RNA–Protein interactions for RNA: ENST00000447515.5

GGA1-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 4

Gene GGA1, Length 577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-213ENST00000447515 NISCHQ9Y2I1 1504 aa37.87■■■■□ 3.65
GGA1-213ENST00000447515 ABCC9O60706 1549 aa34.9■■■■□ 3.18
GGA1-213ENST00000447515 CCDC180Q9P1Z9 1646 aa34.21■■■■□ 3.07
GGA1-213ENST00000447515 DNAJC5BQ9UF47 199 aa33.35■■■□□ 2.93
GGA1-213ENST00000447515 RB1CC1Q8TDY2 1594 aa32.86■■■□□ 2.85
GGA1-213ENST00000447515 NACADO15069 1562 aa32.46■■■□□ 2.79
GGA1-213ENST00000447515 PABPN1Q86U42 306 aaKnown RBP eCLIP32.43■■■□□ 2.78
GGA1-213ENST00000447515 DCAF8L2P0C7V8 631 aa32.31■■■□□ 2.76
GGA1-213ENST00000447515 UNC13AQ9UPW8 1703 aa32.26■■■□□ 2.75
GGA1-213ENST00000447515 BICRAQ9NZM4 1560 aa32.02■■■□□ 2.72
GGA1-213ENST00000447515 MYO15BQ96JP2 1530 aa31.76■■■□□ 2.68
GGA1-213ENST00000447515 CC2D2AQ9P2K1 1620 aa31.48■■■□□ 2.63
GGA1-213ENST00000447515 CECR2Q9BXF3 1484 aa31.46■■■□□ 2.63
GGA1-213ENST00000447515 SHROOM4Q9ULL8 1493 aa31.32■■■□□ 2.6
GGA1-213ENST00000447515 ZCCHC6Q5VYS8 1495 aaKnown RBP31.24■■■□□ 2.59
GGA1-213ENST00000447515 SCRIBQ14160 1630 aa31.24■■■□□ 2.59
GGA1-213ENST00000447515 EIF4G1Q04637 1599 aaKnown RBP31.23■■■□□ 2.59
GGA1-213ENST00000447515 DCAF1Q9Y4B6 1507 aa31.16■■■□□ 2.58
GGA1-213ENST00000447515 DNAJC5Q9H3Z4 198 aa30.95■■■□□ 2.55
GGA1-213ENST00000447515 CUX2O14529 1486 aa30.2■■■□□ 2.43
GGA1-213ENST00000447515 ERCC6Q03468 1493 aa30.11■■■□□ 2.41
GGA1-213ENST00000447515 NCAPD3P42695 1498 aa29.99■■■□□ 2.39
GGA1-213ENST00000447515 ATAD2BQ9ULI0 1458 aa29.86■■■□□ 2.37
GGA1-213ENST00000447515 NESP48681 1621 aa29.85■■■□□ 2.37
GGA1-213ENST00000447515 HMGXB3Q12766 1538 aa29.71■■■□□ 2.35
GGA1-213ENST00000447515 SMARCA4P51532 1647 aa29.69■■■□□ 2.34
GGA1-213ENST00000447515 SMARCA2P51531 1590 aa29.69■■■□□ 2.34
GGA1-213ENST00000447515 THOC2Q8NI27 1593 aaKnown RBP29.6■■■□□ 2.33
GGA1-213ENST00000447515 BAZ1BQ9UIG0 1483 aaKnown RBP29.52■■■□□ 2.32
GGA1-213ENST00000447515 KIF21AQ7Z4S6 1674 aa29.43■■■□□ 2.3
GGA1-213ENST00000447515 TRIM41Q8WV44 630 aa29.41■■■□□ 2.3
GGA1-213ENST00000447515 LAMC3Q9Y6N6 1575 aa29.41■■■□□ 2.3
GGA1-213ENST00000447515 BAZ1AQ9NRL2 1556 aaPredicted RBP29.4■■■□□ 2.3
GGA1-213ENST00000447515 PEG3Q9GZU2 1588 aa29.35■■■□□ 2.29
GGA1-213ENST00000447515 PDS5BQ9NTI5 1447 aa29.25■■■□□ 2.27
GGA1-213ENST00000447515 MROH2BQ7Z745 1585 aa29.23■■■□□ 2.27
GGA1-213ENST00000447515 MRC2Q9UBG0 1479 aa29.07■■■□□ 2.24
GGA1-213ENST00000447515 CADPSQ9ULU8 1353 aa29.07■■■□□ 2.24
GGA1-213ENST00000447515 WDR62O43379 1518 aa29.01■■■□□ 2.23
GGA1-213ENST00000447515 WIZO95785 1651 aa28.88■■■□□ 2.21
GGA1-213ENST00000447515 CEP164Q9UPV0 1460 aa28.82■■■□□ 2.2
GGA1-213ENST00000447515 OSCARQ8IYS5 282 aa28.77■■■□□ 2.2
GGA1-213ENST00000447515 FANCD2Q9BXW9 1451 aa28.76■■■□□ 2.19
GGA1-213ENST00000447515 CFTRP13569 1480 aa28.61■■■□□ 2.17
GGA1-213ENST00000447515 URB2Q14146 1524 aaKnown RBP28.61■■■□□ 2.17
GGA1-213ENST00000447515 RIMBP3CA6NJZ7 1639 aa28.54■■■□□ 2.16
GGA1-213ENST00000447515 RIMBP3BA6NNM3 1639 aa28.54■■■□□ 2.16
GGA1-213ENST00000447515 RIMBP3Q9UFD9 1639 aa28.54■■■□□ 2.16
GGA1-213ENST00000447515 TOP2AP11388 1531 aaKnown RBP28.38■■■□□ 2.13
GGA1-213ENST00000447515 ZNF608Q9ULD9 1512 aaPredicted RBP28.38■■■□□ 2.13
GGA1-213ENST00000447515 RSF1Q96T23 1441 aaPredicted RBP28.37■■■□□ 2.13
GGA1-213ENST00000447515 ARHGEF11O15085 1522 aa28.34■■■□□ 2.13
GGA1-213ENST00000447515 PRDM2Q13029 1718 aa28.31■■■□□ 2.12
GGA1-213ENST00000447515 IFT140Q96RY7 1462 aa28.26■■■□□ 2.11
GGA1-213ENST00000447515 CYB5RLQ6IPT4 315 aa28.2■■■□□ 2.1
GGA1-213ENST00000447515 TOPBP1Q92547 1522 aa28.16■■■□□ 2.1
GGA1-213ENST00000447515 EIF4G3O43432 1585 aaKnown RBP28.15■■■□□ 2.1
GGA1-213ENST00000447515 CCDC88BA6NC98 1476 aa28.11■■■□□ 2.09
GGA1-213ENST00000447515 CHD1O14646 1710 aa28.11■■■□□ 2.09
GGA1-213ENST00000447515 TRHP20396 242 aaPredicted RBP28.07■■■□□ 2.08
GGA1-213ENST00000447515 ARAP1Q96P48 1450 aa28.05■■■□□ 2.08
GGA1-213ENST00000447515 AQRO60306 1485 aaKnown RBP eCLIP28.03■■■□□ 2.08
GGA1-213ENST00000447515 DNMBPQ6XZF7 1577 aa27.99■■■□□ 2.07
GGA1-213ENST00000447515 TARBP1Q13395 1621 aaKnown RBP27.98■■■□□ 2.07
GGA1-213ENST00000447515 FBLN2P98095 1184 aa27.96■■■□□ 2.07
GGA1-213ENST00000447515 ABCC8Q09428 1581 aa27.95■■■□□ 2.07
GGA1-213ENST00000447515 POLA1P09884 1462 aaPredicted RBP27.83■■■□□ 2.05
GGA1-213ENST00000447515 RAD54L2Q9Y4B4 1467 aa27.8■■■□□ 2.04
GGA1-213ENST00000447515 TDRD9Q8NDG6 1382 aaKnown RBP27.76■■■□□ 2.03
GGA1-213ENST00000447515 CLASP1Q7Z460 1538 aa27.71■■■□□ 2.03
GGA1-213ENST00000447515 SNAPC4Q5SXM2 1469 aa27.7■■■□□ 2.02
GGA1-213ENST00000447515 SOGA1O94964 1423 aa27.68■■■□□ 2.02
GGA1-213ENST00000447515 AEBP2Q6ZN18 517 aaPredicted RBP27.65■■■□□ 2.02
GGA1-213ENST00000447515 CHMP7Q8WUX9 453 aaPredicted RBP27.6■■■□□ 2.01
GGA1-213ENST00000447515 SYNJ1O43426 1573 aa27.59■■■□□ 2.01
GGA1-213ENST00000447515 FGD5Q6ZNL6 1462 aa27.58■■■□□ 2.01
GGA1-213ENST00000447515 MAGI1Q96QZ7 1491 aaPredicted RBP27.53■■■□□ 2
GGA1-213ENST00000447515 WDR97A6NE52 1622 aa27.52■■■□□ 2
GGA1-213ENST00000447515 CUX1P39880 1505 aa27.49■■□□□ 1.99
GGA1-213ENST00000447515 GRIN2BQ13224 1484 aa27.49■■□□□ 1.99
GGA1-213ENST00000447515 SYNJ2O15056 1496 aa27.47■■□□□ 1.99
GGA1-213ENST00000447515 GAPVD1Q14C86 1478 aa27.44■■□□□ 1.98
GGA1-213ENST00000447515 PBRM1Q86U86 1689 aa27.41■■□□□ 1.98
GGA1-213ENST00000447515 ERCC6L2Q5T890 1561 aa27.33■■□□□ 1.97
GGA1-213ENST00000447515 ABCA5Q8WWZ7 1642 aa27.24■■□□□ 1.95
GGA1-213ENST00000447515 ABCA10Q8WWZ4 1543 aa27.2■■□□□ 1.94
GGA1-213ENST00000447515 CEP170Q5SW79 1584 aa27.15■■□□□ 1.94
GGA1-213ENST00000447515 GRIN2AQ12879 1464 aa27.15■■□□□ 1.94
GGA1-213ENST00000447515 KIF13AQ9H1H9 1805 aa27.1■■□□□ 1.93
GGA1-213ENST00000447515 ADAMTS12P58397 1594 aa27.08■■□□□ 1.93
GGA1-213ENST00000447515 NUP160Q12769 1436 aa27.07■■□□□ 1.92
GGA1-213ENST00000447515 SHROOM2Q13796 1616 aa27.05■■□□□ 1.92
GGA1-213ENST00000447515 WRNQ14191 1432 aaPredicted RBP eCLIP26.95■■□□□ 1.9
GGA1-213ENST00000447515 FHAD1B1AJZ9 1412 aa26.94■■□□□ 1.9
GGA1-213ENST00000447515 PRG4Q92954 1404 aaPredicted RBP26.9■■□□□ 1.9
GGA1-213ENST00000447515 BIVM-ERCC5R4GMW8 1640 aa26.86■■□□□ 1.89
GGA1-213ENST00000447515 TOP2BQ02880 1626 aa26.84■■□□□ 1.89
GGA1-213ENST00000447515 FAM69CQ0P6D2 419 aa26.83■■□□□ 1.89
GGA1-213ENST00000447515 ERICH3Q5RHP9 1530 aa26.82■■□□□ 1.88
GGA1-213ENST00000447515 JPH4Q96JJ6 628 aa26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms