RNA–Protein interactions for RNA: ENST00000411501.5

GGA1-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 3

Gene GGA1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-207ENST00000411501 NISCHQ9Y2I1 1504 aa45.86■■■■■ 4.93
GGA1-207ENST00000411501 ABCC9O60706 1549 aa41.82■■■■■ 4.29
GGA1-207ENST00000411501 CCDC180Q9P1Z9 1646 aa41.4■■■■■ 4.22
GGA1-207ENST00000411501 DNAJC5BQ9UF47 199 aa39.62■■■■□ 3.93
GGA1-207ENST00000411501 RB1CC1Q8TDY2 1594 aa39.59■■■■□ 3.93
GGA1-207ENST00000411501 NACADO15069 1562 aa39.2■■■■□ 3.87
GGA1-207ENST00000411501 DCAF8L2P0C7V8 631 aa38.82■■■■□ 3.8
GGA1-207ENST00000411501 UNC13AQ9UPW8 1703 aa38.82■■■■□ 3.8
GGA1-207ENST00000411501 PABPN1Q86U42 306 aaKnown RBP eCLIP38.81■■■■□ 3.88e-11■□□□□ 10.1
GGA1-207ENST00000411501 BICRAQ9NZM4 1560 aa38.52■■■■□ 3.76
GGA1-207ENST00000411501 MYO15BQ96JP2 1530 aa38.49■■■■□ 3.75
GGA1-207ENST00000411501 ZCCHC6Q5VYS8 1495 aaKnown RBP37.94■■■■□ 3.66
GGA1-207ENST00000411501 SHROOM4Q9ULL8 1493 aa37.86■■■■□ 3.65
GGA1-207ENST00000411501 DCAF1Q9Y4B6 1507 aa37.84■■■■□ 3.65
GGA1-207ENST00000411501 CC2D2AQ9P2K1 1620 aa37.78■■■■□ 3.64
GGA1-207ENST00000411501 SCRIBQ14160 1630 aa37.7■■■■□ 3.63
GGA1-207ENST00000411501 CECR2Q9BXF3 1484 aa37.7■■■■□ 3.63
GGA1-207ENST00000411501 EIF4G1Q04637 1599 aaKnown RBP37.58■■■■□ 3.61
GGA1-207ENST00000411501 DNAJC5Q9H3Z4 198 aa36.66■■■■□ 3.46
GGA1-207ENST00000411501 CUX2O14529 1486 aa36.21■■■■□ 3.39
GGA1-207ENST00000411501 NCAPD3P42695 1498 aa36.18■■■■□ 3.38
GGA1-207ENST00000411501 ERCC6Q03468 1493 aa36.11■■■■□ 3.37
GGA1-207ENST00000411501 ATAD2BQ9ULI0 1458 aa36.02■■■■□ 3.36
GGA1-207ENST00000411501 SMARCA4P51532 1647 aa35.92■■■■□ 3.34
GGA1-207ENST00000411501 HMGXB3Q12766 1538 aa35.91■■■■□ 3.34
GGA1-207ENST00000411501 SMARCA2P51531 1590 aa35.89■■■■□ 3.34
GGA1-207ENST00000411501 NESP48681 1621 aa35.82■■■■□ 3.32
GGA1-207ENST00000411501 BAZ1BQ9UIG0 1483 aaKnown RBP35.65■■■■□ 3.3
GGA1-207ENST00000411501 BAZ1AQ9NRL2 1556 aaPredicted RBP35.63■■■■□ 3.29
GGA1-207ENST00000411501 THOC2Q8NI27 1593 aaKnown RBP35.59■■■■□ 3.29
GGA1-207ENST00000411501 PEG3Q9GZU2 1588 aa35.55■■■■□ 3.28
GGA1-207ENST00000411501 LAMC3Q9Y6N6 1575 aa35.47■■■■□ 3.27
GGA1-207ENST00000411501 KIF21AQ7Z4S6 1674 aa35.39■■■■□ 3.26
GGA1-207ENST00000411501 MROH2BQ7Z745 1585 aa35.36■■■■□ 3.25
GGA1-207ENST00000411501 PDS5BQ9NTI5 1447 aa35.22■■■■□ 3.23
GGA1-207ENST00000411501 CADPSQ9ULU8 1353 aa35.03■■■■□ 3.2
GGA1-207ENST00000411501 MRC2Q9UBG0 1479 aa34.99■■■■□ 3.19
GGA1-207ENST00000411501 WDR62O43379 1518 aa34.96■■■■□ 3.19
GGA1-207ENST00000411501 WIZO95785 1651 aa34.94■■■■□ 3.18
GGA1-207ENST00000411501 TRIM41Q8WV44 630 aa34.88■■■■□ 3.17
GGA1-207ENST00000411501 CEP164Q9UPV0 1460 aa34.76■■■■□ 3.15
GGA1-207ENST00000411501 FANCD2Q9BXW9 1451 aa34.68■■■■□ 3.14
GGA1-207ENST00000411501 CFTRP13569 1480 aa34.58■■■■□ 3.13
GGA1-207ENST00000411501 URB2Q14146 1524 aaKnown RBP34.45■■■■□ 3.11
GGA1-207ENST00000411501 TOP2AP11388 1531 aaKnown RBP34.43■■■■□ 3.1
GGA1-207ENST00000411501 RSF1Q96T23 1441 aaPredicted RBP34.42■■■■□ 3.1
GGA1-207ENST00000411501 OSCARQ8IYS5 282 aa34.4■■■■□ 3.1
GGA1-207ENST00000411501 PRDM2Q13029 1718 aa34.29■■■■□ 3.08
GGA1-207ENST00000411501 RIMBP3CA6NJZ7 1639 aa34.14■■■■□ 3.06
GGA1-207ENST00000411501 RIMBP3BA6NNM3 1639 aa34.14■■■■□ 3.06
GGA1-207ENST00000411501 RIMBP3Q9UFD9 1639 aa34.14■■■■□ 3.06
GGA1-207ENST00000411501 ZNF608Q9ULD9 1512 aaPredicted RBP34.1■■■■□ 3.05
GGA1-207ENST00000411501 IFT140Q96RY7 1462 aa34.06■■■■□ 3.04
GGA1-207ENST00000411501 CCDC88BA6NC98 1476 aa34.02■■■■□ 3.04
GGA1-207ENST00000411501 TOPBP1Q92547 1522 aa33.99■■■■□ 3.03
GGA1-207ENST00000411501 ARHGEF11O15085 1522 aa33.96■■■■□ 3.03
GGA1-207ENST00000411501 EIF4G3O43432 1585 aaKnown RBP33.93■■■■□ 3.02
GGA1-207ENST00000411501 DNMBPQ6XZF7 1577 aa33.82■■■■□ 3
GGA1-207ENST00000411501 ABCC8Q09428 1581 aa33.81■■■■□ 3
GGA1-207ENST00000411501 CHD1O14646 1710 aa33.79■■■■□ 3
GGA1-207ENST00000411501 TARBP1Q13395 1621 aaKnown RBP33.75■■■□□ 2.99
GGA1-207ENST00000411501 AQRO60306 1485 aaKnown RBP eCLIP33.7■■■□□ 2.99
GGA1-207ENST00000411501 CYB5RLQ6IPT4 315 aa33.66■■■□□ 2.98
GGA1-207ENST00000411501 POLA1P09884 1462 aaPredicted RBP33.62■■■□□ 2.97
GGA1-207ENST00000411501 ARAP1Q96P48 1450 aa33.61■■■□□ 2.97
GGA1-207ENST00000411501 FBLN2P98095 1184 aa33.51■■■□□ 2.95
GGA1-207ENST00000411501 RAD54L2Q9Y4B4 1467 aa33.5■■■□□ 2.95
GGA1-207ENST00000411501 TRHP20396 242 aaPredicted RBP33.42■■■□□ 2.94
GGA1-207ENST00000411501 TDRD9Q8NDG6 1382 aaKnown RBP33.41■■■□□ 2.94
GGA1-207ENST00000411501 SOGA1O94964 1423 aa33.4■■■□□ 2.94
GGA1-207ENST00000411501 SNAPC4Q5SXM2 1469 aa33.37■■■□□ 2.93
GGA1-207ENST00000411501 CLASP1Q7Z460 1538 aa33.35■■■□□ 2.93
GGA1-207ENST00000411501 FGD5Q6ZNL6 1462 aa33.33■■■□□ 2.93
GGA1-207ENST00000411501 WDR97A6NE52 1622 aa33.33■■■□□ 2.93
GGA1-207ENST00000411501 CUX1P39880 1505 aa33.25■■■□□ 2.91
GGA1-207ENST00000411501 SYNJ1O43426 1573 aa33.25■■■□□ 2.91
GGA1-207ENST00000411501 MAGI1Q96QZ7 1491 aaPredicted RBP33.24■■■□□ 2.91
GGA1-207ENST00000411501 CHMP7Q8WUX9 453 aaPredicted RBP33.18■■■□□ 2.9
GGA1-207ENST00000411501 GRIN2BQ13224 1484 aa33.18■■■□□ 2.9
GGA1-207ENST00000411501 SYNJ2O15056 1496 aa33.13■■■□□ 2.89
GGA1-207ENST00000411501 PBRM1Q86U86 1689 aa33.11■■■□□ 2.89
GGA1-207ENST00000411501 GAPVD1Q14C86 1478 aa33.01■■■□□ 2.88
GGA1-207ENST00000411501 ABCA5Q8WWZ7 1642 aa32.96■■■□□ 2.87
GGA1-207ENST00000411501 ABCA10Q8WWZ4 1543 aa32.92■■■□□ 2.86
GGA1-207ENST00000411501 ERCC6L2Q5T890 1561 aa32.82■■■□□ 2.84
GGA1-207ENST00000411501 GRIN2AQ12879 1464 aa32.78■■■□□ 2.84
GGA1-207ENST00000411501 AEBP2Q6ZN18 517 aaPredicted RBP32.75■■■□□ 2.83
GGA1-207ENST00000411501 ADAMTS12P58397 1594 aa32.75■■■□□ 2.83
GGA1-207ENST00000411501 CEP170Q5SW79 1584 aa32.73■■■□□ 2.83
GGA1-207ENST00000411501 NUP160Q12769 1436 aa32.68■■■□□ 2.82
GGA1-207ENST00000411501 WRNQ14191 1432 aaPredicted RBP eCLIP32.66■■■□□ 2.82
GGA1-207ENST00000411501 SHROOM2Q13796 1616 aa32.63■■■□□ 2.81
GGA1-207ENST00000411501 BIVM-ERCC5R4GMW8 1640 aa32.62■■■□□ 2.81
GGA1-207ENST00000411501 TOP2BQ02880 1626 aa32.59■■■□□ 2.81
GGA1-207ENST00000411501 FHAD1B1AJZ9 1412 aa32.55■■■□□ 2.8
GGA1-207ENST00000411501 SUPT5HO00267 1087 aaKnown RBP32.5■■■□□ 2.79
GGA1-207ENST00000411501 KIF13AQ9H1H9 1805 aa32.49■■■□□ 2.79
GGA1-207ENST00000411501 ERICH3Q5RHP9 1530 aa32.49■■■□□ 2.79
GGA1-207ENST00000411501 PRG4Q92954 1404 aaPredicted RBP32.38■■■□□ 2.77
GGA1-207ENST00000411501 RUSC2Q8N2Y8 1516 aa32.31■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms