RNA–Protein interactions for RNA: ENST00000053867.7

GRN-201, Transcript of granulin precursor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GRN, Length 2,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-201ENST00000053867 NISCHQ9Y2I1 1504 aa34.01■■■■□ 3.04
GRN-201ENST00000053867 CCDC180Q9P1Z9 1646 aa29.32■■■□□ 2.28
GRN-201ENST00000053867 ZCCHC6Q5VYS8 1495 aaKnown RBP28.62■■■□□ 2.17
GRN-201ENST00000053867 SHROOM4Q9ULL8 1493 aa28.22■■■□□ 2.11
GRN-201ENST00000053867 DCAF8L2P0C7V8 631 aa28.22■■■□□ 2.11
GRN-201ENST00000053867 DCAF1Q9Y4B6 1507 aa27.98■■■□□ 2.07
GRN-201ENST00000053867 ABCC9O60706 1549 aa27.77■■■□□ 2.04
GRN-201ENST00000053867 MYO15BQ96JP2 1530 aa27.49■■□□□ 1.99
GRN-201ENST00000053867 NACADO15069 1562 aa27.29■■□□□ 1.96
GRN-201ENST00000053867 SUPT5HO00267 1087 aaKnown RBP27.28■■□□□ 1.96
GRN-201ENST00000053867 SCRIBQ14160 1630 aa27.25■■□□□ 1.95
GRN-201ENST00000053867 RB1CC1Q8TDY2 1594 aa27■■□□□ 1.91
GRN-201ENST00000053867 UNC13AQ9UPW8 1703 aa26.59■■□□□ 1.85
GRN-201ENST00000053867 RSF1Q96T23 1441 aaPredicted RBP26.58■■□□□ 1.85
GRN-201ENST00000053867 CECR2Q9BXF3 1484 aa26.56■■□□□ 1.84
GRN-201ENST00000053867 MROH2BQ7Z745 1585 aa26.39■■□□□ 1.81
GRN-201ENST00000053867 PABPN1Q86U42 306 aaKnown RBP eCLIP26.36■■□□□ 1.81
GRN-201ENST00000053867 BICRAQ9NZM4 1560 aa26.35■■□□□ 1.81
GRN-201ENST00000053867 CHIC1Q5VXU3 224 aa26.22■■□□□ 1.79
GRN-201ENST00000053867 WIZO95785 1651 aa26.18■■□□□ 1.78
GRN-201ENST00000053867 BAZ1AQ9NRL2 1556 aaPredicted RBP26.16■■□□□ 1.78
GRN-201ENST00000053867 SMARCA4P51532 1647 aa26.06■■□□□ 1.76
GRN-201ENST00000053867 TOP2AP11388 1531 aaKnown RBP25.78■■□□□ 1.72
GRN-201ENST00000053867 PEG3Q9GZU2 1588 aa25.66■■□□□ 1.7
GRN-201ENST00000053867 CCDC88BA6NC98 1476 aa25.65■■□□□ 1.7
GRN-201ENST00000053867 SMARCA2P51531 1590 aa25.62■■□□□ 1.69
GRN-201ENST00000053867 ATAD2BQ9ULI0 1458 aa25.61■■□□□ 1.69
GRN-201ENST00000053867 EIF4G1Q04637 1599 aaKnown RBP25.53■■□□□ 1.68
GRN-201ENST00000053867 TRIM41Q8WV44 630 aa25.5■■□□□ 1.67
GRN-201ENST00000053867 BAZ1BQ9UIG0 1483 aaKnown RBP25.43■■□□□ 1.66
GRN-201ENST00000053867 LOC105371045A0A1W2PR82 267 aa25.37■■□□□ 1.65
GRN-201ENST00000053867 NCAPD3P42695 1498 aa25.28■■□□□ 1.64
GRN-201ENST00000053867 ABCC8Q09428 1581 aa25.27■■□□□ 1.64
GRN-201ENST00000053867 FAM9AQ8IZU1 332 aaPredicted RBP25.21■■□□□ 1.63
GRN-201ENST00000053867 HMGXB3Q12766 1538 aa25.19■■□□□ 1.62
GRN-201ENST00000053867 CC2D2AQ9P2K1 1620 aa25.05■■□□□ 1.6
GRN-201ENST00000053867 EHMT2Q96KQ7 1210 aa24.96■■□□□ 1.59
GRN-201ENST00000053867 WRNQ14191 1432 aaPredicted RBP eCLIP24.96■■□□□ 1.59
GRN-201ENST00000053867 SYNJ1O43426 1573 aa24.89■■□□□ 1.57
GRN-201ENST00000053867 SOGA1O94964 1423 aa24.88■■□□□ 1.57
GRN-201ENST00000053867 CFTRP13569 1480 aa24.83■■□□□ 1.57
GRN-201ENST00000053867 RUSC2Q8N2Y8 1516 aa24.82■■□□□ 1.56
GRN-201ENST00000053867 CADPSQ9ULU8 1353 aa24.69■■□□□ 1.54
GRN-201ENST00000053867 DNAJC5BQ9UF47 199 aa24.68■■□□□ 1.54
GRN-201ENST00000053867 TOP2BQ02880 1626 aa24.66■■□□□ 1.54
GRN-201ENST00000053867 CSRNP3Q8WYN3 585 aa24.64■■□□□ 1.53
GRN-201ENST00000053867 CUX1P39880 1505 aa24.62■■□□□ 1.53
GRN-201ENST00000053867 EEA1Q15075 1411 aa24.61■■□□□ 1.53
GRN-201ENST00000053867 BIVM-ERCC5R4GMW8 1640 aa24.6■■□□□ 1.53
GRN-201ENST00000053867 PRDM2Q13029 1718 aa24.55■■□□□ 1.52
GRN-201ENST00000053867 NESP48681 1621 aa24.52■■□□□ 1.52
GRN-201ENST00000053867 PCGF6Q9BYE7 350 aa24.45■■□□□ 1.5
GRN-201ENST00000053867 FANCD2Q9BXW9 1451 aa24.43■■□□□ 1.5
GRN-201ENST00000053867 TNIKQ9UKE5 1360 aa24.4■■□□□ 1.5
GRN-201ENST00000053867 UBTFP17480 764 aaKnown RBP24.38■■□□□ 1.49
GRN-201ENST00000053867 GOLGA3Q08378 1498 aa24.37■■□□□ 1.49
GRN-201ENST00000053867 CEP162Q5TB80 1403 aa24.34■■□□□ 1.49
GRN-201ENST00000053867 CEP164Q9UPV0 1460 aa24.34■■□□□ 1.49
GRN-201ENST00000053867 KIF21BO75037 1637 aa24.33■■□□□ 1.48
GRN-201ENST00000053867 RAPGEF2Q9Y4G8 1499 aa24.31■■□□□ 1.48
GRN-201ENST00000053867 LAMC3Q9Y6N6 1575 aa24.3■■□□□ 1.48
GRN-201ENST00000053867 FGD5Q6ZNL6 1462 aa24.28■■□□□ 1.48
GRN-201ENST00000053867 KIF27Q86VH2 1401 aa24.25■■□□□ 1.47
GRN-201ENST00000053867 TRIM26Q12899 539 aaPredicted RBP24.22■■□□□ 1.47
GRN-201ENST00000053867 PRXQ9BXM0 1461 aa24.22■■□□□ 1.47
GRN-201ENST00000053867 PPARGC1BQ86YN6 1023 aaKnown RBP24.21■■□□□ 1.47
GRN-201ENST00000053867 TOPBP1Q92547 1522 aa24.2■■□□□ 1.46
GRN-201ENST00000053867 CUX2O14529 1486 aa24.19■■□□□ 1.46
GRN-201ENST00000053867 DNMBPQ6XZF7 1577 aa24.19■■□□□ 1.46
GRN-201ENST00000053867 URB2Q14146 1524 aaKnown RBP24.15■■□□□ 1.46
GRN-201ENST00000053867 RAD54L2Q9Y4B4 1467 aa24.14■■□□□ 1.46
GRN-201ENST00000053867 PDS5BQ9NTI5 1447 aa24.14■■□□□ 1.45
GRN-201ENST00000053867 POLA1P09884 1462 aaPredicted RBP24.13■■□□□ 1.45
GRN-201ENST00000053867 IGF1RP08069 1367 aa24.12■■□□□ 1.45
GRN-201ENST00000053867 KIF21AQ7Z4S6 1674 aa24.09■■□□□ 1.45
GRN-201ENST00000053867 ERICH3Q5RHP9 1530 aa24.09■■□□□ 1.45
GRN-201ENST00000053867 RANGAP1P46060 587 aaPredicted RBP24.06■■□□□ 1.44
GRN-201ENST00000053867 CLIP1P30622 1438 aa24.06■■□□□ 1.44
GRN-201ENST00000053867 ABCA10Q8WWZ4 1543 aa24.02■■□□□ 1.44
GRN-201ENST00000053867 CARMIL1Q5VZK9 1371 aa23.96■■□□□ 1.43
GRN-201ENST00000053867 TTBK1Q5TCY1 1321 aaPredicted RBP23.93■■□□□ 1.42
GRN-201ENST00000053867 HRCP23327 699 aa23.9■■□□□ 1.42
GRN-201ENST00000053867 TDRD9Q8NDG6 1382 aaKnown RBP23.88■■□□□ 1.41
GRN-201ENST00000053867 WDR97A6NE52 1622 aa23.88■■□□□ 1.41
GRN-201ENST00000053867 VPS8Q8N3P4 1428 aa23.87■■□□□ 1.41
GRN-201ENST00000053867 ARAP1Q96P48 1450 aa23.83■■□□□ 1.41
GRN-201ENST00000053867 MRC2Q9UBG0 1479 aa23.82■■□□□ 1.4
GRN-201ENST00000053867 TARBP1Q13395 1621 aaKnown RBP23.8■■□□□ 1.4
GRN-201ENST00000053867 ABCA5Q8WWZ7 1642 aa23.79■■□□□ 1.4
GRN-201ENST00000053867 ARHGAP35Q9NRY4 1499 aa23.77■■□□□ 1.4
GRN-201ENST00000053867 GAPVD1Q14C86 1478 aa23.76■■□□□ 1.39
GRN-201ENST00000053867 CUL7Q14999 1698 aa23.7■■□□□ 1.38
GRN-201ENST00000053867 WDR62O43379 1518 aa23.68■■□□□ 1.38
GRN-201ENST00000053867 AQRO60306 1485 aaKnown RBP eCLIP23.67■■□□□ 1.382e-7■■■■■ 29.1
GRN-201ENST00000053867 ERCC6Q03468 1493 aa23.66■■□□□ 1.38
GRN-201ENST00000053867 ZNF608Q9ULD9 1512 aaPredicted RBP23.62■■□□□ 1.37
GRN-201ENST00000053867 APLP2Q06481 763 aa23.59■■□□□ 1.37
GRN-201ENST00000053867 THOC2Q8NI27 1593 aaKnown RBP23.58■■□□□ 1.36
GRN-201ENST00000053867 P3H3Q8IVL6 736 aa23.58■■□□□ 1.36
GRN-201ENST00000053867 KANK4Q5T7N3 995 aaPredicted RBP23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms