RNA–Protein interactions for RNA: ENST00000325180.12

GGA1-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene GGA1, Length 2,528 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-201ENST00000325180 NISCHQ9Y2I1 1504 aa32.26■■■□□ 2.75
GGA1-201ENST00000325180 CCDC180Q9P1Z9 1646 aa28.18■■■□□ 2.1
GGA1-201ENST00000325180 ABCC9O60706 1549 aa27.26■■□□□ 1.95
GGA1-201ENST00000325180 DCAF8L2P0C7V8 631 aa27.04■■□□□ 1.92
GGA1-201ENST00000325180 ZCCHC6Q5VYS8 1495 aaKnown RBP26.99■■□□□ 1.91
GGA1-201ENST00000325180 DCAF1Q9Y4B6 1507 aa26.53■■□□□ 1.84
GGA1-201ENST00000325180 NACADO15069 1562 aa26.37■■□□□ 1.81
GGA1-201ENST00000325180 MYO15BQ96JP2 1530 aa26.33■■□□□ 1.81
GGA1-201ENST00000325180 SHROOM4Q9ULL8 1493 aa26.29■■□□□ 1.8
GGA1-201ENST00000325180 RB1CC1Q8TDY2 1594 aa26.27■■□□□ 1.8
GGA1-201ENST00000325180 SCRIBQ14160 1630 aa26.06■■□□□ 1.76
GGA1-201ENST00000325180 UNC13AQ9UPW8 1703 aa25.81■■□□□ 1.72
GGA1-201ENST00000325180 PABPN1Q86U42 306 aaKnown RBP eCLIP25.72■■□□□ 1.712e-8■■■□□ 14.7
GGA1-201ENST00000325180 BICRAQ9NZM4 1560 aa25.58■■□□□ 1.68
GGA1-201ENST00000325180 CECR2Q9BXF3 1484 aa25.22■■□□□ 1.63
GGA1-201ENST00000325180 SUPT5HO00267 1087 aaKnown RBP25.09■■□□□ 1.61
GGA1-201ENST00000325180 MROH2BQ7Z745 1585 aa24.98■■□□□ 1.59
GGA1-201ENST00000325180 RSF1Q96T23 1441 aaPredicted RBP24.93■■□□□ 1.58
GGA1-201ENST00000325180 BAZ1AQ9NRL2 1556 aaPredicted RBP24.89■■□□□ 1.58
GGA1-201ENST00000325180 SMARCA4P51532 1647 aa24.87■■□□□ 1.57
GGA1-201ENST00000325180 EIF4G1Q04637 1599 aaKnown RBP24.82■■□□□ 1.56
GGA1-201ENST00000325180 WIZO95785 1651 aa24.76■■□□□ 1.55
GGA1-201ENST00000325180 ATAD2BQ9ULI0 1458 aa24.59■■□□□ 1.53
GGA1-201ENST00000325180 CC2D2AQ9P2K1 1620 aa24.58■■□□□ 1.53
GGA1-201ENST00000325180 DNAJC5BQ9UF47 199 aa24.53■■□□□ 1.52
GGA1-201ENST00000325180 PEG3Q9GZU2 1588 aa24.51■■□□□ 1.51
GGA1-201ENST00000325180 SMARCA2P51531 1590 aa24.48■■□□□ 1.51
GGA1-201ENST00000325180 BAZ1BQ9UIG0 1483 aaKnown RBP24.42■■□□□ 1.5
GGA1-201ENST00000325180 NCAPD3P42695 1498 aa24.4■■□□□ 1.5
GGA1-201ENST00000325180 TOP2AP11388 1531 aaKnown RBP24.39■■□□□ 1.49
GGA1-201ENST00000325180 HMGXB3Q12766 1538 aa24.27■■□□□ 1.48
