RNA–Protein interactions for RNA: ENST00000428460.1

CAD-203, Transcript of carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase, humanhuman

TSL 5

Gene CAD, Length 953 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAD-203ENST00000428460 NISCHQ9Y2I1 1504 aa31.02■■■□□ 2.56
CAD-203ENST00000428460 CCDC180Q9P1Z9 1646 aa27.52■■■□□ 2
CAD-203ENST00000428460 ABCC9O60706 1549 aa27.46■■□□□ 1.99
CAD-203ENST00000428460 DNAJC5BQ9UF47 199 aa26.4■■□□□ 1.82
CAD-203ENST00000428460 RB1CC1Q8TDY2 1594 aa25.88■■□□□ 1.73
CAD-203ENST00000428460 ZCCHC6Q5VYS8 1495 aaKnown RBP25.87■■□□□ 1.73
CAD-203ENST00000428460 NACADO15069 1562 aa25.86■■□□□ 1.73
CAD-203ENST00000428460 MYO15BQ96JP2 1530 aa25.82■■□□□ 1.72
CAD-203ENST00000428460 DCAF8L2P0C7V8 631 aa25.78■■□□□ 1.72
CAD-203ENST00000428460 DCAF1Q9Y4B6 1507 aa25.74■■□□□ 1.71
CAD-203ENST00000428460 PABPN1Q86U42 306 aaKnown RBP eCLIP25.44■■□□□ 1.665e-7■□□□□ 11
CAD-203ENST00000428460 UNC13AQ9UPW8 1703 aa25.26■■□□□ 1.63
CAD-203ENST00000428460 BICRAQ9NZM4 1560 aa25.09■■□□□ 1.61
CAD-203ENST00000428460 SCRIBQ14160 1630 aa25.04■■□□□ 1.6
CAD-203ENST00000428460 DNAJC5Q9H3Z4 198 aa24.89■■□□□ 1.58
CAD-203ENST00000428460 SHROOM4Q9ULL8 1493 aa24.89■■□□□ 1.57
CAD-203ENST00000428460 CECR2Q9BXF3 1484 aa24.85■■□□□ 1.57
CAD-203ENST00000428460 CC2D2AQ9P2K1 1620 aa24.8■■□□□ 1.56
CAD-203ENST00000428460 EIF4G1Q04637 1599 aaKnown RBP24.57■■□□□ 1.52
CAD-203ENST00000428460 BAZ1AQ9NRL2 1556 aaPredicted RBP24.06■■□□□ 1.44
CAD-203ENST00000428460 CUX2O14529 1486 aa24.06■■□□□ 1.44
CAD-203ENST00000428460 SMARCA4P51532 1647 aa24.01■■□□□ 1.43
CAD-203ENST00000428460 SMARCA2P51531 1590 aa23.88■■□□□ 1.41
CAD-203ENST00000428460 NCAPD3P42695 1498 aa23.86■■□□□ 1.41
CAD-203ENST00000428460 ATAD2BQ9ULI0 1458 aa23.86■■□□□ 1.41
CAD-203ENST00000428460 MROH2BQ7Z745 1585 aa23.86■■□□□ 1.41
CAD-203ENST00000428460 PEG3Q9GZU2 1588 aa23.82■■□□□ 1.4
CAD-203ENST00000428460 ERCC6Q03468 1493 aa23.82■■□□□ 1.4
CAD-203ENST00000428460 HMGXB3Q12766 1538 aa23.75■■□□□ 1.39
CAD-203ENST00000428460 RSF1Q96T23 1441 aaPredicted RBP23.68■■□□□ 1.38
CAD-203ENST00000428460 BAZ1BQ9UIG0 1483 aaKnown RBP23.68■■□□□ 1.38
CAD-203ENST00000428460 WIZO95785 1651 aa23.58■■□□□ 1.37
CAD-203ENST00000428460 TRIM41Q8WV44 630 aa23.45■■□□□ 1.34
CAD-203ENST00000428460 TOP2AP11388 1531 aaKnown RBP23.42■■□□□ 1.34
CAD-203ENST00000428460 NESP48681 1621 aa23.36■■□□□ 1.33
CAD-203ENST00000428460 THOC2Q8NI27 1593 aaKnown RBP23.31■■□□□ 1.32
CAD-203ENST00000428460 LAMC3Q9Y6N6 1575 aa23.19■■□□□ 1.3
CAD-203ENST00000428460 SUPT5HO00267 1087 aaKnown RBP23.16■■□□□ 1.3
CAD-203ENST00000428460 CADPSQ9ULU8 1353 aa23.15■■□□□ 1.3
CAD-203ENST00000428460 CCDC88BA6NC98 1476 aa23.11■■□□□ 1.29
CAD-203ENST00000428460 KIF21AQ7Z4S6 1674 aa23.07■■□□□ 1.28
CAD-203ENST00000428460 PDS5BQ9NTI5 1447 aa23.07■■□□□ 1.28
CAD-203ENST00000428460 CFTRP13569 1480 aa23.05■■□□□ 1.28
CAD-203ENST00000428460 MRC2Q9UBG0 1479 aa22.87■■□□□ 1.25
CAD-203ENST00000428460 FANCD2Q9BXW9 1451 aa22.86■■□□□ 1.25
CAD-203ENST00000428460 PRDM2Q13029 1718 aa22.85■■□□□ 1.25
CAD-203ENST00000428460 OSCARQ8IYS5 282 aa22.85■■□□□ 1.25
CAD-203ENST00000428460 CEP164Q9UPV0 1460 aa22.84■■□□□ 1.25
CAD-203ENST00000428460 WDR62O43379 1518 aa22.83■■□□□ 1.25
CAD-203ENST00000428460 ABCC8Q09428 1581 aa22.62■■□□□ 1.21
CAD-203ENST00000428460 URB2Q14146 1524 aaKnown RBP22.59■■□□□ 1.21
CAD-203ENST00000428460 RIMBP3CA6NJZ7 1639 aa22.57■■□□□ 1.2
CAD-203ENST00000428460 RIMBP3BA6NNM3 1639 aa22.57■■□□□ 1.2
CAD-203ENST00000428460 RIMBP3Q9UFD9 1639 aa22.57■■□□□ 1.2
CAD-203ENST00000428460 DNMBPQ6XZF7 1577 aa22.51■■□□□ 1.19
CAD-203ENST00000428460 TOPBP1Q92547 1522 aa22.51■■□□□ 1.19
CAD-203ENST00000428460 ARHGEF11O15085 1522 aa22.42■■□□□ 1.18
CAD-203ENST00000428460 CUX1P39880 1505 aa22.37■■□□□ 1.17
CAD-203ENST00000428460 IFT140Q96RY7 1462 aa22.37■■□□□ 1.17
CAD-203ENST00000428460 WRNQ14191 1432 aaPredicted RBP eCLIP22.35■■□□□ 1.17
CAD-203ENST00000428460 TRHP20396 242 aaPredicted RBP22.35■■□□□ 1.17
CAD-203ENST00000428460 POLA1P09884 1462 aaPredicted RBP22.33■■□□□ 1.16
CAD-203ENST00000428460 CYB5RLQ6IPT4 315 aa22.32■■□□□ 1.16
CAD-203ENST00000428460 AEBP2Q6ZN18 517 aaPredicted RBP22.3■■□□□ 1.16
CAD-203ENST00000428460 FGD5Q6ZNL6 1462 aa22.28■■□□□ 1.16
CAD-203ENST00000428460 TOP2BQ02880 1626 aa22.28■■□□□ 1.16
CAD-203ENST00000428460 SOGA1O94964 1423 aa22.26■■□□□ 1.15
CAD-203ENST00000428460 BIVM-ERCC5R4GMW8 1640 aa22.26■■□□□ 1.15
CAD-203ENST00000428460 TARBP1Q13395 1621 aaKnown RBP22.24■■□□□ 1.15
CAD-203ENST00000428460 SYNJ1O43426 1573 aa22.22■■□□□ 1.15
CAD-203ENST00000428460 ZNF608Q9ULD9 1512 aaPredicted RBP22.19■■□□□ 1.14
CAD-203ENST00000428460 WDR97A6NE52 1622 aa22.18■■□□□ 1.14
CAD-203ENST00000428460 RAD54L2Q9Y4B4 1467 aa22.18■■□□□ 1.14
CAD-203ENST00000428460 ARAP1Q96P48 1450 aa22.13■■□□□ 1.13
CAD-203ENST00000428460 ABCA10Q8WWZ4 1543 aa22.12■■□□□ 1.13
CAD-203ENST00000428460 EIF4G3O43432 1585 aaKnown RBP22.11■■□□□ 1.13
CAD-203ENST00000428460 TDRD9Q8NDG6 1382 aaKnown RBP22.08■■□□□ 1.12
CAD-203ENST00000428460 AQRO60306 1485 aaKnown RBP eCLIP22.08■■□□□ 1.124e-6■■■■■ 28.5
CAD-203ENST00000428460 CHD1O14646 1710 aa22.06■■□□□ 1.12
CAD-203ENST00000428460 GAPVD1Q14C86 1478 aa22.01■■□□□ 1.11
CAD-203ENST00000428460 GRIN2BQ13224 1484 aa22■■□□□ 1.11
CAD-203ENST00000428460 ABCA5Q8WWZ7 1642 aa21.98■■□□□ 1.11
CAD-203ENST00000428460 FBLN2P98095 1184 aa21.96■■□□□ 1.11
CAD-203ENST00000428460 MAGI1Q96QZ7 1491 aaPredicted RBP21.94■■□□□ 1.1
CAD-203ENST00000428460 PBRM1Q86U86 1689 aa21.9■■□□□ 1.1
CAD-203ENST00000428460 SNAPC4Q5SXM2 1469 aa21.9■■□□□ 1.1
CAD-203ENST00000428460 KIF27Q86VH2 1401 aa21.89■■□□□ 1.1
CAD-203ENST00000428460 ERICH3Q5RHP9 1530 aa21.88■■□□□ 1.09
CAD-203ENST00000428460 SYNJ2O15056 1496 aa21.83■■□□□ 1.09
CAD-203ENST00000428460 CHMP7Q8WUX9 453 aaPredicted RBP21.81■■□□□ 1.08
CAD-203ENST00000428460 FHAD1B1AJZ9 1412 aa21.79■■□□□ 1.08
CAD-203ENST00000428460 CLASP1Q7Z460 1538 aa21.77■■□□□ 1.08
CAD-203ENST00000428460 ADAMTS12P58397 1594 aa21.76■■□□□ 1.07
CAD-203ENST00000428460 IGF1RP08069 1367 aa21.75■■□□□ 1.07
CAD-203ENST00000428460 CHIC1Q5VXU3 224 aa21.74■■□□□ 1.07
CAD-203ENST00000428460 CUL7Q14999 1698 aa21.7■■□□□ 1.06
CAD-203ENST00000428460 GRIN2AQ12879 1464 aa21.7■■□□□ 1.06
CAD-203ENST00000428460 EEA1Q15075 1411 aa21.63■■□□□ 1.05
CAD-203ENST00000428460 CARMIL1Q5VZK9 1371 aa21.63■■□□□ 1.05
CAD-203ENST00000428460 RUSC2Q8N2Y8 1516 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms