RNA–Protein interactions for RNA: ENST00000586242.1

GRN-204, Transcript of granulin precursor, humanhuman

TSL 3

Gene GRN, Length 665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-204ENST00000586242 NISCHQ9Y2I1 1504 aa36.4■■■■□ 3.42
GRN-204ENST00000586242 ABCC9O60706 1549 aa32.8■■■□□ 2.84
GRN-204ENST00000586242 CCDC180Q9P1Z9 1646 aa32.67■■■□□ 2.82
GRN-204ENST00000586242 RB1CC1Q8TDY2 1594 aa31.07■■■□□ 2.56
GRN-204ENST00000586242 DNAJC5BQ9UF47 199 aa30.86■■■□□ 2.53
GRN-204ENST00000586242 NACADO15069 1562 aa30.83■■■□□ 2.53
GRN-204ENST00000586242 DCAF8L2P0C7V8 631 aa30.7■■■□□ 2.51
GRN-204ENST00000586242 UNC13AQ9UPW8 1703 aa30.64■■■□□ 2.5
GRN-204ENST00000586242 PABPN1Q86U42 306 aaKnown RBP eCLIP30.52■■■□□ 2.48
GRN-204ENST00000586242 ZCCHC6Q5VYS8 1495 aaKnown RBP30.44■■■□□ 2.46
GRN-204ENST00000586242 BICRAQ9NZM4 1560 aa30.34■■■□□ 2.45
GRN-204ENST00000586242 MYO15BQ96JP2 1530 aa30.32■■■□□ 2.44
GRN-204ENST00000586242 DCAF1Q9Y4B6 1507 aa30.08■■■□□ 2.41
GRN-204ENST00000586242 SCRIBQ14160 1630 aa29.9■■■□□ 2.38
GRN-204ENST00000586242 SHROOM4Q9ULL8 1493 aa29.63■■■□□ 2.33
GRN-204ENST00000586242 CC2D2AQ9P2K1 1620 aa29.62■■■□□ 2.33
GRN-204ENST00000586242 EIF4G1Q04637 1599 aaKnown RBP29.52■■■□□ 2.32
GRN-204ENST00000586242 CECR2Q9BXF3 1484 aa29.48■■■□□ 2.31
GRN-204ENST00000586242 SMARCA4P51532 1647 aa28.46■■■□□ 2.15
GRN-204ENST00000586242 NCAPD3P42695 1498 aa28.46■■■□□ 2.15
GRN-204ENST00000586242 ATAD2BQ9ULI0 1458 aa28.44■■■□□ 2.14
GRN-204ENST00000586242 SMARCA2P51531 1590 aa28.28■■■□□ 2.12
GRN-204ENST00000586242 HMGXB3Q12766 1538 aa28.28■■■□□ 2.12
GRN-204ENST00000586242 NESP48681 1621 aa28.23■■■□□ 2.11
GRN-204ENST00000586242 ERCC6Q03468 1493 aa28.21■■■□□ 2.11
GRN-204ENST00000586242 BAZ1AQ9NRL2 1556 aaPredicted RBP28.2■■■□□ 2.11
GRN-204ENST00000586242 DNAJC5Q9H3Z4 198 aa28.16■■■□□ 2.1
GRN-204ENST00000586242 MROH2BQ7Z745 1585 aa28.15■■■□□ 2.1
GRN-204ENST00000586242 BAZ1BQ9UIG0 1483 aaKnown RBP28.14■■■□□ 2.09
GRN-204ENST00000586242 CUX2O14529 1486 aa28.12■■■□□ 2.09
GRN-204ENST00000586242 PEG3Q9GZU2 1588 aa28.11■■■□□ 2.09
GRN-204ENST00000586242 RSF1Q96T23 1441 aaPredicted RBP28■■■□□ 2.07
GRN-204ENST00000586242 SUPT5HO00267 1087 aaKnown RBP27.97■■■□□ 2.07
GRN-204ENST00000586242 THOC2Q8NI27 1593 aaKnown RBP27.92■■■□□ 2.06
GRN-204ENST00000586242 KIF21AQ7Z4S6 1674 aa27.88■■■□□ 2.05
GRN-204ENST00000586242 WIZO95785 1651 aa27.85■■■□□ 2.05
GRN-204ENST00000586242 LAMC3Q9Y6N6 1575 aa27.84■■■□□ 2.05
GRN-204ENST00000586242 PDS5BQ9NTI5 1447 aa27.6■■■□□ 2.01
GRN-204ENST00000586242 CADPSQ9ULU8 1353 aa27.6■■■□□ 2.01
GRN-204ENST00000586242 TOP2AP11388 1531 aaKnown RBP27.55■■■□□ 2
GRN-204ENST00000586242 MRC2Q9UBG0 1479 aa27.48■■□□□ 1.99
GRN-204ENST00000586242 WDR62O43379 1518 aa27.44■■□□□ 1.98
GRN-204ENST00000586242 CEP164Q9UPV0 1460 aa27.35■■□□□ 1.97
GRN-204ENST00000586242 FANCD2Q9BXW9 1451 aa27.34■■□□□ 1.97
GRN-204ENST00000586242 CFTRP13569 1480 aa27.31■■□□□ 1.96
GRN-204ENST00000586242 CCDC88BA6NC98 1476 aa27.25■■□□□ 1.95
GRN-204ENST00000586242 URB2Q14146 1524 aaKnown RBP27.21■■□□□ 1.95
GRN-204ENST00000586242 PRDM2Q13029 1718 aa27.15■■□□□ 1.94
GRN-204ENST00000586242 TRIM41Q8WV44 630 aa27■■□□□ 1.91
GRN-204ENST00000586242 ZNF608Q9ULD9 1512 aaPredicted RBP26.9■■□□□ 1.9
GRN-204ENST00000586242 TOPBP1Q92547 1522 aa26.85■■□□□ 1.89
GRN-204ENST00000586242 OSCARQ8IYS5 282 aa26.78■■□□□ 1.88
GRN-204ENST00000586242 IFT140Q96RY7 1462 aa26.77■■□□□ 1.88
GRN-204ENST00000586242 DNMBPQ6XZF7 1577 aa26.73■■□□□ 1.87
GRN-204ENST00000586242 EIF4G3O43432 1585 aaKnown RBP26.72■■□□□ 1.87
GRN-204ENST00000586242 RIMBP3CA6NJZ7 1639 aa26.66■■□□□ 1.86
GRN-204ENST00000586242 RIMBP3BA6NNM3 1639 aa26.66■■□□□ 1.86
GRN-204ENST00000586242 TARBP1Q13395 1621 aaKnown RBP26.66■■□□□ 1.86
GRN-204ENST00000586242 RIMBP3Q9UFD9 1639 aa26.66■■□□□ 1.86
GRN-204ENST00000586242 AQRO60306 1485 aaKnown RBP eCLIP26.6■■□□□ 1.85
GRN-204ENST00000586242 CHD1O14646 1710 aa26.59■■□□□ 1.85
GRN-204ENST00000586242 ABCC8Q09428 1581 aa26.59■■□□□ 1.85
GRN-204ENST00000586242 POLA1P09884 1462 aaPredicted RBP26.58■■□□□ 1.85
GRN-204ENST00000586242 RAD54L2Q9Y4B4 1467 aa26.55■■□□□ 1.84
GRN-204ENST00000586242 ARHGEF11O15085 1522 aa26.51■■□□□ 1.83
GRN-204ENST00000586242 CUX1P39880 1505 aa26.44■■□□□ 1.82
GRN-204ENST00000586242 FGD5Q6ZNL6 1462 aa26.42■■□□□ 1.82
GRN-204ENST00000586242 WRNQ14191 1432 aaPredicted RBP eCLIP26.41■■□□□ 1.82
GRN-204ENST00000586242 CHIC1Q5VXU3 224 aa26.41■■□□□ 1.82
GRN-204ENST00000586242 TDRD9Q8NDG6 1382 aaKnown RBP26.41■■□□□ 1.82
GRN-204ENST00000586242 SOGA1O94964 1423 aa26.39■■□□□ 1.81
GRN-204ENST00000586242 FBLN2P98095 1184 aa26.34■■□□□ 1.81
GRN-204ENST00000586242 SNAPC4Q5SXM2 1469 aa26.32■■□□□ 1.8
GRN-204ENST00000586242 WDR97A6NE52 1622 aa26.31■■□□□ 1.8
GRN-204ENST00000586242 ARAP1Q96P48 1450 aa26.3■■□□□ 1.8
GRN-204ENST00000586242 SYNJ1O43426 1573 aa26.29■■□□□ 1.8
GRN-204ENST00000586242 CYB5RLQ6IPT4 315 aa26.25■■□□□ 1.79
GRN-204ENST00000586242 TOP2BQ02880 1626 aa26.25■■□□□ 1.79
GRN-204ENST00000586242 BIVM-ERCC5R4GMW8 1640 aa26.23■■□□□ 1.79
GRN-204ENST00000586242 CLASP1Q7Z460 1538 aa26.21■■□□□ 1.79
GRN-204ENST00000586242 PBRM1Q86U86 1689 aa26.2■■□□□ 1.78
GRN-204ENST00000586242 GRIN2BQ13224 1484 aa26.15■■□□□ 1.78
GRN-204ENST00000586242 MAGI1Q96QZ7 1491 aaPredicted RBP26.15■■□□□ 1.78
GRN-204ENST00000586242 ABCA5Q8WWZ7 1642 aa26.11■■□□□ 1.77
GRN-204ENST00000586242 CHMP7Q8WUX9 453 aaPredicted RBP26.08■■□□□ 1.77
GRN-204ENST00000586242 SYNJ2O15056 1496 aa26.08■■□□□ 1.77
GRN-204ENST00000586242 GAPVD1Q14C86 1478 aa26.08■■□□□ 1.77
GRN-204ENST00000586242 ABCA10Q8WWZ4 1543 aa26.06■■□□□ 1.76
GRN-204ENST00000586242 TRHP20396 242 aaPredicted RBP25.94■■□□□ 1.74
GRN-204ENST00000586242 ERCC6L2Q5T890 1561 aa25.92■■□□□ 1.74
GRN-204ENST00000586242 ADAMTS12P58397 1594 aa25.91■■□□□ 1.74
GRN-204ENST00000586242 CEP170Q5SW79 1584 aa25.87■■□□□ 1.73
GRN-204ENST00000586242 GRIN2AQ12879 1464 aa25.86■■□□□ 1.73
GRN-204ENST00000586242 FAM9AQ8IZU1 332 aaPredicted RBP25.85■■□□□ 1.73
GRN-204ENST00000586242 KIF27Q86VH2 1401 aa25.82■■□□□ 1.72
GRN-204ENST00000586242 RUSC2Q8N2Y8 1516 aa25.8■■□□□ 1.72
GRN-204ENST00000586242 NUP160Q12769 1436 aa25.77■■□□□ 1.72
GRN-204ENST00000586242 EEA1Q15075 1411 aa25.74■■□□□ 1.71
GRN-204ENST00000586242 SHROOM2Q13796 1616 aa25.72■■□□□ 1.71
GRN-204ENST00000586242 FHAD1B1AJZ9 1412 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms