RNA–Protein interactions for RNA: ENST00000533657.5

CAPRIN1-215, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 2,774 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-215ENST00000533657 NISCHQ9Y2I1 1504 aa24.33■■□□□ 1.49
CAPRIN1-215ENST00000533657 CCDC180Q9P1Z9 1646 aa21.61■■□□□ 1.05
CAPRIN1-215ENST00000533657 ZCCHC6Q5VYS8 1495 aaKnown RBP20.41■□□□□ 0.86
CAPRIN1-215ENST00000533657 ABCC9O60706 1549 aa20.35■□□□□ 0.85
CAPRIN1-215ENST00000533657 DCAF1Q9Y4B6 1507 aa20.31■□□□□ 0.84
CAPRIN1-215ENST00000533657 MYO15BQ96JP2 1530 aa20.26■□□□□ 0.83
CAPRIN1-215ENST00000533657 NACADO15069 1562 aa20.11■□□□□ 0.81
CAPRIN1-215ENST00000533657 RB1CC1Q8TDY2 1594 aa19.99■□□□□ 0.79
CAPRIN1-215ENST00000533657 DCAF8L2P0C7V8 631 aa19.69■□□□□ 0.74
CAPRIN1-215ENST00000533657 UNC13AQ9UPW8 1703 aa19.59■□□□□ 0.73
CAPRIN1-215ENST00000533657 SCRIBQ14160 1630 aa19.51■□□□□ 0.71
CAPRIN1-215ENST00000533657 SHROOM4Q9ULL8 1493 aa19.37■□□□□ 0.69
CAPRIN1-215ENST00000533657 BICRAQ9NZM4 1560 aa19.37■□□□□ 0.69
CAPRIN1-215ENST00000533657 PABPN1Q86U42 306 aaKnown RBP eCLIP18.96■□□□□ 0.63
CAPRIN1-215ENST00000533657 BAZ1AQ9NRL2 1556 aaPredicted RBP18.85■□□□□ 0.61
CAPRIN1-215ENST00000533657 SMARCA4P51532 1647 aa18.81■□□□□ 0.6
CAPRIN1-215ENST00000533657 CECR2Q9BXF3 1484 aa18.78■□□□□ 0.6
CAPRIN1-215ENST00000533657 EIF4G1Q04637 1599 aaKnown RBP18.78■□□□□ 0.6
CAPRIN1-215ENST00000533657 PEG3Q9GZU2 1588 aa18.73■□□□□ 0.59
CAPRIN1-215ENST00000533657 MROH2BQ7Z745 1585 aa18.7■□□□□ 0.58
CAPRIN1-215ENST00000533657 RSF1Q96T23 1441 aaPredicted RBP18.64■□□□□ 0.57
CAPRIN1-215ENST00000533657 SMARCA2P51531 1590 aa18.6■□□□□ 0.57
CAPRIN1-215ENST00000533657 CC2D2AQ9P2K1 1620 aa18.57■□□□□ 0.56
CAPRIN1-215ENST00000533657 WIZO95785 1651 aa18.53■□□□□ 0.56
CAPRIN1-215ENST00000533657 ATAD2BQ9ULI0 1458 aa18.53■□□□□ 0.56
CAPRIN1-215ENST00000533657 HMGXB3Q12766 1538 aa18.53■□□□□ 0.56
CAPRIN1-215ENST00000533657 NCAPD3P42695 1498 aa18.5■□□□□ 0.55
CAPRIN1-215ENST00000533657 TOP2AP11388 1531 aaKnown RBP18.45■□□□□ 0.54
CAPRIN1-215ENST00000533657 BAZ1BQ9UIG0 1483 aaKnown RBP18.38■□□□□ 0.53
CAPRIN1-215ENST00000533657 SUPT5HO00267 1087 aaKnown RBP18.22■□□□□ 0.51
CAPRIN1-215ENST00000533657 DNAJC5BQ9UF47 199 aa18.18■□□□□ 0.5
CAPRIN1-215ENST00000533657 CCDC88BA6NC98 1476 aa18.12■□□□□ 0.49
CAPRIN1-215ENST00000533657 PRDM2Q13029 1718 aa18.05■□□□□ 0.48
CAPRIN1-215ENST00000533657 LAMC3Q9Y6N6 1575 aa17.99■□□□□ 0.47
CAPRIN1-215ENST00000533657 CFTRP13569 1480 aa17.96■□□□□ 0.47
CAPRIN1-215ENST00000533657 CADPSQ9ULU8 1353 aa17.9■□□□□ 0.46
CAPRIN1-215ENST00000533657 NESP48681 1621 aa17.76■□□□□ 0.43
CAPRIN1-215ENST00000533657 PDS5BQ9NTI5 1447 aa17.74■□□□□ 0.43
CAPRIN1-215ENST00000533657 KIF21AQ7Z4S6 1674 aa17.72■□□□□ 0.43
CAPRIN1-215ENST00000533657 FANCD2Q9BXW9 1451 aa17.7■□□□□ 0.42
CAPRIN1-215ENST00000533657 CEP164Q9UPV0 1460 aa17.66■□□□□ 0.42
CAPRIN1-215ENST00000533657 BIVM-ERCC5R4GMW8 1640 aa17.63■□□□□ 0.41
CAPRIN1-215ENST00000533657 ABCC8Q09428 1581 aa17.6■□□□□ 0.41
CAPRIN1-215ENST00000533657 THOC2Q8NI27 1593 aaKnown RBP17.59■□□□□ 0.41
CAPRIN1-215ENST00000533657 DNMBPQ6XZF7 1577 aa17.59■□□□□ 0.41
CAPRIN1-215ENST00000533657 TOP2BQ02880 1626 aa17.58■□□□□ 0.41
CAPRIN1-215ENST00000533657 MRC2Q9UBG0 1479 aa17.57■□□□□ 0.4
CAPRIN1-215ENST00000533657 WDR62O43379 1518 aa17.56■□□□□ 0.4
CAPRIN1-215ENST00000533657 WRNQ14191 1432 aaPredicted RBP eCLIP17.55■□□□□ 0.4
CAPRIN1-215ENST00000533657 CUX1P39880 1505 aa17.54■□□□□ 0.4
CAPRIN1-215ENST00000533657 SYNJ1O43426 1573 aa17.53■□□□□ 0.4
CAPRIN1-215ENST00000533657 ERCC6Q03468 1493 aa17.52■□□□□ 0.4
CAPRIN1-215ENST00000533657 URB2Q14146 1524 aaKnown RBP17.52■□□□□ 0.39
CAPRIN1-215ENST00000533657 TOPBP1Q92547 1522 aa17.5■□□□□ 0.39
CAPRIN1-215ENST00000533657 CHIC1Q5VXU3 224 aa17.41■□□□□ 0.38
CAPRIN1-215ENST00000533657 WDR97A6NE52 1622 aa17.4■□□□□ 0.38
CAPRIN1-215ENST00000533657 FGD5Q6ZNL6 1462 aa17.38■□□□□ 0.37
CAPRIN1-215ENST00000533657 POLA1P09884 1462 aaPredicted RBP17.36■□□□□ 0.37
CAPRIN1-215ENST00000533657 TARBP1Q13395 1621 aaKnown RBP17.35■□□□□ 0.37
CAPRIN1-215ENST00000533657 CUX2O14529 1486 aa17.35■□□□□ 0.37
CAPRIN1-215ENST00000533657 IFT140Q96RY7 1462 aa17.31■□□□□ 0.36
CAPRIN1-215ENST00000533657 ABCA10Q8WWZ4 1543 aa17.31■□□□□ 0.36
CAPRIN1-215ENST00000533657 TRIM41Q8WV44 630 aa17.28■□□□□ 0.36
CAPRIN1-215ENST00000533657 ABCA5Q8WWZ7 1642 aa17.25■□□□□ 0.35
CAPRIN1-215ENST00000533657 SOGA1O94964 1423 aa17.24■□□□□ 0.35
CAPRIN1-215ENST00000533657 EEA1Q15075 1411 aa17.23■□□□□ 0.35
CAPRIN1-215ENST00000533657 RAD54L2Q9Y4B4 1467 aa17.2■□□□□ 0.34
CAPRIN1-215ENST00000533657 PBRM1Q86U86 1689 aa17.16■□□□□ 0.34
CAPRIN1-215ENST00000533657 KIF27Q86VH2 1401 aa17.16■□□□□ 0.34
CAPRIN1-215ENST00000533657 EIF4G3O43432 1585 aaKnown RBP17.15■□□□□ 0.34
CAPRIN1-215ENST00000533657 ERICH3Q5RHP9 1530 aa17.14■□□□□ 0.33
CAPRIN1-215ENST00000533657 CUL7Q14999 1698 aa17.11■□□□□ 0.33
CAPRIN1-215ENST00000533657 GAPVD1Q14C86 1478 aa17.09■□□□□ 0.33
CAPRIN1-215ENST00000533657 ZNF608Q9ULD9 1512 aaPredicted RBP17.07■□□□□ 0.32
CAPRIN1-215ENST00000533657 GRIN2BQ13224 1484 aa17.06■□□□□ 0.32
CAPRIN1-215ENST00000533657 RUSC2Q8N2Y8 1516 aa17.05■□□□□ 0.32
CAPRIN1-215ENST00000533657 KIF21BO75037 1637 aa17.05■□□□□ 0.32
CAPRIN1-215ENST00000533657 ADAMTS12P58397 1594 aa17.03■□□□□ 0.32
CAPRIN1-215ENST00000533657 MAGI1Q96QZ7 1491 aaPredicted RBP17.02■□□□□ 0.31
CAPRIN1-215ENST00000533657 TDRD9Q8NDG6 1382 aaKnown RBP17■□□□□ 0.31
CAPRIN1-215ENST00000533657 IGF1RP08069 1367 aa17■□□□□ 0.31
CAPRIN1-215ENST00000533657 AQRO60306 1485 aaKnown RBP eCLIP17■□□□□ 0.312e-7■■■■■ 29.8
CAPRIN1-215ENST00000533657 PRXQ9BXM0 1461 aa17■□□□□ 0.31
CAPRIN1-215ENST00000533657 FHAD1B1AJZ9 1412 aa16.95■□□□□ 0.3
CAPRIN1-215ENST00000533657 CSRNP3Q8WYN3 585 aa16.94■□□□□ 0.3
CAPRIN1-215ENST00000533657 SNAPC4Q5SXM2 1469 aa16.93■□□□□ 0.3
CAPRIN1-215ENST00000533657 SYNJ2O15056 1496 aa16.91■□□□□ 0.3
CAPRIN1-215ENST00000533657 RAPGEF2Q9Y4G8 1499 aa16.91■□□□□ 0.3
CAPRIN1-215ENST00000533657 CARMIL1Q5VZK9 1371 aa16.89■□□□□ 0.29
CAPRIN1-215ENST00000533657 GOLGA3Q08378 1498 aa16.88■□□□□ 0.29
CAPRIN1-215ENST00000533657 CHD1O14646 1710 aa16.86■□□□□ 0.29
CAPRIN1-215ENST00000533657 CTTNBP2Q8WZ74 1663 aa16.85■□□□□ 0.29
CAPRIN1-215ENST00000533657 GRIN2AQ12879 1464 aa16.84■□□□□ 0.29
CAPRIN1-215ENST00000533657 NUP160Q12769 1436 aa16.79■□□□□ 0.28
CAPRIN1-215ENST00000533657 FAM9AQ8IZU1 332 aaPredicted RBP16.77■□□□□ 0.27
CAPRIN1-215ENST00000533657 CEP170Q5SW79 1584 aa16.76■□□□□ 0.27
CAPRIN1-215ENST00000533657 TNIKQ9UKE5 1360 aa16.74■□□□□ 0.27
CAPRIN1-215ENST00000533657 PELP1Q8IZL8 1130 aaKnown RBP16.72■□□□□ 0.27
CAPRIN1-215ENST00000533657 CLASP1Q7Z460 1538 aa16.72■□□□□ 0.27
CAPRIN1-215ENST00000533657 KIAA0586Q9BVV6 1533 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms