RNA–Protein interactions for RNA: ENST00000359415.8

ARCN1-202, Transcript of archain 1, humanhuman

TSL 1 (best) BASIC

Gene ARCN1, Length 4,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARCN1-202ENST00000359415 NISCHQ9Y2I1 1504 aa14.07□□□□□ -0.16
ARCN1-202ENST00000359415 CHIC1Q5VXU3 224 aa12.09□□□□□ -0.47
ARCN1-202ENST00000359415 DCAF8L2P0C7V8 631 aa12.08□□□□□ -0.48
ARCN1-202ENST00000359415 CCDC180Q9P1Z9 1646 aa12.04□□□□□ -0.48
ARCN1-202ENST00000359415 SHROOM4Q9ULL8 1493 aa11.98□□□□□ -0.49
ARCN1-202ENST00000359415 AEBP2Q6ZN18 517 aaPredicted RBP11.87□□□□□ -0.51
ARCN1-202ENST00000359415 ZCCHC6Q5VYS8 1495 aaKnown RBP11.8□□□□□ -0.52
ARCN1-202ENST00000359415 ABCC9O60706 1549 aa11.71□□□□□ -0.53
ARCN1-202ENST00000359415 SUPT5HO00267 1087 aaKnown RBP11.56□□□□□ -0.56
ARCN1-202ENST00000359415 DCAF1Q9Y4B6 1507 aa11.42□□□□□ -0.58
ARCN1-202ENST00000359415 SCRIBQ14160 1630 aa11.41□□□□□ -0.58
ARCN1-202ENST00000359415 NACADO15069 1562 aa11.25□□□□□ -0.61
ARCN1-202ENST00000359415 MYO15BQ96JP2 1530 aa11.2□□□□□ -0.62
ARCN1-202ENST00000359415 RB1CC1Q8TDY2 1594 aa11.19□□□□□ -0.62
ARCN1-202ENST00000359415 PABPN1Q86U42 306 aaKnown RBP eCLIP11.19□□□□□ -0.62
ARCN1-202ENST00000359415 PHF23Q9BUL5 403 aaPredicted RBP11.09□□□□□ -0.63
ARCN1-202ENST00000359415 CECR2Q9BXF3 1484 aa11.09□□□□□ -0.63
ARCN1-202ENST00000359415 RSF1Q96T23 1441 aaPredicted RBP11.03□□□□□ -0.64
ARCN1-202ENST00000359415 UNC13AQ9UPW8 1703 aa11.02□□□□□ -0.65
ARCN1-202ENST00000359415 MROH2BQ7Z745 1585 aa10.97□□□□□ -0.65
ARCN1-202ENST00000359415 WIZO95785 1651 aa10.9□□□□□ -0.66
ARCN1-202ENST00000359415 BICRAQ9NZM4 1560 aa10.9□□□□□ -0.66
ARCN1-202ENST00000359415 BAZ1AQ9NRL2 1556 aaPredicted RBP10.82□□□□□ -0.68
ARCN1-202ENST00000359415 SMARCA4P51532 1647 aa10.79□□□□□ -0.68
ARCN1-202ENST00000359415 EHMT2Q96KQ7 1210 aa10.78□□□□□ -0.68
ARCN1-202ENST00000359415 FAM9AQ8IZU1 332 aaPredicted RBP10.75□□□□□ -0.69
ARCN1-202ENST00000359415 TRIM41Q8WV44 630 aa10.72□□□□□ -0.69
ARCN1-202ENST00000359415 LOC105371045A0A1W2PR82 267 aa10.7□□□□□ -0.7
ARCN1-202ENST00000359415 CCDC88BA6NC98 1476 aa10.66□□□□□ -0.7
ARCN1-202ENST00000359415 TOP2AP11388 1531 aaKnown RBP10.65□□□□□ -0.7
ARCN1-202ENST00000359415 ATAD2BQ9ULI0 1458 aa10.63□□□□□ -0.71
ARCN1-202ENST00000359415 SMARCA2P51531 1590 aa10.61□□□□□ -0.71
ARCN1-202ENST00000359415 BAZ1BQ9UIG0 1483 aaKnown RBP10.61□□□□□ -0.71
ARCN1-202ENST00000359415 EIF4G1Q04637 1599 aaKnown RBP10.6□□□□□ -0.71
ARCN1-202ENST00000359415 ABCC8Q09428 1581 aa10.58□□□□□ -0.72
ARCN1-202ENST00000359415 SLC24A1O60721 1099 aa10.53□□□□□ -0.72
ARCN1-202ENST00000359415 PEG3Q9GZU2 1588 aa10.51□□□□□ -0.73
ARCN1-202ENST00000359415 DNAJC5BQ9UF47 199 aa10.46□□□□□ -0.73
ARCN1-202ENST00000359415 CC2D2AQ9P2K1 1620 aa10.46□□□□□ -0.74
ARCN1-202ENST00000359415 NCAPD3P42695 1498 aa10.44□□□□□ -0.74
ARCN1-202ENST00000359415 PLPPR3Q6T4P5 718 aa10.41□□□□□ -0.74
ARCN1-202ENST00000359415 SOGA1O94964 1423 aa10.4□□□□□ -0.74
ARCN1-202ENST00000359415 WRNQ14191 1432 aaPredicted RBP eCLIP10.39□□□□□ -0.75
ARCN1-202ENST00000359415 HMGXB3Q12766 1538 aa10.38□□□□□ -0.75
ARCN1-202ENST00000359415 RUSC2Q8N2Y8 1516 aa10.38□□□□□ -0.75
ARCN1-202ENST00000359415 RANGAP1P46060 587 aaPredicted RBP10.36□□□□□ -0.75
ARCN1-202ENST00000359415 PPARGC1BQ86YN6 1023 aaKnown RBP10.35□□□□□ -0.75
ARCN1-202ENST00000359415 SYNJ1O43426 1573 aa10.35□□□□□ -0.75
ARCN1-202ENST00000359415 PCGF6Q9BYE7 350 aa10.32□□□□□ -0.76
ARCN1-202ENST00000359415 TTBK1Q5TCY1 1321 aaPredicted RBP10.31□□□□□ -0.76
ARCN1-202ENST00000359415 NESP48681 1621 aa10.3□□□□□ -0.76
ARCN1-202ENST00000359415 UBTFP17480 764 aaKnown RBP10.3□□□□□ -0.76
ARCN1-202ENST00000359415 CSRNP3Q8WYN3 585 aa10.28□□□□□ -0.76
ARCN1-202ENST00000359415 CFTRP13569 1480 aa10.27□□□□□ -0.77
ARCN1-202ENST00000359415 CADPSQ9ULU8 1353 aa10.27□□□□□ -0.77
ARCN1-202ENST00000359415 KCNA4P22459 653 aa10.26□□□□□ -0.77
ARCN1-202ENST00000359415 CUX1P39880 1505 aa10.23□□□□□ -0.77
ARCN1-202ENST00000359415 TOP2BQ02880 1626 aa10.19□□□□□ -0.78
ARCN1-202ENST00000359415 FANCD2Q9BXW9 1451 aa10.19□□□□□ -0.78
ARCN1-202ENST00000359415 RAPGEF2Q9Y4G8 1499 aa10.14□□□□□ -0.79
ARCN1-202ENST00000359415 CEP162Q5TB80 1403 aa10.14□□□□□ -0.79
ARCN1-202ENST00000359415 BIVM-ERCC5R4GMW8 1640 aa10.13□□□□□ -0.79
ARCN1-202ENST00000359415 FGD5Q6ZNL6 1462 aa10.13□□□□□ -0.79
ARCN1-202ENST00000359415 EEA1Q15075 1411 aa10.12□□□□□ -0.79
ARCN1-202ENST00000359415 RAD54L2Q9Y4B4 1467 aa10.12□□□□□ -0.79
ARCN1-202ENST00000359415 CUX2O14529 1486 aa10.12□□□□□ -0.79
ARCN1-202ENST00000359415 GOLGA3Q08378 1498 aa10.12□□□□□ -0.79
ARCN1-202ENST00000359415 PRDM2Q13029 1718 aa10.09□□□□□ -0.79
ARCN1-202ENST00000359415 RTN4Q9NQC3 1192 aaKnown RBP10.09□□□□□ -0.79
ARCN1-202ENST00000359415 CEP164Q9UPV0 1460 aa10.09□□□□□ -0.79
ARCN1-202ENST00000359415 KIF27Q86VH2 1401 aa10.09□□□□□ -0.79
ARCN1-202ENST00000359415 TNIKQ9UKE5 1360 aa10.09□□□□□ -0.79
ARCN1-202ENST00000359415 TRIM26Q12899 539 aaPredicted RBP10.08□□□□□ -0.8
ARCN1-202ENST00000359415 TOPBP1Q92547 1522 aa10.06□□□□□ -0.8
ARCN1-202ENST00000359415 URB2Q14146 1524 aaKnown RBP10.05□□□□□ -0.8
ARCN1-202ENST00000359415 KIF21AQ7Z4S6 1674 aa10.05□□□□□ -0.8
ARCN1-202ENST00000359415 TDRD9Q8NDG6 1382 aaKnown RBP10.05□□□□□ -0.8
ARCN1-202ENST00000359415 PDS5BQ9NTI5 1447 aa10.05□□□□□ -0.8
ARCN1-202ENST00000359415 LAMC3Q9Y6N6 1575 aa10.04□□□□□ -0.8
ARCN1-202ENST00000359415 POLA1P09884 1462 aaPredicted RBP10.04□□□□□ -0.8
ARCN1-202ENST00000359415 CLIP1P30622 1438 aa10.03□□□□□ -0.8
ARCN1-202ENST00000359415 P3H3Q8IVL6 736 aa10.03□□□□□ -0.8
ARCN1-202ENST00000359415 IGF1RP08069 1367 aa10.02□□□□□ -0.81
ARCN1-202ENST00000359415 KIF21BO75037 1637 aa10.02□□□□□ -0.81
ARCN1-202ENST00000359415 DNMBPQ6XZF7 1577 aa10.02□□□□□ -0.81
ARCN1-202ENST00000359415 PRXQ9BXM0 1461 aa10□□□□□ -0.81
ARCN1-202ENST00000359415 CARMIL1Q5VZK9 1371 aa9.99□□□□□ -0.81
ARCN1-202ENST00000359415 ERCC6Q03468 1493 aa9.99□□□□□ -0.81
ARCN1-202ENST00000359415 ADRA2BP18089 450 aa9.98□□□□□ -0.81
ARCN1-202ENST00000359415 ATP1B4Q9UN42 357 aaPredicted RBP9.98□□□□□ -0.81
ARCN1-202ENST00000359415 APLP2Q06481 763 aa9.95□□□□□ -0.82
ARCN1-202ENST00000359415 AQRO60306 1485 aaKnown RBP eCLIP9.95□□□□□ -0.822e-6■■■■□ 26.7
ARCN1-202ENST00000359415 ABCA10Q8WWZ4 1543 aa9.93□□□□□ -0.82
ARCN1-202ENST00000359415 HRCP23327 699 aa9.93□□□□□ -0.82
ARCN1-202ENST00000359415 ERICH3Q5RHP9 1530 aa9.92□□□□□ -0.82
ARCN1-202ENST00000359415 MRC2Q9UBG0 1479 aa9.91□□□□□ -0.82
ARCN1-202ENST00000359415 GAPVD1Q14C86 1478 aa9.9□□□□□ -0.82
ARCN1-202ENST00000359415 FBLN2P98095 1184 aa9.9□□□□□ -0.82
ARCN1-202ENST00000359415 ARAP1Q96P48 1450 aa9.9□□□□□ -0.82
ARCN1-202ENST00000359415 ZNF608Q9ULD9 1512 aaPredicted RBP9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms