RNA–Protein interactions for RNA: ENST00000606161.1

ZEB1-224, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 3

Gene ZEB1, Length 482 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-224ENST00000606161 AEBP2Q6ZN18 517 aaPredicted RBP18.93■□□□□ 0.62
ZEB1-224ENST00000606161 CHIC1Q5VXU3 224 aa18.01■□□□□ 0.47
ZEB1-224ENST00000606161 SENP3Q9H4L4 574 aaPredicted RBP15.99■□□□□ 0.15
ZEB1-224ENST00000606161 PHF23Q9BUL5 403 aaPredicted RBP15.86■□□□□ 0.13
ZEB1-224ENST00000606161 FOXD1Q16676 465 aa14.97□□□□□ -0.01
ZEB1-224ENST00000606161 PLPPR3Q6T4P5 718 aa14.39□□□□□ -0.11
ZEB1-224ENST00000606161 PPP6R1Q9UPN7 881 aa14.12□□□□□ -0.15
ZEB1-224ENST00000606161 ADRA2BP18089 450 aa14.05□□□□□ -0.16
ZEB1-224ENST00000606161 PIAS4Q8N2W9 510 aaPredicted RBP13.97□□□□□ -0.17
ZEB1-224ENST00000606161 MSH5O43196 834 aa13.87□□□□□ -0.19
ZEB1-224ENST00000606161 POTEDQ86YR6 584 aa13.42□□□□□ -0.26
ZEB1-224ENST00000606161 MAPK8IP2Q13387 824 aaPredicted RBP12.89□□□□□ -0.35
ZEB1-224ENST00000606161 DMRT2Q9Y5R5 561 aa12.74□□□□□ -0.37
ZEB1-224ENST00000606161 SCAF1Q9H7N4 1312 aaKnown RBP12.71□□□□□ -0.37
ZEB1-224ENST00000606161 PPP4R3CPQ6ZMV5 832 aa12.66□□□□□ -0.38
ZEB1-224ENST00000606161 CNKSR2Q8WXI2 1034 aa12.37□□□□□ -0.43
ZEB1-224ENST00000606161 HOXD11P31277 338 aaPredicted RBP12.33□□□□□ -0.44
ZEB1-224ENST00000606161 RNF216Q9NWF9 866 aaPredicted RBP12.23□□□□□ -0.45
ZEB1-224ENST00000606161 DCAF8L1A6NGE4 600 aa12.15□□□□□ -0.46
ZEB1-224ENST00000606161 NCBP3Q53F19 620 aaKnown RBP12.11□□□□□ -0.47
ZEB1-224ENST00000606161 NPM3O75607 178 aaKnown RBP12.06□□□□□ -0.48
ZEB1-224ENST00000606161 KCNA4P22459 653 aa11.95□□□□□ -0.5
ZEB1-224ENST00000606161 RNF39Q9H2S5 420 aa11.91□□□□□ -0.5
ZEB1-224ENST00000606161 CACNB1Q02641 598 aaPredicted RBP11.83□□□□□ -0.52
ZEB1-224ENST00000606161 DNAJC5BQ9UF47 199 aa11.83□□□□□ -0.52
ZEB1-224ENST00000606161 C1QBPQ07021 282 aaKnown RBP11.68□□□□□ -0.54
ZEB1-224ENST00000606161 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.67□□□□□ -0.54
ZEB1-224ENST00000606161 U3KPZ7 1027 aaPredicted RBP11.54□□□□□ -0.56
ZEB1-224ENST00000606161 SLC4A2P04920 1241 aa11.52□□□□□ -0.57
ZEB1-224ENST00000606161 SPINK5Q9NQ38 1064 aaPredicted RBP11.34□□□□□ -0.59
ZEB1-224ENST00000606161 SLC4A1APQ9BWU0 796 aaKnown RBP11.25□□□□□ -0.61
ZEB1-224ENST00000606161 CAPN15O75808 1086 aa11.23□□□□□ -0.61
ZEB1-224ENST00000606161 DSG3P32926 999 aa11.2□□□□□ -0.62
ZEB1-224ENST00000606161 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.1□□□□□ -0.63
ZEB1-224ENST00000606161 MYCNP04198 464 aaPredicted RBP11.1□□□□□ -0.63
ZEB1-224ENST00000606161 TRHP20396 242 aaPredicted RBP11.1□□□□□ -0.63
ZEB1-224ENST00000606161 HNRNPUL2Q1KMD3 747 aaKnown RBP11.1□□□□□ -0.63
ZEB1-224ENST00000606161 SAMD1Q6SPF0 538 aaPredicted RBP11.08□□□□□ -0.64
ZEB1-224ENST00000606161 FOXD4L1Q9NU39 408 aa11.07□□□□□ -0.64
ZEB1-224ENST00000606161 ZBTB22O15209 634 aa11.05□□□□□ -0.64
ZEB1-224ENST00000606161 APLP2Q06481 763 aa11.05□□□□□ -0.64
ZEB1-224ENST00000606161 ZNF219Q9P2Y4 722 aaPredicted RBP11.05□□□□□ -0.64
ZEB1-224ENST00000606161 ABCB7O75027 752 aa11.04□□□□□ -0.64
ZEB1-224ENST00000606161 ATF5Q9Y2D1 282 aaPredicted RBP10.95□□□□□ -0.66
ZEB1-224ENST00000606161 POLA2Q14181 598 aa10.83□□□□□ -0.68
ZEB1-224ENST00000606161 ATXN8OSP0DMR3 200 aa10.68□□□□□ -0.7
ZEB1-224ENST00000606161 CSRNP3Q8WYN3 585 aa10.6□□□□□ -0.71
ZEB1-224ENST00000606161 RBM42Q9BTD8 480 aaKnown RBP10.58□□□□□ -0.72
ZEB1-224ENST00000606161 ZBTB12Q9Y330 459 aaPredicted RBP10.54□□□□□ -0.72
ZEB1-224ENST00000606161 OSCARQ8IYS5 282 aa10.52□□□□□ -0.73
ZEB1-224ENST00000606161 POTEHQ6S545 545 aa10.51□□□□□ -0.73
ZEB1-224ENST00000606161 EHMT2Q96KQ7 1210 aa10.49□□□□□ -0.73
ZEB1-224ENST00000606161 MKRN4PQ13434 485 aaPredicted RBP10.43□□□□□ -0.74
ZEB1-224ENST00000606161 AKT1S1Q96B36 256 aa10.4□□□□□ -0.74
ZEB1-224ENST00000606161 CHRDL2Q6WN34 429 aa10.37□□□□□ -0.75
ZEB1-224ENST00000606161 FBLN2P98095 1184 aa10.35□□□□□ -0.75
ZEB1-224ENST00000606161 REM2Q8IYK8 340 aaPredicted RBP10.34□□□□□ -0.75
ZEB1-224ENST00000606161 SPDYE2BA6NHP3 402 aa10.27□□□□□ -0.77
ZEB1-224ENST00000606161 SPDYE6P0CI01 402 aa10.27□□□□□ -0.77
ZEB1-224ENST00000606161 SPDYE2Q495Y8 402 aa10.27□□□□□ -0.77
ZEB1-224ENST00000606161 PITPNM1O00562 1244 aa10.25□□□□□ -0.77
ZEB1-224ENST00000606161 SSUH2Q9Y2M2 353 aa10.21□□□□□ -0.77
ZEB1-224ENST00000606161 PIP4P2Q8N4L2 257 aa10.17□□□□□ -0.78
ZEB1-224ENST00000606161 ZNF692Q9BU19 519 aaPredicted RBP10.17□□□□□ -0.78
ZEB1-224ENST00000606161 FXR2P51116 673 aaKnown RBP eCLIP10.13□□□□□ -0.79
ZEB1-224ENST00000606161 PABPN1Q86U42 306 aaKnown RBP eCLIP10.05□□□□□ -0.8
ZEB1-224ENST00000606161 SPDYE1Q8NFV5 336 aaPredicted RBP10.05□□□□□ -0.8
ZEB1-224ENST00000606161 CLEC11AQ9Y240 323 aa10.04□□□□□ -0.8
ZEB1-224ENST00000606161 PRKAR2AP13861 404 aaKnown RBP9.95□□□□□ -0.82
ZEB1-224ENST00000606161 SPDYE4A6NLX3 237 aa9.91□□□□□ -0.82
ZEB1-224ENST00000606161 EVX2Q03828 476 aa9.91□□□□□ -0.82
ZEB1-224ENST00000606161 CHADLQ6NUI6 762 aa9.91□□□□□ -0.82
ZEB1-224ENST00000606161 SP7Q8TDD2 431 aaPredicted RBP9.9□□□□□ -0.82
ZEB1-224ENST00000606161 HAX1O00165 279 aa9.89□□□□□ -0.83
ZEB1-224ENST00000606161 PRR29P0C7W0 189 aa9.88□□□□□ -0.83
ZEB1-224ENST00000606161 C19orf67A6NJJ6 358 aa9.8□□□□□ -0.84
ZEB1-224ENST00000606161 PROM2Q8N271 834 aa9.76□□□□□ -0.85
ZEB1-224ENST00000606161 CREBZFQ9NS37 354 aa9.74□□□□□ -0.85
ZEB1-224ENST00000606161 FARP1Q9Y4F1 1045 aaPredicted RBP9.73□□□□□ -0.85
ZEB1-224ENST00000606161 STAG3Q9UJ98 1225 aa9.71□□□□□ -0.86
ZEB1-224ENST00000606161 CD44P16070 742 aaKnown RBP9.64□□□□□ -0.87
ZEB1-224ENST00000606161 MNX1P50219 401 aaPredicted RBP9.63□□□□□ -0.87
ZEB1-224ENST00000606161 GABBR2O75899 941 aa9.62□□□□□ -0.87
ZEB1-224ENST00000606161 FKBP8Q14318 412 aa9.56□□□□□ -0.88
ZEB1-224ENST00000606161 ZRANB1Q9UGI0 708 aa9.52□□□□□ -0.89
ZEB1-224ENST00000606161 ZNF579Q8NAF0 562 aaKnown RBP9.51□□□□□ -0.89
ZEB1-224ENST00000606161 POTEIP0CG38 1075 aa9.48□□□□□ -0.89
ZEB1-224ENST00000606161 NPM1P06748 294 aaKnown RBP eCLIP9.45□□□□□ -0.9
ZEB1-224ENST00000606161 PHF12Q96QT6 1004 aa9.45□□□□□ -0.9
ZEB1-224ENST00000606161 GALR2O43603 387 aaPredicted RBP9.43□□□□□ -0.9
ZEB1-224ENST00000606161 MIER1Q8N108 512 aa9.4□□□□□ -0.9
ZEB1-224ENST00000606161 CLCN6P51797 869 aa9.39□□□□□ -0.91
ZEB1-224ENST00000606161 PAK3O75914 559 aaPredicted RBP9.38□□□□□ -0.91
ZEB1-224ENST00000606161 RASEFQ8IZ41 740 aa9.36□□□□□ -0.91
ZEB1-224ENST00000606161 TSPYL2Q9H2G4 693 aaPredicted RBP9.35□□□□□ -0.91
ZEB1-224ENST00000606161 CCDC61Q9Y6R9 512 aa9.35□□□□□ -0.91
ZEB1-224ENST00000606161 PLCD3Q8N3E9 789 aa9.33□□□□□ -0.92
ZEB1-224ENST00000606161 MS4A3Q96HJ5 214 aa9.32□□□□□ -0.92
ZEB1-224ENST00000606161 DCBLD2Q96PD2 775 aa9.31□□□□□ -0.92
ZEB1-224ENST00000606161 PLEKHG5O94827 1062 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms