RNA–Protein interactions for RNA: ENST00000488672.1

GGA1-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 5

Gene GGA1, Length 547 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-221ENST00000488672 NISCHQ9Y2I1 1504 aa19.59■□□□□ 0.73
GGA1-221ENST00000488672 CCDC180Q9P1Z9 1646 aa17.75■□□□□ 0.43
GGA1-221ENST00000488672 ABCC9O60706 1549 aa17.67■□□□□ 0.42
GGA1-221ENST00000488672 RB1CC1Q8TDY2 1594 aa16.88■□□□□ 0.29
GGA1-221ENST00000488672 NACADO15069 1562 aa16.74■□□□□ 0.27
GGA1-221ENST00000488672 DNAJC5BQ9UF47 199 aa16.6■□□□□ 0.25
GGA1-221ENST00000488672 UNC13AQ9UPW8 1703 aa16.58■□□□□ 0.24
GGA1-221ENST00000488672 MYO15BQ96JP2 1530 aa16.52■□□□□ 0.24
GGA1-221ENST00000488672 DCAF8L2P0C7V8 631 aa16.39■□□□□ 0.21
GGA1-221ENST00000488672 BICRAQ9NZM4 1560 aa16.37■□□□□ 0.21
GGA1-221ENST00000488672 PABPN1Q86U42 306 aaKnown RBP eCLIP16.35■□□□□ 0.21
GGA1-221ENST00000488672 DCAF1Q9Y4B6 1507 aa16.24■□□□□ 0.19
GGA1-221ENST00000488672 ZCCHC6Q5VYS8 1495 aaKnown RBP16.24■□□□□ 0.19
GGA1-221ENST00000488672 SHROOM4Q9ULL8 1493 aa16.22■□□□□ 0.19
GGA1-221ENST00000488672 SCRIBQ14160 1630 aa16.05■□□□□ 0.16
GGA1-221ENST00000488672 CC2D2AQ9P2K1 1620 aa16.03■□□□□ 0.16
GGA1-221ENST00000488672 EIF4G1Q04637 1599 aaKnown RBP15.97■□□□□ 0.15
GGA1-221ENST00000488672 CECR2Q9BXF3 1484 aa15.96■□□□□ 0.14
GGA1-221ENST00000488672 NCAPD3P42695 1498 aa15.41■□□□□ 0.06
GGA1-221ENST00000488672 DNAJC5Q9H3Z4 198 aa15.38■□□□□ 0.05
GGA1-221ENST00000488672 CUX2O14529 1486 aa15.37■□□□□ 0.05
GGA1-221ENST00000488672 HMGXB3Q12766 1538 aa15.35■□□□□ 0.05
GGA1-221ENST00000488672 SMARCA2P51531 1590 aa15.34■□□□□ 0.05
GGA1-221ENST00000488672 SMARCA4P51532 1647 aa15.34■□□□□ 0.05
GGA1-221ENST00000488672 ATAD2BQ9ULI0 1458 aa15.33■□□□□ 0.05
GGA1-221ENST00000488672 ERCC6Q03468 1493 aa15.29■□□□□ 0.04
GGA1-221ENST00000488672 BAZ1AQ9NRL2 1556 aaPredicted RBP15.25■□□□□ 0.03
GGA1-221ENST00000488672 PEG3Q9GZU2 1588 aa15.24■□□□□ 0.03
GGA1-221ENST00000488672 BAZ1BQ9UIG0 1483 aaKnown RBP15.19■□□□□ 0.02
GGA1-221ENST00000488672 NESP48681 1621 aa15.15■□□□□ 0.02
GGA1-221ENST00000488672 LAMC3Q9Y6N6 1575 aa15.14■□□□□ 0.01
GGA1-221ENST00000488672 THOC2Q8NI27 1593 aaKnown RBP15.12■□□□□ 0.01
GGA1-221ENST00000488672 MROH2BQ7Z745 1585 aa15.07■□□□□ 0
GGA1-221ENST00000488672 KIF21AQ7Z4S6 1674 aa15.06■□□□□ 0
GGA1-221ENST00000488672 PDS5BQ9NTI5 1447 aa14.99□□□□□ -0.01
GGA1-221ENST00000488672 WIZO95785 1651 aa14.9□□□□□ -0.02
GGA1-221ENST00000488672 CADPSQ9ULU8 1353 aa14.9□□□□□ -0.02
GGA1-221ENST00000488672 WDR62O43379 1518 aa14.88□□□□□ -0.03
GGA1-221ENST00000488672 MRC2Q9UBG0 1479 aa14.88□□□□□ -0.03
GGA1-221ENST00000488672 CEP164Q9UPV0 1460 aa14.8□□□□□ -0.04
GGA1-221ENST00000488672 PRDM2Q13029 1718 aa14.76□□□□□ -0.05
GGA1-221ENST00000488672 FANCD2Q9BXW9 1451 aa14.76□□□□□ -0.05
GGA1-221ENST00000488672 CFTRP13569 1480 aa14.75□□□□□ -0.05
GGA1-221ENST00000488672 TOP2AP11388 1531 aaKnown RBP14.74□□□□□ -0.05
GGA1-221ENST00000488672 RSF1Q96T23 1441 aaPredicted RBP14.69□□□□□ -0.06
GGA1-221ENST00000488672 URB2Q14146 1524 aaKnown RBP14.64□□□□□ -0.07
GGA1-221ENST00000488672 TRIM41Q8WV44 630 aa14.59□□□□□ -0.07
GGA1-221ENST00000488672 OSCARQ8IYS5 282 aa14.54□□□□□ -0.08
GGA1-221ENST00000488672 IFT140Q96RY7 1462 aa14.5□□□□□ -0.09
GGA1-221ENST00000488672 CCDC88BA6NC98 1476 aa14.5□□□□□ -0.09
GGA1-221ENST00000488672 ABCC8Q09428 1581 aa14.47□□□□□ -0.09
GGA1-221ENST00000488672 TOPBP1Q92547 1522 aa14.47□□□□□ -0.09
GGA1-221ENST00000488672 RIMBP3CA6NJZ7 1639 aa14.46□□□□□ -0.09
GGA1-221ENST00000488672 RIMBP3BA6NNM3 1639 aa14.46□□□□□ -0.09
GGA1-221ENST00000488672 RIMBP3Q9UFD9 1639 aa14.46□□□□□ -0.09
GGA1-221ENST00000488672 EIF4G3O43432 1585 aaKnown RBP14.44□□□□□ -0.1
GGA1-221ENST00000488672 DNMBPQ6XZF7 1577 aa14.44□□□□□ -0.1
GGA1-221ENST00000488672 ZNF608Q9ULD9 1512 aaPredicted RBP14.44□□□□□ -0.1
GGA1-221ENST00000488672 CHD1O14646 1710 aa14.39□□□□□ -0.11
GGA1-221ENST00000488672 TARBP1Q13395 1621 aaKnown RBP14.38□□□□□ -0.11
GGA1-221ENST00000488672 ARHGEF11O15085 1522 aa14.38□□□□□ -0.11
GGA1-221ENST00000488672 POLA1P09884 1462 aaPredicted RBP14.31□□□□□ -0.12
GGA1-221ENST00000488672 WDR97A6NE52 1622 aa14.31□□□□□ -0.12
GGA1-221ENST00000488672 AQRO60306 1485 aaKnown RBP eCLIP14.28□□□□□ -0.12
GGA1-221ENST00000488672 ARAP1Q96P48 1450 aa14.22□□□□□ -0.13
GGA1-221ENST00000488672 FGD5Q6ZNL6 1462 aa14.2□□□□□ -0.14
GGA1-221ENST00000488672 RAD54L2Q9Y4B4 1467 aa14.2□□□□□ -0.14
GGA1-221ENST00000488672 SOGA1O94964 1423 aa14.2□□□□□ -0.14
GGA1-221ENST00000488672 MAGI1Q96QZ7 1491 aaPredicted RBP14.18□□□□□ -0.14
GGA1-221ENST00000488672 CLASP1Q7Z460 1538 aa14.18□□□□□ -0.14
GGA1-221ENST00000488672 SNAPC4Q5SXM2 1469 aa14.18□□□□□ -0.14
GGA1-221ENST00000488672 SYNJ1O43426 1573 aa14.17□□□□□ -0.14
GGA1-221ENST00000488672 CUX1P39880 1505 aa14.17□□□□□ -0.14
GGA1-221ENST00000488672 CYB5RLQ6IPT4 315 aa14.17□□□□□ -0.14
GGA1-221ENST00000488672 PBRM1Q86U86 1689 aa14.16□□□□□ -0.14
GGA1-221ENST00000488672 TDRD9Q8NDG6 1382 aaKnown RBP14.15□□□□□ -0.14
GGA1-221ENST00000488672 GRIN2BQ13224 1484 aa14.14□□□□□ -0.15
GGA1-221ENST00000488672 FBLN2P98095 1184 aa14.14□□□□□ -0.15
GGA1-221ENST00000488672 SYNJ2O15056 1496 aa14.11□□□□□ -0.15
GGA1-221ENST00000488672 ABCA5Q8WWZ7 1642 aa14.09□□□□□ -0.15
GGA1-221ENST00000488672 CHMP7Q8WUX9 453 aaPredicted RBP14.07□□□□□ -0.16
GGA1-221ENST00000488672 ABCA10Q8WWZ4 1543 aa14.06□□□□□ -0.16
GGA1-221ENST00000488672 GAPVD1Q14C86 1478 aa14.06□□□□□ -0.16
GGA1-221ENST00000488672 TRHP20396 242 aaPredicted RBP14.04□□□□□ -0.16
GGA1-221ENST00000488672 BIVM-ERCC5R4GMW8 1640 aa14□□□□□ -0.17
GGA1-221ENST00000488672 ADAMTS12P58397 1594 aa13.98□□□□□ -0.17
GGA1-221ENST00000488672 GRIN2AQ12879 1464 aa13.96□□□□□ -0.17
GGA1-221ENST00000488672 TOP2BQ02880 1626 aa13.96□□□□□ -0.17
GGA1-221ENST00000488672 WRNQ14191 1432 aaPredicted RBP eCLIP13.95□□□□□ -0.18
GGA1-221ENST00000488672 SHROOM2Q13796 1616 aa13.93□□□□□ -0.18
GGA1-221ENST00000488672 CEP170Q5SW79 1584 aa13.92□□□□□ -0.18
GGA1-221ENST00000488672 NUP160Q12769 1436 aa13.92□□□□□ -0.18
GGA1-221ENST00000488672 ERICH3Q5RHP9 1530 aa13.9□□□□□ -0.18
GGA1-221ENST00000488672 ERCC6L2Q5T890 1561 aa13.89□□□□□ -0.19
GGA1-221ENST00000488672 FHAD1B1AJZ9 1412 aa13.89□□□□□ -0.19
GGA1-221ENST00000488672 SUPT5HO00267 1087 aaKnown RBP13.84□□□□□ -0.19
GGA1-221ENST00000488672 KIF13AQ9H1H9 1805 aa13.83□□□□□ -0.2
GGA1-221ENST00000488672 RUSC2Q8N2Y8 1516 aa13.79□□□□□ -0.2
GGA1-221ENST00000488672 PRG4Q92954 1404 aaPredicted RBP13.74□□□□□ -0.21
GGA1-221ENST00000488672 AEBP2Q6ZN18 517 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 155.2 ms