RNA–Protein interactions for RNA: ENST00000606671.5

ZEB1-225, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-225ENST00000606671 AEBP2Q6ZN18 517 aaPredicted RBP19.9■□□□□ 0.78
ZEB1-225ENST00000606671 CHIC1Q5VXU3 224 aa19.59■□□□□ 0.73
ZEB1-225ENST00000606671 PHF23Q9BUL5 403 aaPredicted RBP17.29■□□□□ 0.36
ZEB1-225ENST00000606671 SENP3Q9H4L4 574 aaPredicted RBP16.78■□□□□ 0.28
ZEB1-225ENST00000606671 PLPPR3Q6T4P5 718 aa15.98■□□□□ 0.15
ZEB1-225ENST00000606671 FOXD1Q16676 465 aa15.59■□□□□ 0.09
ZEB1-225ENST00000606671 PPP6R1Q9UPN7 881 aa15.19■□□□□ 0.02
ZEB1-225ENST00000606671 ADRA2BP18089 450 aa15.17■□□□□ 0.02
ZEB1-225ENST00000606671 PIAS4Q8N2W9 510 aaPredicted RBP14.74□□□□□ -0.05
ZEB1-225ENST00000606671 MSH5O43196 834 aa14.24□□□□□ -0.13
ZEB1-225ENST00000606671 PPP4R3CPQ6ZMV5 832 aa14.13□□□□□ -0.15
ZEB1-225ENST00000606671 KCNA4P22459 653 aa14.06□□□□□ -0.16
ZEB1-225ENST00000606671 SCAF1Q9H7N4 1312 aaKnown RBP13.8□□□□□ -0.2
ZEB1-225ENST00000606671 NCBP3Q53F19 620 aaKnown RBP13.77□□□□□ -0.21
ZEB1-225ENST00000606671 MAPK8IP2Q13387 824 aaPredicted RBP13.72□□□□□ -0.21
ZEB1-225ENST00000606671 CNKSR2Q8WXI2 1034 aa13.66□□□□□ -0.22
ZEB1-225ENST00000606671 NPM3O75607 178 aaKnown RBP13.63□□□□□ -0.23
ZEB1-225ENST00000606671 DMRT2Q9Y5R5 561 aa13.45□□□□□ -0.26
ZEB1-225ENST00000606671 POTEDQ86YR6 584 aa13.42□□□□□ -0.26
ZEB1-225ENST00000606671 SLC4A1APQ9BWU0 796 aaKnown RBP13.4□□□□□ -0.26
ZEB1-225ENST00000606671 RNF216Q9NWF9 866 aaPredicted RBP13.35□□□□□ -0.27
ZEB1-225ENST00000606671 EHMT2Q96KQ7 1210 aa13.29□□□□□ -0.28
ZEB1-225ENST00000606671 HOXD11P31277 338 aaPredicted RBP13.25□□□□□ -0.29
ZEB1-225ENST00000606671 DNAJC5BQ9UF47 199 aa13.17□□□□□ -0.3
ZEB1-225ENST00000606671 CSRNP3Q8WYN3 585 aa13.04□□□□□ -0.32
ZEB1-225ENST00000606671 ZBTB22O15209 634 aa12.98□□□□□ -0.33
ZEB1-225ENST00000606671 DCAF8L1A6NGE4 600 aa12.85□□□□□ -0.35
ZEB1-225ENST00000606671 FOXD4L1Q9NU39 408 aa12.85□□□□□ -0.35
ZEB1-225ENST00000606671 SLC4A2P04920 1241 aa12.84□□□□□ -0.35
ZEB1-225ENST00000606671 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.61□□□□□ -0.39
ZEB1-225ENST00000606671 MYCNP04198 464 aaPredicted RBP12.56□□□□□ -0.4
ZEB1-225ENST00000606671 U3KPZ7 1027 aaPredicted RBP12.47□□□□□ -0.41
ZEB1-225ENST00000606671 ATXN8OSP0DMR3 200 aa12.36□□□□□ -0.43
ZEB1-225ENST00000606671 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.31□□□□□ -0.44
ZEB1-225ENST00000606671 HNRNPUL2Q1KMD3 747 aaKnown RBP12.31□□□□□ -0.44
ZEB1-225ENST00000606671 SAMD1Q6SPF0 538 aaPredicted RBP12.29□□□□□ -0.44
ZEB1-225ENST00000606671 ATF5Q9Y2D1 282 aaPredicted RBP12.27□□□□□ -0.45
ZEB1-225ENST00000606671 RNF39Q9H2S5 420 aa12.26□□□□□ -0.45
ZEB1-225ENST00000606671 APLP2Q06481 763 aa12.11□□□□□ -0.47
ZEB1-225ENST00000606671 C1QBPQ07021 282 aaKnown RBP12.09□□□□□ -0.47
ZEB1-225ENST00000606671 SPINK5Q9NQ38 1064 aaPredicted RBP12.07□□□□□ -0.48
ZEB1-225ENST00000606671 ZNF219Q9P2Y4 722 aaPredicted RBP12.01□□□□□ -0.49
ZEB1-225ENST00000606671 TRHP20396 242 aaPredicted RBP11.98□□□□□ -0.49
ZEB1-225ENST00000606671 CAPN15O75808 1086 aa11.97□□□□□ -0.49
ZEB1-225ENST00000606671 CACNB1Q02641 598 aaPredicted RBP11.83□□□□□ -0.52
ZEB1-225ENST00000606671 POLA2Q14181 598 aa11.83□□□□□ -0.52
ZEB1-225ENST00000606671 ABCB7O75027 752 aa11.79□□□□□ -0.52
ZEB1-225ENST00000606671 FKBP8Q14318 412 aa11.76□□□□□ -0.53
ZEB1-225ENST00000606671 DSG3P32926 999 aa11.74□□□□□ -0.53
ZEB1-225ENST00000606671 MKRN4PQ13434 485 aaPredicted RBP11.74□□□□□ -0.53
ZEB1-225ENST00000606671 FBLN2P98095 1184 aa11.65□□□□□ -0.54
ZEB1-225ENST00000606671 ZBTB12Q9Y330 459 aaPredicted RBP11.6□□□□□ -0.55
ZEB1-225ENST00000606671 SPDYE4A6NLX3 237 aa11.53□□□□□ -0.56
ZEB1-225ENST00000606671 OSCARQ8IYS5 282 aa11.44□□□□□ -0.58
ZEB1-225ENST00000606671 PROM2Q8N271 834 aa11.39□□□□□ -0.59
ZEB1-225ENST00000606671 SPDYE2BA6NHP3 402 aa11.33□□□□□ -0.6
ZEB1-225ENST00000606671 SPDYE6P0CI01 402 aa11.33□□□□□ -0.6
ZEB1-225ENST00000606671 SPDYE2Q495Y8 402 aa11.33□□□□□ -0.6
ZEB1-225ENST00000606671 ZNF692Q9BU19 519 aaPredicted RBP11.33□□□□□ -0.6
ZEB1-225ENST00000606671 SSUH2Q9Y2M2 353 aa11.29□□□□□ -0.6
ZEB1-225ENST00000606671 FBXO3Q9UK99 471 aa11.23□□□□□ -0.61
ZEB1-225ENST00000606671 PABPN1Q86U42 306 aaKnown RBP eCLIP11.2□□□□□ -0.62
ZEB1-225ENST00000606671 RBM42Q9BTD8 480 aaKnown RBP11.13□□□□□ -0.63
ZEB1-225ENST00000606671 VASPP50552 380 aaPredicted RBP11.12□□□□□ -0.63
ZEB1-225ENST00000606671 RTN4Q9NQC3 1192 aaKnown RBP11.09□□□□□ -0.63
ZEB1-225ENST00000606671 AMER1Q5JTC6 1135 aaPredicted RBP11.06□□□□□ -0.64
ZEB1-225ENST00000606671 AKT1S1Q96B36 256 aa11.06□□□□□ -0.64
ZEB1-225ENST00000606671 STAG3Q9UJ98 1225 aa11.02□□□□□ -0.65
ZEB1-225ENST00000606671 IFNLR1Q8IU57 520 aaPredicted RBP11.01□□□□□ -0.65
ZEB1-225ENST00000606671 REM2Q8IYK8 340 aaPredicted RBP10.98□□□□□ -0.65
ZEB1-225ENST00000606671 SPDYE1Q8NFV5 336 aaPredicted RBP10.93□□□□□ -0.66
ZEB1-225ENST00000606671 PLCD3Q8N3E9 789 aa10.91□□□□□ -0.66
ZEB1-225ENST00000606671 CLEC11AQ9Y240 323 aa10.9□□□□□ -0.66
ZEB1-225ENST00000606671 MIER1Q8N108 512 aa10.89□□□□□ -0.67
ZEB1-225ENST00000606671 PITPNM1O00562 1244 aa10.86□□□□□ -0.67
ZEB1-225ENST00000606671 KLHL34Q8N239 644 aa10.85□□□□□ -0.67
ZEB1-225ENST00000606671 PRR29P0C7W0 189 aa10.82□□□□□ -0.68
ZEB1-225ENST00000606671 SPOCK2Q92563 424 aa10.8□□□□□ -0.68
ZEB1-225ENST00000606671 PLEKHG5O94827 1062 aa10.78□□□□□ -0.68
ZEB1-225ENST00000606671 CREBZFQ9NS37 354 aa10.76□□□□□ -0.69
ZEB1-225ENST00000606671 ZBTB47Q9UFB7 747 aaPredicted RBP10.74□□□□□ -0.69
ZEB1-225ENST00000606671 PKD2Q13563 968 aa10.72□□□□□ -0.69
ZEB1-225ENST00000606671 MNX1P50219 401 aaPredicted RBP10.69□□□□□ -0.7
ZEB1-225ENST00000606671 CHADLQ6NUI6 762 aa10.65□□□□□ -0.7
ZEB1-225ENST00000606671 NUBP1P53384 320 aa10.63□□□□□ -0.71
ZEB1-225ENST00000606671 CHRDL2Q6WN34 429 aa10.62□□□□□ -0.71
ZEB1-225ENST00000606671 FXR2P51116 673 aaKnown RBP eCLIP10.6□□□□□ -0.71
ZEB1-225ENST00000606671 CIZ1Q9ULV3 898 aaPredicted RBP10.6□□□□□ -0.71
ZEB1-225ENST00000606671 ECM2O94769 699 aaPredicted RBP10.58□□□□□ -0.72
ZEB1-225ENST00000606671 PRKAR2AP13861 404 aaKnown RBP10.58□□□□□ -0.72
ZEB1-225ENST00000606671 RASEFQ8IZ41 740 aa10.55□□□□□ -0.72
ZEB1-225ENST00000606671 PIP4P2Q8N4L2 257 aa10.55□□□□□ -0.72
ZEB1-225ENST00000606671 NPM1P06748 294 aaKnown RBP eCLIP10.54□□□□□ -0.72
ZEB1-225ENST00000606671 FARP1Q9Y4F1 1045 aaPredicted RBP10.54□□□□□ -0.72
ZEB1-225ENST00000606671 GSE1Q14687 1217 aa10.52□□□□□ -0.73
ZEB1-225ENST00000606671 DCAF8Q5TAQ9 597 aa10.52□□□□□ -0.73
ZEB1-225ENST00000606671 RGL2O15211 777 aa10.51□□□□□ -0.73
ZEB1-225ENST00000606671 DCAF8L2P0C7V8 631 aa10.51□□□□□ -0.73
ZEB1-225ENST00000606671 POTEHQ6S545 545 aa10.51□□□□□ -0.73
ZEB1-225ENST00000606671 FAM212AQ96EL1 285 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 221 ms