GGA1-201ENST00000325180 CCDC88BA6NC98 1476 aa24.22■■□□□ 1.47
GGA1-201ENST00000325180 NESP48681 1621 aa23.83■■□□□ 1.41
GGA1-201ENST00000325180 CADPSQ9ULU8 1353 aa23.79■■□□□ 1.4
GGA1-201ENST00000325180 CFTRP13569 1480 aa23.77■■□□□ 1.4
GGA1-201ENST00000325180 CHIC1Q5VXU3 224 aa23.73■■□□□ 1.39
GGA1-201ENST00000325180 ABCC8Q09428 1581 aa23.66■■□□□ 1.38
GGA1-201ENST00000325180 LAMC3Q9Y6N6 1575 aa23.59■■□□□ 1.37
GGA1-201ENST00000325180 FANCD2Q9BXW9 1451 aa23.54■■□□□ 1.36
GGA1-201ENST00000325180 PRDM2Q13029 1718 aa23.52■■□□□ 1.36
GGA1-201ENST00000325180 TRIM41Q8WV44 630 aa23.52■■□□□ 1.35
GGA1-201ENST00000325180 PDS5BQ9NTI5 1447 aa23.46■■□□□ 1.35
GGA1-201ENST00000325180 WRNQ14191 1432 aaPredicted RBP eCLIP23.45■■□□□ 1.34
GGA1-201ENST00000325180 KIF21AQ7Z4S6 1674 aa23.45■■□□□ 1.34
GGA1-201ENST00000325180 SYNJ1O43426 1573 aa23.4■■□□□ 1.34
GGA1-201ENST00000325180 CEP164Q9UPV0 1460 aa23.4■■□□□ 1.34
GGA1-201ENST00000325180 CUX1P39880 1505 aa23.36■■□□□ 1.33
GGA1-201ENST00000325180 ERCC6Q03468 1493 aa23.34■■□□□ 1.33
GGA1-201ENST00000325180 URB2Q14146 1524 aaKnown RBP23.29■■□□□ 1.32
GGA1-201ENST00000325180 TOP2BQ02880 1626 aa23.26■■□□□ 1.31
GGA1-201ENST00000325180 TOPBP1Q92547 1522 aa23.24■■□□□ 1.31
GGA1-201ENST00000325180 FAM9AQ8IZU1 332 aaPredicted RBP23.23■■□□□ 1.31
GGA1-201ENST00000325180 BIVM-ERCC5R4GMW8 1640 aa23.21■■□□□ 1.31
GGA1-201ENST00000325180 MRC2Q9UBG0 1479 aa23.19■■□□□ 1.3
GGA1-201ENST00000325180 DNMBPQ6XZF7 1577 aa23.19■■□□□ 1.3
GGA1-201ENST00000325180 FGD5Q6ZNL6 1462 aa23.17■■□□□ 1.3
GGA1-201ENST00000325180 SOGA1O94964 1423 aa23.14■■□□□ 1.29
GGA1-201ENST00000325180 THOC2Q8NI27 1593 aaKnown RBP23.12■■□□□ 1.29
GGA1-201ENST00000325180 RUSC2Q8N2Y8 1516 aa23.11■■□□□ 1.29
GGA1-201ENST00000325180 RAD54L2Q9Y4B4 1467 aa23.11■■□□□ 1.29
GGA1-201ENST00000325180 POLA1P09884 1462 aaPredicted RBP23.11■■□□□ 1.29
GGA1-201ENST00000325180 WDR62O43379 1518 aa23.07■■□□□ 1.28
GGA1-201ENST00000325180 EHMT2Q96KQ7 1210 aa23.03■■□□□ 1.28
GGA1-201ENST00000325180 CUX2O14529 1486 aa22.99■■□□□ 1.27
GGA1-201ENST00000325180 LOC105371045A0A1W2PR82 267 aa22.93■■□□□ 1.26
GGA1-201ENST00000325180 TDRD9Q8NDG6 1382 aaKnown RBP22.93■■□□□ 1.26
GGA1-201ENST00000325180 TARBP1Q13395 1621 aaKnown RBP22.9■■□□□ 1.26
GGA1-201ENST00000325180 ABCA10Q8WWZ4 1543 aa22.89■■□□□ 1.25
GGA1-201ENST00000325180 CSRNP3Q8WYN3 585 aa22.87■■□□□ 1.25
GGA1-201ENST00000325180 KIF27Q86VH2 1401 aa22.87■■□□□ 1.25
GGA1-201ENST00000325180 ZNF608Q9ULD9 1512 aaPredicted RBP22.86■■□□□ 1.25
GGA1-201ENST00000325180 AQRO60306 1485 aaKnown RBP eCLIP22.85■■□□□ 1.254e-7■■■■□ 26.1
GGA1-201ENST00000325180 IFT140Q96RY7 1462 aa22.83■■□□□ 1.25
GGA1-201ENST00000325180 WDR97A6NE52 1622 aa22.83■■□□□ 1.25
GGA1-201ENST00000325180 EEA1Q15075 1411 aa22.78■■□□□ 1.24
GGA1-201ENST00000325180 IGF1RP08069 1367 aa22.77■■□□□ 1.24
GGA1-201ENST00000325180 GAPVD1Q14C86 1478 aa22.75■■□□□ 1.23
GGA1-201ENST00000325180 ABCA5Q8WWZ7 1642 aa22.73■■□□□ 1.23
GGA1-201ENST00000325180 EIF4G3O43432 1585 aaKnown RBP22.68■■□□□ 1.22
GGA1-201ENST00000325180 RAPGEF2Q9Y4G8 1499 aa22.64■■□□□ 1.22
GGA1-201ENST00000325180 CARMIL1Q5VZK9 1371 aa22.63■■□□□ 1.21
GGA1-201ENST00000325180 PRXQ9BXM0 1461 aa22.62■■□□□ 1.21
GGA1-201ENST00000325180 PBRM1Q86U86 1689 aa22.61■■□□□ 1.21
GGA1-201ENST00000325180 UBTFP17480 764 aaKnown RBP22.61■■□□□ 1.21
GGA1-201ENST00000325180 GRIN2BQ13224 1484 aa22.6■■□□□ 1.21
GGA1-201ENST00000325180 ERICH3Q5RHP9 1530 aa22.58■■□□□ 1.2
GGA1-201ENST00000325180 SNAPC4Q5SXM2 1469 aa22.56■■□□□ 1.2
GGA1-201ENST00000325180 KIF21BO75037 1637 aa22.55■■□□□ 1.2
GGA1-201ENST00000325180 GOLGA3Q08378 1498 aa22.54■■□□□ 1.2
GGA1-201ENST00000325180 FBLN2P98095 1184 aa22.53■■□□□ 1.2
GGA1-201ENST00000325180 RANGAP1P46060 587 aaPredicted RBP22.52■■□□□ 1.2
GGA1-201ENST00000325180 CUL7Q14999 1698 aa22.49■■□□□ 1.19
GGA1-201ENST00000325180 ADAMTS12P58397 1594 aa22.47■■□□□ 1.19
GGA1-201ENST00000325180 FHAD1B1AJZ9 1412 aa22.46■■□□□ 1.19
GGA1-201ENST00000325180 CHMP7Q8WUX9 453 aaPredicted RBP22.44■■□□□ 1.18
GGA1-201ENST00000325180 MAGI1Q96QZ7 1491 aaPredicted RBP22.41■■□□□ 1.18
GGA1-201ENST00000325180 TNIKQ9UKE5 1360 aa22.4■■□□□ 1.18
GGA1-201ENST00000325180 SYNJ2O15056 1496 aa22.37■■□□□ 1.17
GGA1-201ENST00000325180 GRIN2AQ12879 1464 aa22.35■■□□□ 1.17
GGA1-201ENST00000325180 CEP162Q5TB80 1403 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms