RNA–Protein interactions for RNA: ENST00000589265.5

GRN-214, Transcript of granulin precursor, humanhuman

TSL 5 BASIC

Gene GRN, Length 1,632 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-214ENST00000589265 NISCHQ9Y2I1 1504 aa37.61■■■■□ 3.61
GRN-214ENST00000589265 CCDC180Q9P1Z9 1646 aa33.26■■■□□ 2.91
GRN-214ENST00000589265 ABCC9O60706 1549 aa32.03■■■□□ 2.72
GRN-214ENST00000589265 ZCCHC6Q5VYS8 1495 aaKnown RBP31.46■■■□□ 2.63
GRN-214ENST00000589265 DCAF8L2P0C7V8 631 aa31.24■■■□□ 2.59
GRN-214ENST00000589265 DCAF1Q9Y4B6 1507 aa31.08■■■□□ 2.57
GRN-214ENST00000589265 NACADO15069 1562 aa31.06■■■□□ 2.56
GRN-214ENST00000589265 RB1CC1Q8TDY2 1594 aa31.01■■■□□ 2.55
GRN-214ENST00000589265 MYO15BQ96JP2 1530 aa30.98■■■□□ 2.55
GRN-214ENST00000589265 UNC13AQ9UPW8 1703 aa30.49■■■□□ 2.47
GRN-214ENST00000589265 SCRIBQ14160 1630 aa30.45■■■□□ 2.47
GRN-214ENST00000589265 SHROOM4Q9ULL8 1493 aa30.16■■■□□ 2.42
GRN-214ENST00000589265 BICRAQ9NZM4 1560 aa30.08■■■□□ 2.41
GRN-214ENST00000589265 PABPN1Q86U42 306 aaKnown RBP eCLIP29.97■■■□□ 2.39
GRN-214ENST00000589265 CECR2Q9BXF3 1484 aa29.27■■■□□ 2.28
GRN-214ENST00000589265 EIF4G1Q04637 1599 aaKnown RBP29.23■■■□□ 2.27
GRN-214ENST00000589265 SMARCA4P51532 1647 aa29.13■■■□□ 2.25
GRN-214ENST00000589265 BAZ1AQ9NRL2 1556 aaPredicted RBP29.12■■■□□ 2.25
GRN-214ENST00000589265 MROH2BQ7Z745 1585 aa29.04■■■□□ 2.24
GRN-214ENST00000589265 CC2D2AQ9P2K1 1620 aa29.01■■■□□ 2.23
GRN-214ENST00000589265 RSF1Q96T23 1441 aaPredicted RBP28.85■■■□□ 2.21
GRN-214ENST00000589265 WIZO95785 1651 aa28.83■■■□□ 2.21
GRN-214ENST00000589265 DNAJC5BQ9UF47 199 aa28.82■■■□□ 2.2
GRN-214ENST00000589265 SMARCA2P51531 1590 aa28.77■■■□□ 2.2
GRN-214ENST00000589265 PEG3Q9GZU2 1588 aa28.77■■■□□ 2.2
GRN-214ENST00000589265 ATAD2BQ9ULI0 1458 aa28.76■■■□□ 2.19
GRN-214ENST00000589265 NCAPD3P42695 1498 aa28.61■■■□□ 2.17
GRN-214ENST00000589265 SUPT5HO00267 1087 aaKnown RBP28.6■■■□□ 2.17
GRN-214ENST00000589265 HMGXB3Q12766 1538 aa28.59■■■□□ 2.17
GRN-214ENST00000589265 BAZ1BQ9UIG0 1483 aaKnown RBP28.59■■■□□ 2.17
GRN-214ENST00000589265 TOP2AP11388 1531 aaKnown RBP28.47■■■□□ 2.15
GRN-214ENST00000589265 CCDC88BA6NC98 1476 aa28.11■■■□□ 2.09
GRN-214ENST00000589265 NESP48681 1621 aa27.89■■■□□ 2.05
GRN-214ENST00000589265 LAMC3Q9Y6N6 1575 aa27.85■■■□□ 2.05
GRN-214ENST00000589265 PRDM2Q13029 1718 aa27.82■■■□□ 2.04
GRN-214ENST00000589265 CADPSQ9ULU8 1353 aa27.81■■■□□ 2.04
GRN-214ENST00000589265 CFTRP13569 1480 aa27.79■■■□□ 2.04
GRN-214ENST00000589265 KIF21AQ7Z4S6 1674 aa27.66■■■□□ 2.02
GRN-214ENST00000589265 PDS5BQ9NTI5 1447 aa27.58■■■□□ 2
GRN-214ENST00000589265 FANCD2Q9BXW9 1451 aa27.56■■■□□ 2
GRN-214ENST00000589265 ERCC6Q03468 1493 aa27.54■■■□□ 2
GRN-214ENST00000589265 CEP164Q9UPV0 1460 aa27.48■■□□□ 1.99
GRN-214ENST00000589265 ABCC8Q09428 1581 aa27.36■■□□□ 1.97
GRN-214ENST00000589265 THOC2Q8NI27 1593 aaKnown RBP27.36■■□□□ 1.97
GRN-214ENST00000589265 MRC2Q9UBG0 1479 aa27.31■■□□□ 1.96
GRN-214ENST00000589265 URB2Q14146 1524 aaKnown RBP27.27■■□□□ 1.96
GRN-214ENST00000589265 WDR62O43379 1518 aa27.22■■□□□ 1.95
GRN-214ENST00000589265 CUX1P39880 1505 aa27.22■■□□□ 1.95
GRN-214ENST00000589265 DNMBPQ6XZF7 1577 aa27.22■■□□□ 1.95
GRN-214ENST00000589265 WRNQ14191 1432 aaPredicted RBP eCLIP27.2■■□□□ 1.95
GRN-214ENST00000589265 SYNJ1O43426 1573 aa27.19■■□□□ 1.94
GRN-214ENST00000589265 TOPBP1Q92547 1522 aa27.19■■□□□ 1.94
GRN-214ENST00000589265 BIVM-ERCC5R4GMW8 1640 aa27.15■■□□□ 1.94
GRN-214ENST00000589265 TOP2BQ02880 1626 aa27.12■■□□□ 1.93
GRN-214ENST00000589265 FGD5Q6ZNL6 1462 aa27.03■■□□□ 1.92
GRN-214ENST00000589265 POLA1P09884 1462 aaPredicted RBP26.99■■□□□ 1.91
GRN-214ENST00000589265 CUX2O14529 1486 aa26.97■■□□□ 1.91
GRN-214ENST00000589265 CHIC1Q5VXU3 224 aa26.95■■□□□ 1.91
GRN-214ENST00000589265 TRIM41Q8WV44 630 aa26.93■■□□□ 1.9
GRN-214ENST00000589265 RAD54L2Q9Y4B4 1467 aa26.89■■□□□ 1.9
GRN-214ENST00000589265 TARBP1Q13395 1621 aaKnown RBP26.88■■□□□ 1.89
GRN-214ENST00000589265 SOGA1O94964 1423 aa26.86■■□□□ 1.89
GRN-214ENST00000589265 WDR97A6NE52 1622 aa26.85■■□□□ 1.89
GRN-214ENST00000589265 IFT140Q96RY7 1462 aa26.84■■□□□ 1.89
GRN-214ENST00000589265 ABCA10Q8WWZ4 1543 aa26.74■■□□□ 1.87
GRN-214ENST00000589265 ZNF608Q9ULD9 1512 aaPredicted RBP26.74■■□□□ 1.87
GRN-214ENST00000589265 EIF4G3O43432 1585 aaKnown RBP26.72■■□□□ 1.87
GRN-214ENST00000589265 ABCA5Q8WWZ7 1642 aa26.67■■□□□ 1.86
GRN-214ENST00000589265 TDRD9Q8NDG6 1382 aaKnown RBP26.66■■□□□ 1.86
GRN-214ENST00000589265 AQRO60306 1485 aaKnown RBP eCLIP26.63■■□□□ 1.852e-7■■■■■ 29.1
GRN-214ENST00000589265 PBRM1Q86U86 1689 aa26.63■■□□□ 1.85
GRN-214ENST00000589265 RUSC2Q8N2Y8 1516 aa26.58■■□□□ 1.85
GRN-214ENST00000589265 GAPVD1Q14C86 1478 aa26.58■■□□□ 1.85
GRN-214ENST00000589265 KIF27Q86VH2 1401 aa26.56■■□□□ 1.84
GRN-214ENST00000589265 GRIN2BQ13224 1484 aa26.48■■□□□ 1.83
GRN-214ENST00000589265 ERICH3Q5RHP9 1530 aa26.44■■□□□ 1.82
GRN-214ENST00000589265 FAM9AQ8IZU1 332 aaPredicted RBP26.44■■□□□ 1.82
GRN-214ENST00000589265 SNAPC4Q5SXM2 1469 aa26.42■■□□□ 1.82
GRN-214ENST00000589265 EEA1Q15075 1411 aa26.39■■□□□ 1.82
GRN-214ENST00000589265 CUL7Q14999 1698 aa26.37■■□□□ 1.81
GRN-214ENST00000589265 ADAMTS12P58397 1594 aa26.37■■□□□ 1.81
GRN-214ENST00000589265 IGF1RP08069 1367 aa26.36■■□□□ 1.81
GRN-214ENST00000589265 MAGI1Q96QZ7 1491 aaPredicted RBP26.36■■□□□ 1.81
GRN-214ENST00000589265 CHD1O14646 1710 aa26.33■■□□□ 1.81
GRN-214ENST00000589265 CSRNP3Q8WYN3 585 aa26.28■■□□□ 1.8
GRN-214ENST00000589265 FHAD1B1AJZ9 1412 aa26.26■■□□□ 1.79
GRN-214ENST00000589265 SYNJ2O15056 1496 aa26.25■■□□□ 1.79
GRN-214ENST00000589265 CARMIL1Q5VZK9 1371 aa26.24■■□□□ 1.79
GRN-214ENST00000589265 FBLN2P98095 1184 aa26.22■■□□□ 1.79
GRN-214ENST00000589265 PRXQ9BXM0 1461 aa26.19■■□□□ 1.78
GRN-214ENST00000589265 KIF21BO75037 1637 aa26.18■■□□□ 1.78
GRN-214ENST00000589265 CHMP7Q8WUX9 453 aaPredicted RBP26.17■■□□□ 1.78
GRN-214ENST00000589265 GRIN2AQ12879 1464 aa26.17■■□□□ 1.78
GRN-214ENST00000589265 RAPGEF2Q9Y4G8 1499 aa26.17■■□□□ 1.78
GRN-214ENST00000589265 EHMT2Q96KQ7 1210 aa26.13■■□□□ 1.77
GRN-214ENST00000589265 CEP170Q5SW79 1584 aa26.07■■□□□ 1.76
GRN-214ENST00000589265 CTTNBP2Q8WZ74 1663 aa26.05■■□□□ 1.76
GRN-214ENST00000589265 GOLGA3Q08378 1498 aa26.04■■□□□ 1.76
GRN-214ENST00000589265 NUP160Q12769 1436 aa25.99■■□□□ 1.75
GRN-214ENST00000589265 OSCARQ8IYS5 282 aa25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms