RNA–Protein interactions for RNA: ENST00000453208.5

GGA1-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 5

Gene GGA1, Length 639 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-215ENST00000453208 NISCHQ9Y2I1 1504 aa46.38■■■■■ 5.02
GGA1-215ENST00000453208 ABCC9O60706 1549 aa42.4■■■■■ 4.38
GGA1-215ENST00000453208 CCDC180Q9P1Z9 1646 aa41.62■■■■■ 4.25
GGA1-215ENST00000453208 DNAJC5BQ9UF47 199 aa40.41■■■■■ 4.06
GGA1-215ENST00000453208 RB1CC1Q8TDY2 1594 aa39.89■■■■□ 3.98
GGA1-215ENST00000453208 NACADO15069 1562 aa39.51■■■■□ 3.92
GGA1-215ENST00000453208 PABPN1Q86U42 306 aaKnown RBP eCLIP39.49■■■■□ 3.918e-11■□□□□ 10.1
GGA1-215ENST00000453208 DCAF8L2P0C7V8 631 aa39.41■■■■□ 3.9
GGA1-215ENST00000453208 UNC13AQ9UPW8 1703 aa39.08■■■■□ 3.85
GGA1-215ENST00000453208 BICRAQ9NZM4 1560 aa38.99■■■■□ 3.83
GGA1-215ENST00000453208 MYO15BQ96JP2 1530 aa38.79■■■■□ 3.8
GGA1-215ENST00000453208 ZCCHC6Q5VYS8 1495 aaKnown RBP38.35■■■■□ 3.73
GGA1-215ENST00000453208 CC2D2AQ9P2K1 1620 aa38.18■■■■□ 3.7
GGA1-215ENST00000453208 CECR2Q9BXF3 1484 aa38.16■■■■□ 3.7
GGA1-215ENST00000453208 DCAF1Q9Y4B6 1507 aa38.16■■■■□ 3.7
GGA1-215ENST00000453208 SCRIBQ14160 1630 aa38.12■■■■□ 3.69
GGA1-215ENST00000453208 SHROOM4Q9ULL8 1493 aa38.09■■■■□ 3.69
GGA1-215ENST00000453208 EIF4G1Q04637 1599 aaKnown RBP37.97■■■■□ 3.67
GGA1-215ENST00000453208 DNAJC5Q9H3Z4 198 aa37.2■■■■□ 3.55
GGA1-215ENST00000453208 NCAPD3P42695 1498 aa36.6■■■■□ 3.45
GGA1-215ENST00000453208 CUX2O14529 1486 aa36.53■■■■□ 3.44
GGA1-215ENST00000453208 ATAD2BQ9ULI0 1458 aa36.48■■■■□ 3.43
GGA1-215ENST00000453208 ERCC6Q03468 1493 aa36.47■■■■□ 3.43
GGA1-215ENST00000453208 NESP48681 1621 aa36.35■■■■□ 3.41
GGA1-215ENST00000453208 SMARCA4P51532 1647 aa36.25■■■■□ 3.39
GGA1-215ENST00000453208 HMGXB3Q12766 1538 aa36.2■■■■□ 3.39
GGA1-215ENST00000453208 SMARCA2P51531 1590 aa36.17■■■■□ 3.38
GGA1-215ENST00000453208 BAZ1BQ9UIG0 1483 aaKnown RBP36.01■■■■□ 3.36
GGA1-215ENST00000453208 THOC2Q8NI27 1593 aaKnown RBP35.93■■■■□ 3.34
GGA1-215ENST00000453208 BAZ1AQ9NRL2 1556 aaPredicted RBP35.93■■■■□ 3.34
GGA1-215ENST00000453208 PEG3Q9GZU2 1588 aa35.86■■■■□ 3.33
GGA1-215ENST00000453208 MROH2BQ7Z745 1585 aa35.85■■■■□ 3.33
GGA1-215ENST00000453208 LAMC3Q9Y6N6 1575 aa35.73■■■■□ 3.31
GGA1-215ENST00000453208 KIF21AQ7Z4S6 1674 aa35.68■■■■□ 3.3
GGA1-215ENST00000453208 PDS5BQ9NTI5 1447 aa35.57■■■■□ 3.28
GGA1-215ENST00000453208 CADPSQ9ULU8 1353 aa35.48■■■■□ 3.27
GGA1-215ENST00000453208 TRIM41Q8WV44 630 aa35.42■■■■□ 3.26
GGA1-215ENST00000453208 MRC2Q9UBG0 1479 aa35.36■■■■□ 3.25
GGA1-215ENST00000453208 WIZO95785 1651 aa35.33■■■■□ 3.25
GGA1-215ENST00000453208 WDR62O43379 1518 aa35.3■■■■□ 3.24
GGA1-215ENST00000453208 CEP164Q9UPV0 1460 aa35.09■■■■□ 3.21
GGA1-215ENST00000453208 FANCD2Q9BXW9 1451 aa35.09■■■■□ 3.21
GGA1-215ENST00000453208 CFTRP13569 1480 aa34.98■■■■□ 3.19
GGA1-215ENST00000453208 URB2Q14146 1524 aaKnown RBP34.91■■■■□ 3.18
GGA1-215ENST00000453208 RSF1Q96T23 1441 aaPredicted RBP34.91■■■■□ 3.18
GGA1-215ENST00000453208 OSCARQ8IYS5 282 aa34.82■■■■□ 3.16
GGA1-215ENST00000453208 TOP2AP11388 1531 aaKnown RBP34.77■■■■□ 3.16
GGA1-215ENST00000453208 ZNF608Q9ULD9 1512 aaPredicted RBP34.61■■■■□ 3.13
GGA1-215ENST00000453208 CCDC88BA6NC98 1476 aa34.49■■■■□ 3.11
GGA1-215ENST00000453208 RIMBP3CA6NJZ7 1639 aa34.48■■■■□ 3.11
GGA1-215ENST00000453208 RIMBP3BA6NNM3 1639 aa34.48■■■■□ 3.11
GGA1-215ENST00000453208 RIMBP3Q9UFD9 1639 aa34.48■■■■□ 3.11
GGA1-215ENST00000453208 IFT140Q96RY7 1462 aa34.41■■■■□ 3.1
GGA1-215ENST00000453208 TOPBP1Q92547 1522 aa34.38■■■■□ 3.09
GGA1-215ENST00000453208 ARHGEF11O15085 1522 aa34.35■■■■□ 3.09
GGA1-215ENST00000453208 PRDM2Q13029 1718 aa34.34■■■■□ 3.09
GGA1-215ENST00000453208 EIF4G3O43432 1585 aaKnown RBP34.23■■■■□ 3.07
GGA1-215ENST00000453208 AQRO60306 1485 aaKnown RBP eCLIP34.2■■■■□ 3.072e-6■■□□□ 13.2
GGA1-215ENST00000453208 CYB5RLQ6IPT4 315 aa34.17■■■■□ 3.06
GGA1-215ENST00000453208 DNMBPQ6XZF7 1577 aa34.13■■■■□ 3.05
GGA1-215ENST00000453208 TARBP1Q13395 1621 aaKnown RBP34.11■■■■□ 3.05
GGA1-215ENST00000453208 ARAP1Q96P48 1450 aa34.06■■■■□ 3.04
GGA1-215ENST00000453208 ABCC8Q09428 1581 aa34.04■■■■□ 3.04
GGA1-215ENST00000453208 CHD1O14646 1710 aa34.03■■■■□ 3.04
GGA1-215ENST00000453208 POLA1P09884 1462 aaPredicted RBP34.02■■■■□ 3.04
GGA1-215ENST00000453208 RAD54L2Q9Y4B4 1467 aa34■■■■□ 3.03
GGA1-215ENST00000453208 FBLN2P98095 1184 aa33.99■■■■□ 3.03
GGA1-215ENST00000453208 TDRD9Q8NDG6 1382 aaKnown RBP33.92■■■■□ 3.02
GGA1-215ENST00000453208 TRHP20396 242 aaPredicted RBP33.85■■■■□ 3.01
GGA1-215ENST00000453208 SOGA1O94964 1423 aa33.81■■■■□ 3
GGA1-215ENST00000453208 SNAPC4Q5SXM2 1469 aa33.78■■■■□ 3
GGA1-215ENST00000453208 FGD5Q6ZNL6 1462 aa33.74■■■□□ 2.99
GGA1-215ENST00000453208 CLASP1Q7Z460 1538 aa33.71■■■□□ 2.99
GGA1-215ENST00000453208 CUX1P39880 1505 aa33.69■■■□□ 2.98
GGA1-215ENST00000453208 CHMP7Q8WUX9 453 aaPredicted RBP33.59■■■□□ 2.97
GGA1-215ENST00000453208 GRIN2BQ13224 1484 aa33.53■■■□□ 2.96
GGA1-215ENST00000453208 MAGI1Q96QZ7 1491 aaPredicted RBP33.53■■■□□ 2.96
GGA1-215ENST00000453208 SYNJ1O43426 1573 aa33.49■■■□□ 2.95
GGA1-215ENST00000453208 SYNJ2O15056 1496 aa33.48■■■□□ 2.95
GGA1-215ENST00000453208 WDR97A6NE52 1622 aa33.47■■■□□ 2.95
GGA1-215ENST00000453208 SUPT5HO00267 1087 aaKnown RBP33.47■■■□□ 2.95
GGA1-215ENST00000453208 GAPVD1Q14C86 1478 aa33.37■■■□□ 2.93
GGA1-215ENST00000453208 ERCC6L2Q5T890 1561 aa33.31■■■□□ 2.92
GGA1-215ENST00000453208 PBRM1Q86U86 1689 aa33.31■■■□□ 2.92
GGA1-215ENST00000453208 ABCA5Q8WWZ7 1642 aa33.27■■■□□ 2.92
GGA1-215ENST00000453208 ABCA10Q8WWZ4 1543 aa33.27■■■□□ 2.92
GGA1-215ENST00000453208 GRIN2AQ12879 1464 aa33.13■■■□□ 2.89
GGA1-215ENST00000453208 CEP170Q5SW79 1584 aa33.11■■■□□ 2.89
GGA1-215ENST00000453208 AEBP2Q6ZN18 517 aaPredicted RBP33.1■■■□□ 2.89
GGA1-215ENST00000453208 NUP160Q12769 1436 aa33.08■■■□□ 2.89
GGA1-215ENST00000453208 ADAMTS12P58397 1594 aa33.06■■■□□ 2.88
GGA1-215ENST00000453208 WRNQ14191 1432 aaPredicted RBP eCLIP33■■■□□ 2.87
GGA1-215ENST00000453208 SHROOM2Q13796 1616 aa32.91■■■□□ 2.86
GGA1-215ENST00000453208 FHAD1B1AJZ9 1412 aa32.91■■■□□ 2.86
GGA1-215ENST00000453208 TOP2BQ02880 1626 aa32.88■■■□□ 2.85
GGA1-215ENST00000453208 BIVM-ERCC5R4GMW8 1640 aa32.86■■■□□ 2.85
GGA1-215ENST00000453208 PRG4Q92954 1404 aaPredicted RBP32.79■■■□□ 2.84
GGA1-215ENST00000453208 ERICH3Q5RHP9 1530 aa32.77■■■□□ 2.84
GGA1-215ENST00000453208 JPH4Q96JJ6 628 aa32.72■■■□□ 2.83
GGA1-215ENST00000453208 KIF13AQ9H1H9 1805 aa32.72■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms