RNA–Protein interactions for RNA: ENST00000530245.5

TPT1-211, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 3

Gene TPT1, Length 530 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-211ENST00000530245 AEBP2Q6ZN18 517 aaPredicted RBP21.95■■□□□ 1.1
TPT1-211ENST00000530245 CHIC1Q5VXU3 224 aa21.25■□□□□ 0.99
TPT1-211ENST00000530245 SENP3Q9H4L4 574 aaPredicted RBP18.68■□□□□ 0.58
TPT1-211ENST00000530245 PHF23Q9BUL5 403 aaPredicted RBP18.65■□□□□ 0.58
TPT1-211ENST00000530245 FOXD1Q16676 465 aa17.34■□□□□ 0.37
TPT1-211ENST00000530245 PLPPR3Q6T4P5 718 aa17.16■□□□□ 0.34
TPT1-211ENST00000530245 PPP6R1Q9UPN7 881 aa16.51■□□□□ 0.23
TPT1-211ENST00000530245 ADRA2BP18089 450 aa16.48■□□□□ 0.23
TPT1-211ENST00000530245 PIAS4Q8N2W9 510 aaPredicted RBP16.3■□□□□ 0.2
TPT1-211ENST00000530245 MSH5O43196 834 aa16.09■□□□□ 0.17
TPT1-211ENST00000530245 SCAF1Q9H7N4 1312 aaKnown RBP15.1■□□□□ 0.01
TPT1-211ENST00000530245 PPP4R3CPQ6ZMV5 832 aa15.08■□□□□ 0
TPT1-211ENST00000530245 POTEDQ86YR6 584 aa15.01□□□□□ -0.01
TPT1-211ENST00000530245 MAPK8IP2Q13387 824 aaPredicted RBP15□□□□□ -0.01
TPT1-211ENST00000530245 DMRT2Q9Y5R5 561 aa14.88□□□□□ -0.03
TPT1-211ENST00000530245 CNKSR2Q8WXI2 1034 aa14.72□□□□□ -0.05
TPT1-211ENST00000530245 NCBP3Q53F19 620 aaKnown RBP14.63□□□□□ -0.07
TPT1-211ENST00000530245 KCNA4P22459 653 aa14.49□□□□□ -0.09
TPT1-211ENST00000530245 HOXD11P31277 338 aaPredicted RBP14.49□□□□□ -0.09
TPT1-211ENST00000530245 RNF216Q9NWF9 866 aaPredicted RBP14.48□□□□□ -0.09
TPT1-211ENST00000530245 NPM3O75607 178 aaKnown RBP14.41□□□□□ -0.1
TPT1-211ENST00000530245 DCAF8L1A6NGE4 600 aa14.19□□□□□ -0.14
TPT1-211ENST00000530245 DNAJC5BQ9UF47 199 aa14.09□□□□□ -0.15
TPT1-211ENST00000530245 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.78□□□□□ -0.2
TPT1-211ENST00000530245 RNF39Q9H2S5 420 aa13.77□□□□□ -0.21
TPT1-211ENST00000530245 SLC4A1APQ9BWU0 796 aaKnown RBP13.76□□□□□ -0.21
TPT1-211ENST00000530245 SLC4A2P04920 1241 aa13.66□□□□□ -0.22
TPT1-211ENST00000530245 C1QBPQ07021 282 aaKnown RBP13.59□□□□□ -0.23
TPT1-211ENST00000530245 U3KPZ7 1027 aaPredicted RBP13.55□□□□□ -0.24
TPT1-211ENST00000530245 CACNB1Q02641 598 aaPredicted RBP13.53□□□□□ -0.24
TPT1-211ENST00000530245 FOXD4L1Q9NU39 408 aa13.42□□□□□ -0.26
TPT1-211ENST00000530245 ZBTB22O15209 634 aa13.34□□□□□ -0.27
TPT1-211ENST00000530245 MYCNP04198 464 aaPredicted RBP13.34□□□□□ -0.27
TPT1-211ENST00000530245 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.32□□□□□ -0.28
TPT1-211ENST00000530245 HNRNPUL2Q1KMD3 747 aaKnown RBP13.32□□□□□ -0.28
TPT1-211ENST00000530245 SAMD1Q6SPF0 538 aaPredicted RBP13.26□□□□□ -0.29
TPT1-211ENST00000530245 APLP2Q06481 763 aa13.23□□□□□ -0.29
TPT1-211ENST00000530245 SPINK5Q9NQ38 1064 aaPredicted RBP13.21□□□□□ -0.29
TPT1-211ENST00000530245 CAPN15O75808 1086 aa13.16□□□□□ -0.3
TPT1-211ENST00000530245 EHMT2Q96KQ7 1210 aa13.09□□□□□ -0.31
TPT1-211ENST00000530245 ZNF219Q9P2Y4 722 aaPredicted RBP13.08□□□□□ -0.32
TPT1-211ENST00000530245 CSRNP3Q8WYN3 585 aa13.07□□□□□ -0.32
TPT1-211ENST00000530245 TRHP20396 242 aaPredicted RBP13.05□□□□□ -0.32
TPT1-211ENST00000530245 DSG3P32926 999 aa13.02□□□□□ -0.33
TPT1-211ENST00000530245 ATXN8OSP0DMR3 200 aa12.98□□□□□ -0.33
TPT1-211ENST00000530245 ATF5Q9Y2D1 282 aaPredicted RBP12.97□□□□□ -0.33
TPT1-211ENST00000530245 ABCB7O75027 752 aa12.9□□□□□ -0.34
TPT1-211ENST00000530245 POLA2Q14181 598 aa12.8□□□□□ -0.36
TPT1-211ENST00000530245 ZBTB12Q9Y330 459 aaPredicted RBP12.61□□□□□ -0.39
TPT1-211ENST00000530245 FBLN2P98095 1184 aa12.45□□□□□ -0.42
TPT1-211ENST00000530245 RBM42Q9BTD8 480 aaKnown RBP12.43□□□□□ -0.42
TPT1-211ENST00000530245 MKRN4PQ13434 485 aaPredicted RBP12.41□□□□□ -0.42
TPT1-211ENST00000530245 OSCARQ8IYS5 282 aa12.39□□□□□ -0.43
TPT1-211ENST00000530245 SPDYE2BA6NHP3 402 aa12.25□□□□□ -0.45
TPT1-211ENST00000530245 SPDYE6P0CI01 402 aa12.25□□□□□ -0.45
TPT1-211ENST00000530245 SPDYE2Q495Y8 402 aa12.25□□□□□ -0.45
TPT1-211ENST00000530245 AKT1S1Q96B36 256 aa12.23□□□□□ -0.45
TPT1-211ENST00000530245 NISCHQ9Y2I1 1504 aa12.21□□□□□ -0.45
TPT1-211ENST00000530245 ZNF692Q9BU19 519 aaPredicted RBP12.14□□□□□ -0.47
TPT1-211ENST00000530245 SSUH2Q9Y2M2 353 aa12.14□□□□□ -0.47
TPT1-211ENST00000530245 REM2Q8IYK8 340 aaPredicted RBP12.09□□□□□ -0.47
TPT1-211ENST00000530245 SPDYE4A6NLX3 237 aa12.02□□□□□ -0.49
TPT1-211ENST00000530245 CHRDL2Q6WN34 429 aa11.98□□□□□ -0.49
TPT1-211ENST00000530245 PABPN1Q86U42 306 aaKnown RBP eCLIP11.97□□□□□ -0.49
TPT1-211ENST00000530245 PITPNM1O00562 1244 aa11.96□□□□□ -0.49
TPT1-211ENST00000530245 SPDYE1Q8NFV5 336 aaPredicted RBP11.93□□□□□ -0.5
TPT1-211ENST00000530245 CLEC11AQ9Y240 323 aa11.85□□□□□ -0.51
TPT1-211ENST00000530245 POTEHQ6S545 545 aa11.84□□□□□ -0.51
TPT1-211ENST00000530245 FKBP8Q14318 412 aa11.83□□□□□ -0.52
TPT1-211ENST00000530245 PROM2Q8N271 834 aa11.83□□□□□ -0.52
TPT1-211ENST00000530245 FXR2P51116 673 aaKnown RBP eCLIP11.79□□□□□ -0.52
TPT1-211ENST00000530245 PIP4P2Q8N4L2 257 aa11.78□□□□□ -0.52
TPT1-211ENST00000530245 STAG3Q9UJ98 1225 aa11.75□□□□□ -0.53
TPT1-211ENST00000530245 PRR29P0C7W0 189 aa11.73□□□□□ -0.53
TPT1-211ENST00000530245 PRKAR2AP13861 404 aaKnown RBP11.65□□□□□ -0.54
TPT1-211ENST00000530245 CHADLQ6NUI6 762 aa11.59□□□□□ -0.55
TPT1-211ENST00000530245 CREBZFQ9NS37 354 aa11.54□□□□□ -0.56
TPT1-211ENST00000530245 FBXO3Q9UK99 471 aa11.48□□□□□ -0.57
TPT1-211ENST00000530245 FARP1Q9Y4F1 1045 aaPredicted RBP11.48□□□□□ -0.57
TPT1-211ENST00000530245 HAX1O00165 279 aa11.43□□□□□ -0.58
TPT1-211ENST00000530245 MNX1P50219 401 aaPredicted RBP11.41□□□□□ -0.58
TPT1-211ENST00000530245 MIER1Q8N108 512 aa11.4□□□□□ -0.58
TPT1-211ENST00000530245 C19orf67A6NJJ6 358 aa11.39□□□□□ -0.59
TPT1-211ENST00000530245 PLEKHG5O94827 1062 aa11.38□□□□□ -0.59
TPT1-211ENST00000530245 PLCD3Q8N3E9 789 aa11.37□□□□□ -0.59
TPT1-211ENST00000530245 NPM1P06748 294 aaKnown RBP eCLIP11.35□□□□□ -0.59
TPT1-211ENST00000530245 VASPP50552 380 aaPredicted RBP11.34□□□□□ -0.59
TPT1-211ENST00000530245 EVX2Q03828 476 aa11.33□□□□□ -0.6
TPT1-211ENST00000530245 CD44P16070 742 aaKnown RBP11.31□□□□□ -0.6
TPT1-211ENST00000530245 SP7Q8TDD2 431 aaPredicted RBP11.3□□□□□ -0.6
TPT1-211ENST00000530245 ZBTB47Q9UFB7 747 aaPredicted RBP11.29□□□□□ -0.6
TPT1-211ENST00000530245 PAK3O75914 559 aaPredicted RBP11.21□□□□□ -0.61
TPT1-211ENST00000530245 ZRANB1Q9UGI0 708 aa11.2□□□□□ -0.62
TPT1-211ENST00000530245 ZNF579Q8NAF0 562 aaKnown RBP11.18□□□□□ -0.62
TPT1-211ENST00000530245 NUBP1P53384 320 aa11.16□□□□□ -0.62
TPT1-211ENST00000530245 RASEFQ8IZ41 740 aa11.16□□□□□ -0.62
TPT1-211ENST00000530245 IFNLR1Q8IU57 520 aaPredicted RBP11.15□□□□□ -0.62
TPT1-211ENST00000530245 KLHL34Q8N239 644 aa11.15□□□□□ -0.62
TPT1-211ENST00000530245 TSPYL2Q9H2G4 693 aaPredicted RBP11.13□□□□□ -0.63
TPT1-211ENST00000530245 CLCN6P51797 869 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms