RNA–Protein interactions for RNA: ENST00000453664.5

USP19-208, Transcript of ubiquitin specific peptidase 19, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene USP19, Length 4,719 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP19-208ENST00000453664 NISCHQ9Y2I1 1504 aa24.86■■□□□ 1.57
USP19-208ENST00000453664 DCAF8L2P0C7V8 631 aa23.55■■□□□ 1.36
USP19-208ENST00000453664 SUPT5HO00267 1087 aaKnown RBP22.57■■□□□ 1.2
USP19-208ENST00000453664 SHROOM4Q9ULL8 1493 aa22.53■■□□□ 1.2
USP19-208ENST00000453664 PELP1Q8IZL8 1130 aaKnown RBP22.11■■□□□ 1.13
USP19-208ENST00000453664 MYT1Q01538 1121 aa21.8■■□□□ 1.08
USP19-208ENST00000453664 PCGF6Q9BYE7 350 aa21.62■■□□□ 1.05
USP19-208ENST00000453664 CENPBP07199 599 aaPredicted RBP21.33■■□□□ 1
USP19-208ENST00000453664 EHMT2Q96KQ7 1210 aa21.23■□□□□ 0.99
USP19-208ENST00000453664 HRCP23327 699 aa21.22■□□□□ 0.99
USP19-208ENST00000453664 ZEB1P37275 1124 aaPredicted RBP21.18■□□□□ 0.98
USP19-208ENST00000453664 FAM9AQ8IZU1 332 aaPredicted RBP21.09■□□□□ 0.97
USP19-208ENST00000453664 TRIM41Q8WV44 630 aa21.07■□□□□ 0.96
USP19-208ENST00000453664 ERICH6Q7L0X2 663 aa21.05■□□□□ 0.96
USP19-208ENST00000453664 CHIC1Q5VXU3 224 aa20.87■□□□□ 0.93
USP19-208ENST00000453664 APLP2Q06481 763 aa20.85■□□□□ 0.93
USP19-208ENST00000453664 YTHDC1Q96MU7 727 aaKnown RBP20.84■□□□□ 0.93
USP19-208ENST00000453664 TRIM26Q12899 539 aaPredicted RBP20.83■□□□□ 0.92
USP19-208ENST00000453664 ABCC9O60706 1549 aa20.82■□□□□ 0.92
USP19-208ENST00000453664 CCDC180Q9P1Z9 1646 aa20.74■□□□□ 0.91
USP19-208ENST00000453664 CCER1Q8TC90 406 aaPredicted RBP20.73■□□□□ 0.91
USP19-208ENST00000453664 PPARGC1BQ86YN6 1023 aaKnown RBP20.71■□□□□ 0.91
USP19-208ENST00000453664 ZCCHC6Q5VYS8 1495 aaKnown RBP20.71■□□□□ 0.91
USP19-208ENST00000453664 TTBK1Q5TCY1 1321 aaPredicted RBP20.68■□□□□ 0.9
USP19-208ENST00000453664 UBTFP17480 764 aaKnown RBP20.54■□□□□ 0.88
USP19-208ENST00000453664 LOC105371045A0A1W2PR82 267 aa20.5■□□□□ 0.87
USP19-208ENST00000453664 NEFLP07196 543 aa20.44■□□□□ 0.86
USP19-208ENST00000453664 RANGAP1P46060 587 aaPredicted RBP20.41■□□□□ 0.86
USP19-208ENST00000453664 PABPN1Q86U42 306 aaKnown RBP eCLIP20.35■□□□□ 0.85
USP19-208ENST00000453664 GTF3C3Q9Y5Q9 886 aa20.22■□□□□ 0.83
USP19-208ENST00000453664 SCRIBQ14160 1630 aa20.18■□□□□ 0.82
USP19-208ENST00000453664 ATP1B4Q9UN42 357 aaPredicted RBP20.14■□□□□ 0.81
USP19-208ENST00000453664 DCAF1Q9Y4B6 1507 aa20.12■□□□□ 0.81
USP19-208ENST00000453664 DIEXFQ68CQ4 756 aaKnown RBP20.02■□□□□ 0.8
USP19-208ENST00000453664 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.92■□□□□ 0.78
USP19-208ENST00000453664 NACADO15069 1562 aa19.9■□□□□ 0.78
USP19-208ENST00000453664 RB1CC1Q8TDY2 1594 aa19.89■□□□□ 0.77
USP19-208ENST00000453664 ACIN1Q9UKV3 1341 aaKnown RBP19.89■□□□□ 0.77
USP19-208ENST00000453664 RTL5Q5HYW3 569 aaPredicted RBP19.82■□□□□ 0.76
USP19-208ENST00000453664 MYO15BQ96JP2 1530 aa19.81■□□□□ 0.76
USP19-208ENST00000453664 RSF1Q96T23 1441 aaPredicted RBP19.75■□□□□ 0.75
USP19-208ENST00000453664 BCANQ96GW7 911 aa19.73■□□□□ 0.75
USP19-208ENST00000453664 DAXXQ9UER7 740 aaPredicted RBP19.73■□□□□ 0.75
USP19-208ENST00000453664 CSRNP3Q8WYN3 585 aa19.71■□□□□ 0.75
USP19-208ENST00000453664 SCAF1Q9H7N4 1312 aaKnown RBP19.71■□□□□ 0.75
USP19-208ENST00000453664 HNRNPUL2Q1KMD3 747 aaKnown RBP19.68■□□□□ 0.74
USP19-208ENST00000453664 ITGAEP38570 1179 aa19.62■□□□□ 0.73
USP19-208ENST00000453664 ZNF316A6NFI3 1004 aaPredicted RBP19.6■□□□□ 0.73
USP19-208ENST00000453664 NEUROD1Q13562 356 aa19.51■□□□□ 0.71
USP19-208ENST00000453664 EIF5BO60841 1220 aaKnown RBP19.48■□□□□ 0.71
USP19-208ENST00000453664 BAZ1AQ9NRL2 1556 aaPredicted RBP19.43■□□□□ 0.7
USP19-208ENST00000453664 CECR2Q9BXF3 1484 aa19.4■□□□□ 0.7
USP19-208ENST00000453664 CDK11AQ9UQ88 783 aaPredicted RBP19.38■□□□□ 0.69
USP19-208ENST00000453664 FAM50AQ14320 339 aaKnown RBP19.34■□□□□ 0.69
USP19-208ENST00000453664 CLSPNQ9HAW4 1339 aa19.33■□□□□ 0.69
USP19-208ENST00000453664 CNGB1Q14028 1251 aaPredicted RBP19.31■□□□□ 0.68
USP19-208ENST00000453664 BAZ1BQ9UIG0 1483 aaKnown RBP19.28■□□□□ 0.68
USP19-208ENST00000453664 EEA1Q15075 1411 aa19.28■□□□□ 0.68
USP19-208ENST00000453664 POLR3GLQ9BT43 218 aa19.22■□□□□ 0.67
USP19-208ENST00000453664 MROH2BQ7Z745 1585 aa19.21■□□□□ 0.67
USP19-208ENST00000453664 WRNQ14191 1432 aaPredicted RBP eCLIP19.2■□□□□ 0.66
USP19-208ENST00000453664 P3H3Q8IVL6 736 aa19.19■□□□□ 0.66
USP19-208ENST00000453664 BCL11AQ9H165 835 aa19.17■□□□□ 0.66
USP19-208ENST00000453664 FBLN2P98095 1184 aa19.14■□□□□ 0.65
USP19-208ENST00000453664 MYT1LQ9UL68 1186 aa19.14■□□□□ 0.65
USP19-208ENST00000453664 ANP32EQ9BTT0 268 aa19.13■□□□□ 0.65
USP19-208ENST00000453664 FKBP8Q14318 412 aa19.11■□□□□ 0.65
USP19-208ENST00000453664 GOLGA3Q08378 1498 aa19.08■□□□□ 0.65
USP19-208ENST00000453664 TRIM52Q96A61 297 aa19.07■□□□□ 0.64
USP19-208ENST00000453664 CLIP1P30622 1438 aa19.07■□□□□ 0.64
USP19-208ENST00000453664 GLIPR1L2Q4G1C9 344 aa19.05■□□□□ 0.64
USP19-208ENST00000453664 ANP32AP39687 249 aaKnown RBP19.04■□□□□ 0.64
USP19-208ENST00000453664 NBR1Q14596 966 aa19.04■□□□□ 0.64
USP19-208ENST00000453664 CEP162Q5TB80 1403 aa19.02■□□□□ 0.64
USP19-208ENST00000453664 TNIKQ9UKE5 1360 aa19.02■□□□□ 0.64
USP19-208ENST00000453664 CCDC88BA6NC98 1476 aa19.01■□□□□ 0.63
USP19-208ENST00000453664 ANP32CO43423 234 aa19.01■□□□□ 0.63
USP19-208ENST00000453664 MIER1Q8N108 512 aa19■□□□□ 0.63
USP19-208ENST00000453664 CEP164Q9UPV0 1460 aa18.97■□□□□ 0.63
USP19-208ENST00000453664 KIF27Q86VH2 1401 aa18.96■□□□□ 0.63
USP19-208ENST00000453664 SMARCA2P51531 1590 aa18.96■□□□□ 0.63
USP19-208ENST00000453664 NPM2Q86SE8 214 aaKnown RBP18.95■□□□□ 0.62
USP19-208ENST00000453664 TOP2AP11388 1531 aaKnown RBP18.93■□□□□ 0.62
USP19-208ENST00000453664 WIZO95785 1651 aa18.92■□□□□ 0.62
USP19-208ENST00000453664 ARID3CA6NKF2 412 aa18.89■□□□□ 0.62
USP19-208ENST00000453664 SOGA1O94964 1423 aa18.84■□□□□ 0.61
USP19-208ENST00000453664 SMARCA4P51532 1647 aa18.81■□□□□ 0.6
USP19-208ENST00000453664 ABCC8Q09428 1581 aa18.79■□□□□ 0.6
USP19-208ENST00000453664 MTUS2Q5JR59 1369 aa18.76■□□□□ 0.59
USP19-208ENST00000453664 ATAD2BQ9ULI0 1458 aa18.76■□□□□ 0.59
USP19-208ENST00000453664 ZBTB47Q9UFB7 747 aaPredicted RBP18.75■□□□□ 0.59
USP19-208ENST00000453664 ZNF777Q9ULD5 760 aaPredicted RBP18.75■□□□□ 0.59
USP19-208ENST00000453664 RTN4Q9NQC3 1192 aaKnown RBP18.73■□□□□ 0.59
USP19-208ENST00000453664 CHMP7Q8WUX9 453 aaPredicted RBP18.73■□□□□ 0.59
USP19-208ENST00000453664 DDX10Q13206 875 aaKnown RBP18.68■□□□□ 0.58
USP19-208ENST00000453664 ZNF326Q5BKZ1 582 aaKnown RBP18.68■□□□□ 0.58
USP19-208ENST00000453664 CUX2O14529 1486 aa18.67■□□□□ 0.58
USP19-208ENST00000453664 CARMIL1Q5VZK9 1371 aa18.66■□□□□ 0.58
USP19-208ENST00000453664 TONSLQ96HA7 1378 aa18.65■□□□□ 0.58
USP19-208ENST00000453664 HNRNPUQ00839 825 aaKnown RBP eCLIP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms