RNA–Protein interactions for RNA: ENST00000533997.5

ST3GAL3-238, Transcript of ST3 beta-galactoside alpha-2,3-sialyltransferase 3, humanhuman

TSL 1 (best)

Gene ST3GAL3, Length 1,007 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ST3GAL3-238ENST00000533997 NISCHQ9Y2I1 1504 aa22.1■■□□□ 1.13
ST3GAL3-238ENST00000533997 CCDC180Q9P1Z9 1646 aa19.67■□□□□ 0.74
ST3GAL3-238ENST00000533997 ABCC9O60706 1549 aa19.03■□□□□ 0.64
ST3GAL3-238ENST00000533997 DCAF8L2P0C7V8 631 aa18.48■□□□□ 0.55
ST3GAL3-238ENST00000533997 NACADO15069 1562 aa18.46■□□□□ 0.55
ST3GAL3-238ENST00000533997 RB1CC1Q8TDY2 1594 aa18.46■□□□□ 0.55
ST3GAL3-238ENST00000533997 ZCCHC6Q5VYS8 1495 aaKnown RBP18.41■□□□□ 0.54
ST3GAL3-238ENST00000533997 MYO15BQ96JP2 1530 aa18.39■□□□□ 0.54
ST3GAL3-238ENST00000533997 DCAF1Q9Y4B6 1507 aa18.34■□□□□ 0.53
ST3GAL3-238ENST00000533997 UNC13AQ9UPW8 1703 aa17.98■□□□□ 0.47
ST3GAL3-238ENST00000533997 SCRIBQ14160 1630 aa17.87■□□□□ 0.45
ST3GAL3-238ENST00000533997 PABPN1Q86U42 306 aaKnown RBP eCLIP17.79■□□□□ 0.44
ST3GAL3-238ENST00000533997 BICRAQ9NZM4 1560 aa17.77■□□□□ 0.44
ST3GAL3-238ENST00000533997 AEBP2Q6ZN18 517 aaPredicted RBP17.76■□□□□ 0.43
ST3GAL3-238ENST00000533997 SHROOM4Q9ULL8 1493 aa17.75■□□□□ 0.43
ST3GAL3-238ENST00000533997 CHIC1Q5VXU3 224 aa17.51■□□□□ 0.39
ST3GAL3-238ENST00000533997 EIF4G1Q04637 1599 aaKnown RBP17.35■□□□□ 0.37
ST3GAL3-238ENST00000533997 DNAJC5BQ9UF47 199 aa17.27■□□□□ 0.36
ST3GAL3-238ENST00000533997 CC2D2AQ9P2K1 1620 aa17.25■□□□□ 0.35
ST3GAL3-238ENST00000533997 BAZ1AQ9NRL2 1556 aaPredicted RBP17.17■□□□□ 0.34
ST3GAL3-238ENST00000533997 SMARCA4P51532 1647 aa17.13■□□□□ 0.33
ST3GAL3-238ENST00000533997 CECR2Q9BXF3 1484 aa17.12■□□□□ 0.33
ST3GAL3-238ENST00000533997 SMARCA2P51531 1590 aa17.06■□□□□ 0.32
ST3GAL3-238ENST00000533997 NCAPD3P42695 1498 aa16.99■□□□□ 0.31
ST3GAL3-238ENST00000533997 ATAD2BQ9ULI0 1458 aa16.99■□□□□ 0.31
ST3GAL3-238ENST00000533997 MROH2BQ7Z745 1585 aa16.98■□□□□ 0.31
ST3GAL3-238ENST00000533997 PEG3Q9GZU2 1588 aa16.98■□□□□ 0.31
ST3GAL3-238ENST00000533997 HMGXB3Q12766 1538 aa16.93■□□□□ 0.3
ST3GAL3-238ENST00000533997 BAZ1BQ9UIG0 1483 aaKnown RBP16.91■□□□□ 0.3
ST3GAL3-238ENST00000533997 RSF1Q96T23 1441 aaPredicted RBP16.85■□□□□ 0.29
ST3GAL3-238ENST00000533997 WIZO95785 1651 aa16.83■□□□□ 0.28
ST3GAL3-238ENST00000533997 TOP2AP11388 1531 aaKnown RBP16.7■□□□□ 0.26
ST3GAL3-238ENST00000533997 LAMC3Q9Y6N6 1575 aa16.57■□□□□ 0.24
ST3GAL3-238ENST00000533997 SUPT5HO00267 1087 aaKnown RBP16.56■□□□□ 0.24
ST3GAL3-238ENST00000533997 CADPSQ9ULU8 1353 aa16.51■□□□□ 0.23
ST3GAL3-238ENST00000533997 ERCC6Q03468 1493 aa16.48■□□□□ 0.23
ST3GAL3-238ENST00000533997 PDS5BQ9NTI5 1447 aa16.48■□□□□ 0.23
ST3GAL3-238ENST00000533997 CCDC88BA6NC98 1476 aa16.48■□□□□ 0.23
ST3GAL3-238ENST00000533997 NESP48681 1621 aa16.45■□□□□ 0.22
ST3GAL3-238ENST00000533997 CFTRP13569 1480 aa16.42■□□□□ 0.22
ST3GAL3-238ENST00000533997 PRDM2Q13029 1718 aa16.39■□□□□ 0.21
ST3GAL3-238ENST00000533997 KIF21AQ7Z4S6 1674 aa16.34■□□□□ 0.21
ST3GAL3-238ENST00000533997 FANCD2Q9BXW9 1451 aa16.3■□□□□ 0.2
ST3GAL3-238ENST00000533997 CEP164Q9UPV0 1460 aa16.3■□□□□ 0.2
ST3GAL3-238ENST00000533997 CUX2O14529 1486 aa16.26■□□□□ 0.19
ST3GAL3-238ENST00000533997 MRC2Q9UBG0 1479 aa16.23■□□□□ 0.19
ST3GAL3-238ENST00000533997 THOC2Q8NI27 1593 aaKnown RBP16.22■□□□□ 0.19
ST3GAL3-238ENST00000533997 ABCC8Q09428 1581 aa16.18■□□□□ 0.18
ST3GAL3-238ENST00000533997 WDR62O43379 1518 aa16.16■□□□□ 0.18
ST3GAL3-238ENST00000533997 URB2Q14146 1524 aaKnown RBP16.09■□□□□ 0.17
ST3GAL3-238ENST00000533997 DNMBPQ6XZF7 1577 aa16.07■□□□□ 0.16
ST3GAL3-238ENST00000533997 TOPBP1Q92547 1522 aa16.04■□□□□ 0.16
ST3GAL3-238ENST00000533997 IFT140Q96RY7 1462 aa15.97■□□□□ 0.15
ST3GAL3-238ENST00000533997 WRNQ14191 1432 aaPredicted RBP eCLIP15.94■□□□□ 0.149e-6■■■■■ 50.1
ST3GAL3-238ENST00000533997 CUX1P39880 1505 aa15.93■□□□□ 0.14
ST3GAL3-238ENST00000533997 POLA1P09884 1462 aaPredicted RBP15.91■□□□□ 0.14
ST3GAL3-238ENST00000533997 SOGA1O94964 1423 aa15.89■□□□□ 0.13
ST3GAL3-238ENST00000533997 TOP2BQ02880 1626 aa15.89■□□□□ 0.13
ST3GAL3-238ENST00000533997 BIVM-ERCC5R4GMW8 1640 aa15.89■□□□□ 0.13
ST3GAL3-238ENST00000533997 FGD5Q6ZNL6 1462 aa15.89■□□□□ 0.13
ST3GAL3-238ENST00000533997 WDR97A6NE52 1622 aa15.85■□□□□ 0.13
ST3GAL3-238ENST00000533997 TARBP1Q13395 1621 aaKnown RBP15.85■□□□□ 0.13
ST3GAL3-238ENST00000533997 SYNJ1O43426 1573 aa15.83■□□□□ 0.12
ST3GAL3-238ENST00000533997 RAD54L2Q9Y4B4 1467 aa15.81■□□□□ 0.12
ST3GAL3-238ENST00000533997 EIF4G3O43432 1585 aaKnown RBP15.78■□□□□ 0.12
ST3GAL3-238ENST00000533997 ZNF608Q9ULD9 1512 aaPredicted RBP15.78■□□□□ 0.12
ST3GAL3-238ENST00000533997 ABCA10Q8WWZ4 1543 aa15.77■□□□□ 0.11
ST3GAL3-238ENST00000533997 AQRO60306 1485 aaKnown RBP eCLIP15.74■□□□□ 0.113e-6■■■■□ 20.6
ST3GAL3-238ENST00000533997 TDRD9Q8NDG6 1382 aaKnown RBP15.74■□□□□ 0.11
ST3GAL3-238ENST00000533997 TRIM41Q8WV44 630 aa15.71■□□□□ 0.11
ST3GAL3-238ENST00000533997 GAPVD1Q14C86 1478 aa15.71■□□□□ 0.1
ST3GAL3-238ENST00000533997 GRIN2BQ13224 1484 aa15.7■□□□□ 0.1
ST3GAL3-238ENST00000533997 PBRM1Q86U86 1689 aa15.67■□□□□ 0.1
ST3GAL3-238ENST00000533997 ABCA5Q8WWZ7 1642 aa15.67■□□□□ 0.1
ST3GAL3-238ENST00000533997 MAGI1Q96QZ7 1491 aaPredicted RBP15.66■□□□□ 0.1
ST3GAL3-238ENST00000533997 KIF27Q86VH2 1401 aa15.64■□□□□ 0.09
ST3GAL3-238ENST00000533997 OSCARQ8IYS5 282 aa15.64■□□□□ 0.09
ST3GAL3-238ENST00000533997 CHMP7Q8WUX9 453 aaPredicted RBP15.62■□□□□ 0.09
ST3GAL3-238ENST00000533997 ERICH3Q5RHP9 1530 aa15.62■□□□□ 0.09
ST3GAL3-238ENST00000533997 SNAPC4Q5SXM2 1469 aa15.61■□□□□ 0.09
ST3GAL3-238ENST00000533997 FBLN2P98095 1184 aa15.61■□□□□ 0.09
ST3GAL3-238ENST00000533997 DNAJC5Q9H3Z4 198 aa15.59■□□□□ 0.09
ST3GAL3-238ENST00000533997 SYNJ2O15056 1496 aa15.58■□□□□ 0.08
ST3GAL3-238ENST00000533997 CHD1O14646 1710 aa15.57■□□□□ 0.08
ST3GAL3-238ENST00000533997 FHAD1B1AJZ9 1412 aa15.54■□□□□ 0.08
ST3GAL3-238ENST00000533997 CUL7Q14999 1698 aa15.52■□□□□ 0.08
ST3GAL3-238ENST00000533997 ADAMTS12P58397 1594 aa15.51■□□□□ 0.07
ST3GAL3-238ENST00000533997 IGF1RP08069 1367 aa15.49■□□□□ 0.07
ST3GAL3-238ENST00000533997 GRIN2AQ12879 1464 aa15.47■□□□□ 0.07
ST3GAL3-238ENST00000533997 EEA1Q15075 1411 aa15.46■□□□□ 0.07
ST3GAL3-238ENST00000533997 CARMIL1Q5VZK9 1371 aa15.45■□□□□ 0.06
ST3GAL3-238ENST00000533997 RUSC2Q8N2Y8 1516 aa15.38■□□□□ 0.05
ST3GAL3-238ENST00000533997 NUP160Q12769 1436 aa15.38■□□□□ 0.05
ST3GAL3-238ENST00000533997 CSRNP3Q8WYN3 585 aa15.38■□□□□ 0.05
ST3GAL3-238ENST00000533997 RAPGEF2Q9Y4G8 1499 aa15.38■□□□□ 0.05
ST3GAL3-238ENST00000533997 CLASP1Q7Z460 1538 aa15.38■□□□□ 0.05
ST3GAL3-238ENST00000533997 CEP170Q5SW79 1584 aa15.34■□□□□ 0.05
ST3GAL3-238ENST00000533997 PHF23Q9BUL5 403 aaPredicted RBP15.34■□□□□ 0.05
ST3GAL3-238ENST00000533997 KIAA0586Q9BVV6 1533 aa15.31■□□□□ 0.04
ST3GAL3-238ENST00000533997 RIMBP3CA6NJZ7 1639 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms