAD2BQ9ULI0 1458 aa27.96■■■□□ 2.07
GGA1-220ENST00000484804 THOC2Q8NI27 1593 aaKnown RBP27.92■■■□□ 2.06
GGA1-220ENST00000484804 SMARCA2P51531 1590 aa27.85■■■□□ 2.05
GGA1-220ENST00000484804 HMGXB3Q12766 1538 aa27.84■■■□□ 2.05
GGA1-220ENST00000484804 BAZ1BQ9UIG0 1483 aaKnown RBP27.7■■■□□ 2.02
GGA1-220ENST00000484804 LAMC3Q9Y6N6 1575 aa27.68■■■□□ 2.02
GGA1-220ENST00000484804 SMARCA4P51532 1647 aa27.65■■■□□ 2.02
GGA1-220ENST00000484804 PDS5BQ9NTI5 1447 aa27.65■■■□□ 2.02
GGA1-220ENST00000484804 KIF21AQ7Z4S6 1674 aa27.63■■■□□ 2.01
GGA1-220ENST00000484804 OSCARQ8IYS5 282 aa27.47■■□□□ 1.99
GGA1-220ENST00000484804 BAZ1AQ9NRL2 1556 aaPredicted RBP27.45■■□□□ 1.99
GGA1-220ENST00000484804 MRC2Q9UBG0 1479 aa27.44■■□□□ 1.98
GGA1-220ENST00000484804 WDR62O43379 1518 aa27.33■■□□□ 1.97
GGA1-220ENST00000484804 CADPSQ9ULU8 1353 aa27.32■■□□□ 1.96
GGA1-220ENST00000484804 PEG3Q9GZU2 1588 aa27.31■■□□□ 1.96
GGA1-220ENST00000484804 CEP164Q9UPV0 1460 aa27.15■■□□□ 1.94
GGA1-220ENST00000484804 MROH2BQ7Z745 1585 aa27.13■■□□□ 1.93
GGA1-220ENST00000484804 RIMBP3CA6NJZ7 1639 aa27.12■■□□□ 1.93
GGA1-220ENST00000484804 RIMBP3BA6NNM3 1639 aa27.12■■□□□ 1.93
GGA1-220ENST00000484804 RIMBP3Q9UFD9 1639 aa27.12■■□□□ 1.93
GGA1-220ENST00000484804 TRHP20396 242 aaPredicted RBP27.05■■□□□ 1.92
GGA1-220ENST00000484804 FANCD2Q9BXW9 1451 aa27.03■■□□□ 1.92
GGA1-220ENST00000484804 AEBP2Q6ZN18 517 aaPredicted RBP27.02■■□□□ 1.92
GGA1-220ENST00000484804 CYB5RLQ6IPT4 315 aa26.95■■□□□ 1.9
GGA1-220ENST00000484804 ARHGEF11O15085 1522 aa26.95■■□□□ 1.9
GGA1-220ENST00000484804 URB2Q14146 1524 aaKnown RBP26.83■■□□□ 1.89
GGA1-220ENST00000484804 CFTRP13569 1480 aa26.74■■□□□ 1.87
GGA1-220ENST00000484804 WIZO95785 1651 aa26.74■■□□□ 1.87
GGA1-220ENST00000484804 ZNF608Q9ULD9 1512 aaPredicted RBP26.69■■□□□ 1.86
GGA1-220ENST00000484804 ARAP1Q96P48 1450 aa26.62■■□□□ 1.85
GGA1-220ENST00000484804 IFT140Q96RY7 1462 aa26.62■■□□□ 1.85
GGA1-220ENST00000484804 FBLN2P98095 1184 aa26.55■■□□□ 1.84
GGA1-220ENST00000484804 EIF4G3O43432 1585 aaKnown RBP26.45■■□□□ 1.82
GGA1-220ENST00000484804 RSF1Q96T23 1441 aaPredicted RBP26.44■■□□□ 1.82
GGA1-220ENST00000484804 CHD1O14646 1710 aa26.42■■□□□ 1.82
GGA1-220ENST00000484804 TOPBP1Q92547 1522 aa26.37■■□□□ 1.81
GGA1-220ENST00000484804 AQRO60306 1485 aaKnown RBP eCLIP26.36■■□□□ 1.81
GGA1-220ENST00000484804 TOP2AP11388 1531 aaKnown RBP26.34■■□□□ 1.81
GGA1-220ENST00000484804 PRDM2Q13029 1718 aa26.3■■□□□ 1.8
GGA1-220ENST00000484804 ABCC8Q09428 1581 aa26.23■■□□□ 1.79
GGA1-220ENST00000484804 DNMBPQ6XZF7 1577 aa26.16■■□□□ 1.78
GGA1-220ENST00000484804 TARBP1Q13395 1621 aaKnown RBP26.14■■□□□ 1.78
GGA1-220ENST00000484804 CHMP7Q8WUX9 453 aaPredicted RBP26.12■■□□□ 1.77
GGA1-220ENST00000484804 CCDC88BA6NC98 1476 aa26.09■■□□□ 1.77
GGA1-220ENST00000484804 CLASP1Q7Z460 1538 aa26.08■■□□□ 1.77
GGA1-220ENST00000484804 TDRD9Q8NDG6 1382 aaKnown RBP26.07■■□□□ 1.76
GGA1-220ENST00000484804 SNAPC4Q5SXM2 1469 aa26.05■■□□□ 1.76
GGA1-220ENST00000484804 SYNJ1O43426 1573 aa26.04■■□□□ 1.76
GGA1-220ENST00000484804 POLA1P09884 1462 aaPredicted RBP26.04■■□□□ 1.76
GGA1-220ENST00000484804 RAD54L2Q9Y4B4 1467 aa26.01■■□□□ 1.75
GGA1-220ENST00000484804 GAPVD1Q14C86 1478 aa25.98■■□□□ 1.75
GGA1-220ENST00000484804 SOGA1O94964 1423 aa25.97■■□□□ 1.75
GGA1-220ENST00000484804 MAGI1Q96QZ7 1491 aaPredicted RBP25.89■■□□□ 1.73
GGA1-220ENST00000484804 ILDR1Q86SU0 546 aaPredicted RBP25.87■■□□□ 1.73
GGA1-220ENST00000484804 SYNJ2O15056 1496 aa25.84■■□□□ 1.73
GGA1-220ENST00000484804 GRIN2BQ13224 1484 aa25.82■■□□□ 1.72
GGA1-220ENST00000484804 WDR97A6NE52 1622 aa25.78■■□□□ 1.72
GGA1-220ENST00000484804 FGD5Q6ZNL6 1462 aa25.76■■□□□ 1.71
GGA1-220ENST00000484804 ERCC6L2Q5T890 1561 aa25.65■■□□□ 1.7
GGA1-220ENST00000484804 PBRM1Q86U86 1689 aa25.58■■□□□ 1.68
GGA1-220ENST00000484804 KDM4FA0A1W2PPD8 638 aa25.56■■□□□ 1.68
GGA1-220ENST00000484804 KIF13AQ9H1H9 1805 aa25.54■■□□□ 1.68
GGA1-220ENST00000484804 CUX1P39880 1505 aa25.54■■□□□ 1.68
GGA1-220ENST00000484804 SUPT5HO00267 1087 aaKnown RBP25.53■■□□□ 1.68
GGA1-220ENST00000484804 FAM69CQ0P6D2 419 aa25.53■■□□□ 1.68
GGA1-220ENST00000484804 CEP170Q5SW79 1584 aa25.51■■□□□ 1.67
GGA1-220ENST00000484804 GRIN2AQ12879 1464 aa25.47■■□□□ 1.67
GGA1-220ENST00000484804 NPM1P06748 294 aaKnown RBP eCLIP25.41■■□□□ 1.66
GGA1-220ENST00000484804 NUP160Q12769 1436 aa25.38■■□□□ 1.65
GGA1-220ENST00000484804 ABCA5Q8WWZ7 1642 aa25.37■■□□□ 1.65
GGA1-220ENST00000484804 ABCC10Q5T3U5 1492 aa25.37■■□□□ 1.65
GGA1-220ENST00000484804 ABCA10Q8WWZ4 1543 aa25.37■■□□□ 1.65
GGA1-220ENST00000484804 KDM6BO15054 1643 aa25.35■■□□□ 1.65
GGA1-220ENST00000484804 PRG4Q92954 1404 aaPredicted RBP25.32■■□□□ 1.64
GGA1-220ENST00000484804 SHROOM2Q13796 1616 aa25.32■■□□□ 1.64
GGA1-220ENST00000484804 ADAMTS12P58397 1594 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms