Protein–RNA interactions for Protein: P53999

SUB1, Activated RNA polymerase II transcriptional coactivator p15, humanhuman

Known RBP eCLIP

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P53999 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.547e-7■■■■□ 21.6
SUB1P53999 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.2□□□□□ -1.747e-7■■■■□ 21.6
SUB1P53999 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.445e-7■■■■□ 21.6
SUB1P53999 RHOBTB3-214ENST00000513091 591 ntTSL 39.14□□□□□ -0.955e-7■■■■□ 21.6
SUB1P53999 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC9.99□□□□□ -0.811e-14■■■■□ 21.6
SUB1P53999 ARCN1-205ENST00000614498 2238 ntTSL 1 (best) BASIC7.88□□□□□ -1.151e-14■■■■□ 21.6
SUB1P53999 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.481e-14■■■■□ 21.6
SUB1P53999 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.09□□□□□ -1.61e-14■■■■□ 21.6
SUB1P53999 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.73□□□□□ -1.971e-6■■■■□ 21.6
SUB1P53999 PSMA4-219ENST00000560217 944 ntTSL 5 BASIC8.83□□□□□ -11e-6■■■■□ 21.6
SUB1P53999 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.66□□□□□ -2.141e-6■■■■□ 21.6
SUB1P53999 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC14.5□□□□□ -0.093e-12■■■■□ 21.6
SUB1P53999 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC13.72□□□□□ -0.213e-12■■■■□ 21.6
SUB1P53999 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.713e-12■■■■□ 21.6
SUB1P53999 BNIP3L-203ENST00000520077 922 ntTSL 1 (best)8.34□□□□□ -1.073e-12■■■■□ 21.6
SUB1P53999 BNIP3L-207ENST00000523949 875 ntTSL 36.54□□□□□ -1.363e-12■■■■□ 21.6
SUB1P53999 BNIP3L-205ENST00000521254 502 ntTSL 25.06□□□□□ -1.63e-12■■■■□ 21.6
SUB1P53999 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC3.76□□□□□ -1.813e-12■■■■□ 21.6
SUB1P53999 EMC4-212ENST00000561246 2019 ntTSL 26.87□□□□□ -1.315e-7■■■■□ 21.5
SUB1P53999 EMC4-211ENST00000560947 709 ntTSL 34.5□□□□□ -1.695e-7■■■■□ 21.5
SUB1P53999 COPG2-202ENST00000425248 3134 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -11e-6■■■■□ 21.5
SUB1P53999 NDUFB5-206ENST00000473500 689 ntTSL 32.59□□□□□ -1.995e-7■■■■□ 21.4
SUB1P53999 CAPRIN1-201ENST00000341394 4108 ntAPPRIS P4 TSL 1 (best) BASIC8.69□□□□□ -1.022e-6■■■■□ 21.4
SUB1P53999 CAPRIN1-215ENST00000533657 2774 ntTSL 28.05□□□□□ -1.122e-6■■■■□ 21.4
SUB1P53999 EIF4A2-222ENST00000492144 993 ntTSL 23.84□□□□□ -1.796e-7■■■■□ 21.4
SUB1P53999 EIF4A2-216ENST00000468362 1356 ntTSL 23.39□□□□□ -1.876e-7■■■■□ 21.4
SUB1P53999 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.06■□□□□ 0.325e-7■■■■□ 21.4
SUB1P53999 C22orf34-202ENST00000400023 1469 ntTSL 1 (best)12.14□□□□□ -0.475e-7■■■■□ 21.4
SUB1P53999 TPT1-207ENST00000490277 1851 ntTSL 26.65□□□□□ -1.346e-42■■■■□ 21.4
SUB1P53999 TPT1-204ENST00000379060 764 ntTSL 5 BASIC4.88□□□□□ -1.636e-42■■■■□ 21.4
SUB1P53999 TPT1-211ENST00000530245 530 ntTSL 34.17□□□□□ -1.746e-42■■■■□ 21.4
SUB1P53999 TPT1-213ENST00000533567 594 ntTSL 33.11□□□□□ -1.916e-42■■■■□ 21.4
SUB1P53999 CAD-203ENST00000428460 953 ntTSL 59.99□□□□□ -0.813e-8■■■■□ 21.4
SUB1P53999 NCAPD2-203ENST00000535804 537 ntTSL 39.87□□□□□ -0.833e-8■■■■□ 21.4
SUB1P53999 SLC2A3-208ENST00000541671 590 ntTSL 28.78□□□□□ -13e-8■■■■□ 21.4
SUB1P53999 CTH-203ENST00000411986 2044 ntTSL 2 BASIC8.07□□□□□ -1.123e-8■■■■□ 21.4
SUB1P53999 SLC2A3-207ENST00000495813 1784 ntTSL 27.39□□□□□ -1.233e-8■■■■□ 21.4
SUB1P53999 CTH-202ENST00000370938 1805 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.373e-8■■■■□ 21.4
SUB1P53999 SEPT7-217ENST00000635175 1464 ntTSL 24.49□□□□□ -1.693e-8■■■■□ 21.4
SUB1P53999 SLC2A3-203ENST00000476634 763 ntTSL 24.31□□□□□ -1.723e-8■■■■□ 21.4
SUB1P53999 SLC2A3-210ENST00000544291 577 ntTSL 54.19□□□□□ -1.743e-8■■■■□ 21.4
SUB1P53999 SLC2A3-211ENST00000544936 589 ntTSL 43.42□□□□□ -1.863e-8■■■■□ 21.4
SUB1P53999 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.395e-7■■■■□ 21.3
SUB1P53999 PRPF8-201ENST00000304992 7295 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.945e-7■■■■□ 21.3
SUB1P53999 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC18.98■□□□□ 0.632e-6■■■■□ 21.3
SUB1P53999 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC15.1■□□□□ 0.012e-6■■■■□ 21.3
SUB1P53999 SHISA5-204ENST00000417962 2306 ntTSL 215.04■□□□□ -02e-6■■■■□ 21.3
SUB1P53999 SHISA5-212ENST00000465449 1739 ntTSL 213.67□□□□□ -0.222e-6■■■■□ 21.3
SUB1P53999 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC13.2□□□□□ -0.32e-6■■■■□ 21.3
SUB1P53999 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13.1□□□□□ -0.312e-6■■■■□ 21.3
SUB1P53999 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC12.71□□□□□ -0.372e-6■■■■□ 21.3
SUB1P53999 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC12.66□□□□□ -0.382e-6■■■■□ 21.3
SUB1P53999 SHISA5-216ENST00000494854 1908 ntTSL 1 (best)12.49□□□□□ -0.412e-6■■■■□ 21.3
SUB1P53999 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.662e-6■■■■□ 21.3
SUB1P53999 SHISA5-218ENST00000497863 972 ntTSL 210.86□□□□□ -0.672e-6■■■■□ 21.3
SUB1P53999 SHISA5-211ENST00000460758 1297 ntTSL 1 (best)9.83□□□□□ -0.842e-6■■■■□ 21.3
SUB1P53999 SHISA5-213ENST00000466424 673 ntTSL 29.02□□□□□ -0.972e-6■■■■□ 21.3
SUB1P53999 ACLY-204ENST00000537919 2974 ntTSL 2 BASIC9.66□□□□□ -0.862e-6■■■■□ 21.3
SUB1P53999 AURKB-203ENST00000577833 867 ntTSL 37.81□□□□□ -1.169e-7■■■■□ 21.3
SUB1P53999 SSR3-201ENST00000265044 3716 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.183e-7■■■■□ 21.3
SUB1P53999 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.059e-13■■■■□ 21.3
SUB1P53999 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.244e-7■■■■□ 21.3
SUB1P53999 NADK-203ENST00000342348 1722 ntAPPRIS ALT2 TSL 213.32□□□□□ -0.289e-13■■■■□ 21.3
SUB1P53999 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC12.72□□□□□ -0.374e-7■■■■□ 21.3
SUB1P53999 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC12.66□□□□□ -0.384e-7■■■■□ 21.3
SUB1P53999 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.649e-13■■■■□ 21.3
SUB1P53999 GTPBP8-206ENST00000485330 1635 ntTSL 29.7□□□□□ -0.864e-7■■■■□ 21.3
SUB1P53999 NADK-204ENST00000378625 3653 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.899e-13■■■■□ 21.3
SUB1P53999 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.321e-6■■■■□ 21.3
SUB1P53999 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.87□□□□□ -0.351e-6■■■■□ 21.3
SUB1P53999 EIF2A-203ENST00000460851 2198 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.094e-7■■■■□ 21.3
SUB1P53999 EIF2A-206ENST00000465535 1273 ntTSL 53.27□□□□□ -1.894e-7■■■■□ 21.3
SUB1P53999 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.05□□□□□ -1.924e-7■■■■□ 21.3
SUB1P53999 EIF2A-211ENST00000477551 1906 ntTSL 1 (best)1.89□□□□□ -2.114e-7■■■■□ 21.3
SUB1P53999 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.622e-6■■■■□ 21.3
SUB1P53999 NUB1-212ENST00000568733 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.762e-6■■■■□ 21.3
SUB1P53999 MCM3-201ENST00000229854 3083 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.091e-10■■■■□ 21.3
SUB1P53999 MCM3-207ENST00000616552 3208 ntTSL 1 (best) BASIC7.44□□□□□ -1.221e-10■■■■□ 21.3
SUB1P53999 MCM3-205ENST00000596288 3169 ntTSL 1 (best) BASIC7.06□□□□□ -1.281e-10■■■■□ 21.3
SUB1P53999 GART-201ENST00000361093 2149 ntTSL 1 (best) BASIC6.64□□□□□ -1.353e-6■■■■□ 21.2
SUB1P53999 GART-213ENST00000467575 922 ntTSL 34.65□□□□□ -1.673e-6■■■■□ 21.2
SUB1P53999 GART-211ENST00000460305 389 ntTSL 1 (best)2.34□□□□□ -2.033e-6■■■■□ 21.2
SUB1P53999 CS-215ENST00000549143 2811 ntTSL 26.72□□□□□ -1.335e-7■■■■□ 21.2
SUB1P53999 CS-212ENST00000548567 3057 ntTSL 1 (best) BASIC5.56□□□□□ -1.525e-7■■■■□ 21.2
SUB1P53999 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.575e-7■■■■□ 21.2
SUB1P53999 CS-213ENST00000548746 551 ntTSL 54.49□□□□□ -1.695e-7■■■■□ 21.2
SUB1P53999 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 03e-8■■■■□ 21.2
SUB1P53999 GRN-205ENST00000586443 1557 ntTSL 315.04■□□□□ -03e-8■■■■□ 21.2
SUB1P53999 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.263e-8■■■■□ 21.2
SUB1P53999 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.319e-12■■■■□ 21.2
SUB1P53999 GRN-214ENST00000589265 1632 ntTSL 5 BASIC12.37□□□□□ -0.433e-8■■■■□ 21.2
SUB1P53999 GRN-204ENST00000586242 665 ntTSL 312.28□□□□□ -0.443e-8■■■■□ 21.2
SUB1P53999 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.463e-8■■■■□ 21.2
SUB1P53999 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.59e-12■■■■□ 21.2
SUB1P53999 APOLD1-203ENST00000534843 2375 ntTSL 211.89□□□□□ -0.513e-8■■■■□ 21.2
SUB1P53999 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.513e-8■■■■□ 21.2
SUB1P53999 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.533e-8■■■■□ 21.2
SUB1P53999 CAD-205ENST00000458503 806 ntTSL 511.68□□□□□ -0.543e-8■■■■□ 21.2
SUB1P53999 LAS1L-205ENST00000484069 5205 ntTSL 211.59□□□□□ -0.553e-8■■■■□ 21.2
SUB1P53999 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.583e-8■■■■□ 21.2
Retrieved 100 of 11,644 protein–RNA pairs in 136.6 ms