RNA–Protein interactions for RNA: ENST00000558832.5

ZEB1-213, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 570 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-213ENST00000558832 AEBP2Q6ZN18 517 aaPredicted RBP25.61■■□□□ 1.69
ZEB1-213ENST00000558832 CHIC1Q5VXU3 224 aa25.14■■□□□ 1.62
ZEB1-213ENST00000558832 PHF23Q9BUL5 403 aaPredicted RBP22.21■■□□□ 1.15
ZEB1-213ENST00000558832 SENP3Q9H4L4 574 aaPredicted RBP21.56■■□□□ 1.04
ZEB1-213ENST00000558832 PLPPR3Q6T4P5 718 aa20.45■□□□□ 0.86
ZEB1-213ENST00000558832 FOXD1Q16676 465 aa20.07■□□□□ 0.8
ZEB1-213ENST00000558832 PPP6R1Q9UPN7 881 aa19.53■□□□□ 0.72
ZEB1-213ENST00000558832 ADRA2BP18089 450 aa19.49■□□□□ 0.71
ZEB1-213ENST00000558832 PIAS4Q8N2W9 510 aaPredicted RBP18.92■□□□□ 0.62
ZEB1-213ENST00000558832 POTEDQ86YR6 584 aa18.42■□□□□ 0.54
ZEB1-213ENST00000558832 MSH5O43196 834 aa18.32■□□□□ 0.52
ZEB1-213ENST00000558832 PPP4R3CPQ6ZMV5 832 aa18.09■□□□□ 0.49
ZEB1-213ENST00000558832 KCNA4P22459 653 aa17.96■□□□□ 0.47
ZEB1-213ENST00000558832 SCAF1Q9H7N4 1312 aaKnown RBP17.68■□□□□ 0.42
ZEB1-213ENST00000558832 MAPK8IP2Q13387 824 aaPredicted RBP17.64■□□□□ 0.41
ZEB1-213ENST00000558832 NCBP3Q53F19 620 aaKnown RBP17.59■□□□□ 0.41
ZEB1-213ENST00000558832 CNKSR2Q8WXI2 1034 aa17.5■□□□□ 0.39
ZEB1-213ENST00000558832 NPM3O75607 178 aaKnown RBP17.45■□□□□ 0.38
ZEB1-213ENST00000558832 DMRT2Q9Y5R5 561 aa17.29■□□□□ 0.36
ZEB1-213ENST00000558832 RNF216Q9NWF9 866 aaPredicted RBP17.12■□□□□ 0.33
ZEB1-213ENST00000558832 SLC4A1APQ9BWU0 796 aaKnown RBP17.08■□□□□ 0.32
ZEB1-213ENST00000558832 HOXD11P31277 338 aaPredicted RBP17.02■□□□□ 0.32
ZEB1-213ENST00000558832 DNAJC5BQ9UF47 199 aa16.89■□□□□ 0.29
ZEB1-213ENST00000558832 EHMT2Q96KQ7 1210 aa16.86■□□□□ 0.29
ZEB1-213ENST00000558832 CSRNP3Q8WYN3 585 aa16.62■□□□□ 0.25
ZEB1-213ENST00000558832 ZBTB22O15209 634 aa16.58■□□□□ 0.24
ZEB1-213ENST00000558832 DCAF8L1A6NGE4 600 aa16.46■□□□□ 0.23
ZEB1-213ENST00000558832 SLC4A2P04920 1241 aa16.46■□□□□ 0.23
ZEB1-213ENST00000558832 FOXD4L1Q9NU39 408 aa16.41■□□□□ 0.22
ZEB1-213ENST00000558832 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.15■□□□□ 0.18
ZEB1-213ENST00000558832 MYCNP04198 464 aaPredicted RBP16.05■□□□□ 0.16
ZEB1-213ENST00000558832 U3KPZ7 1027 aaPredicted RBP16.01■□□□□ 0.15
ZEB1-213ENST00000558832 ATXN8OSP0DMR3 200 aa15.79■□□□□ 0.12
ZEB1-213ENST00000558832 RNF39Q9H2S5 420 aa15.79■□□□□ 0.12
ZEB1-213ENST00000558832 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.73■□□□□ 0.11
ZEB1-213ENST00000558832 HNRNPUL2Q1KMD3 747 aaKnown RBP15.73■□□□□ 0.11
ZEB1-213ENST00000558832 SAMD1Q6SPF0 538 aaPredicted RBP15.72■□□□□ 0.11
ZEB1-213ENST00000558832 ATF5Q9Y2D1 282 aaPredicted RBP15.72■□□□□ 0.11
ZEB1-213ENST00000558832 C1QBPQ07021 282 aaKnown RBP15.55■□□□□ 0.08
ZEB1-213ENST00000558832 SPINK5Q9NQ38 1064 aaPredicted RBP15.51■□□□□ 0.07
ZEB1-213ENST00000558832 APLP2Q06481 763 aa15.48■□□□□ 0.07
ZEB1-213ENST00000558832 ZNF219Q9P2Y4 722 aaPredicted RBP15.37■□□□□ 0.05
ZEB1-213ENST00000558832 CAPN15O75808 1086 aa15.35■□□□□ 0.05
ZEB1-213ENST00000558832 TRHP20396 242 aaPredicted RBP15.35■□□□□ 0.05
ZEB1-213ENST00000558832 CACNB1Q02641 598 aaPredicted RBP15.34■□□□□ 0.05
ZEB1-213ENST00000558832 POLA2Q14181 598 aa15.16■□□□□ 0.02
ZEB1-213ENST00000558832 ABCB7O75027 752 aa15.13■□□□□ 0.01
ZEB1-213ENST00000558832 DSG3P32926 999 aa15.1■□□□□ 0.01
ZEB1-213ENST00000558832 MKRN4PQ13434 485 aaPredicted RBP15.04■□□□□ -0
ZEB1-213ENST00000558832 FKBP8Q14318 412 aa14.96□□□□□ -0.01
ZEB1-213ENST00000558832 FBLN2P98095 1184 aa14.89□□□□□ -0.03
ZEB1-213ENST00000558832 ZBTB12Q9Y330 459 aaPredicted RBP14.83□□□□□ -0.04
ZEB1-213ENST00000558832 SPDYE4A6NLX3 237 aa14.72□□□□□ -0.05
ZEB1-213ENST00000558832 OSCARQ8IYS5 282 aa14.66□□□□□ -0.06
ZEB1-213ENST00000558832 PROM2Q8N271 834 aa14.57□□□□□ -0.08
ZEB1-213ENST00000558832 SPDYE2BA6NHP3 402 aa14.51□□□□□ -0.09
ZEB1-213ENST00000558832 SPDYE6P0CI01 402 aa14.51□□□□□ -0.09
ZEB1-213ENST00000558832 SPDYE2Q495Y8 402 aa14.51□□□□□ -0.09
ZEB1-213ENST00000558832 ZNF692Q9BU19 519 aaPredicted RBP14.49□□□□□ -0.09
ZEB1-213ENST00000558832 SSUH2Q9Y2M2 353 aa14.48□□□□□ -0.09
ZEB1-213ENST00000558832 PABPN1Q86U42 306 aaKnown RBP eCLIP14.33□□□□□ -0.12
ZEB1-213ENST00000558832 AMER1Q5JTC6 1135 aaPredicted RBP14.3□□□□□ -0.12
ZEB1-213ENST00000558832 RTN4Q9NQC3 1192 aaKnown RBP14.29□□□□□ -0.12
ZEB1-213ENST00000558832 RBM42Q9BTD8 480 aaKnown RBP14.28□□□□□ -0.12
ZEB1-213ENST00000558832 FBXO3Q9UK99 471 aa14.28□□□□□ -0.12
ZEB1-213ENST00000558832 POTEHQ6S545 545 aa14.27□□□□□ -0.13
ZEB1-213ENST00000558832 AKT1S1Q96B36 256 aa14.2□□□□□ -0.14
ZEB1-213ENST00000558832 VASPP50552 380 aaPredicted RBP14.16□□□□□ -0.14
ZEB1-213ENST00000558832 REM2Q8IYK8 340 aaPredicted RBP14.1□□□□□ -0.15
ZEB1-213ENST00000558832 STAG3Q9UJ98 1225 aa14.07□□□□□ -0.16
ZEB1-213ENST00000558832 IFNLR1Q8IU57 520 aaPredicted RBP14.02□□□□□ -0.17
ZEB1-213ENST00000558832 SPDYE1Q8NFV5 336 aaPredicted RBP14.02□□□□□ -0.17
ZEB1-213ENST00000558832 PITPNM1O00562 1244 aa13.95□□□□□ -0.18
ZEB1-213ENST00000558832 CLEC11AQ9Y240 323 aa13.95□□□□□ -0.18
ZEB1-213ENST00000558832 MIER1Q8N108 512 aa13.9□□□□□ -0.18
ZEB1-213ENST00000558832 PLCD3Q8N3E9 789 aa13.89□□□□□ -0.19
ZEB1-213ENST00000558832 PRR29P0C7W0 189 aa13.85□□□□□ -0.19
ZEB1-213ENST00000558832 KLHL34Q8N239 644 aa13.81□□□□□ -0.2
ZEB1-213ENST00000558832 CREBZFQ9NS37 354 aa13.8□□□□□ -0.2
ZEB1-213ENST00000558832 SPOCK2Q92563 424 aa13.75□□□□□ -0.21
ZEB1-213ENST00000558832 MNX1P50219 401 aaPredicted RBP13.72□□□□□ -0.21
ZEB1-213ENST00000558832 PLEKHG5O94827 1062 aa13.71□□□□□ -0.21
ZEB1-213ENST00000558832 ZBTB47Q9UFB7 747 aaPredicted RBP13.67□□□□□ -0.22
ZEB1-213ENST00000558832 CHADLQ6NUI6 762 aa13.66□□□□□ -0.22
ZEB1-213ENST00000558832 CHRDL2Q6WN34 429 aa13.66□□□□□ -0.22
ZEB1-213ENST00000558832 SLC24A1O60721 1099 aa13.65□□□□□ -0.22
ZEB1-213ENST00000558832 FXR2P51116 673 aaKnown RBP eCLIP13.65□□□□□ -0.22
ZEB1-213ENST00000558832 PKD2Q13563 968 aa13.65□□□□□ -0.22
ZEB1-213ENST00000558832 NUBP1P53384 320 aa13.61□□□□□ -0.23
ZEB1-213ENST00000558832 PRKAR2AP13861 404 aaKnown RBP13.57□□□□□ -0.24
ZEB1-213ENST00000558832 PIP4P2Q8N4L2 257 aa13.57□□□□□ -0.24
ZEB1-213ENST00000558832 FARP1Q9Y4F1 1045 aaPredicted RBP13.52□□□□□ -0.25
ZEB1-213ENST00000558832 RASEFQ8IZ41 740 aa13.5□□□□□ -0.25
ZEB1-213ENST00000558832 CIZ1Q9ULV3 898 aaPredicted RBP13.5□□□□□ -0.25
ZEB1-213ENST00000558832 NPM1P06748 294 aaKnown RBP eCLIP13.47□□□□□ -0.25
ZEB1-213ENST00000558832 ECM2O94769 699 aaPredicted RBP13.44□□□□□ -0.26
ZEB1-213ENST00000558832 DCAF8Q5TAQ9 597 aa13.42□□□□□ -0.26
ZEB1-213ENST00000558832 GSE1Q14687 1217 aa13.41□□□□□ -0.26
ZEB1-213ENST00000558832 FAM212AQ96EL1 285 aa13.39□□□□□ -0.27
ZEB1-213ENST00000558832 RGL2O15211 777 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms