Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC25Q86WR0 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CCDC25Q86WR0 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.29■■□□□ 1
CCDC25Q86WR0 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.29■■□□□ 1
CCDC25Q86WR0 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.29■■□□□ 1
CCDC25Q86WR0 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC25Q86WR0 FP700111.2-201ENST00000619190 1892 ntBASIC21.28■■□□□ 1
CCDC25Q86WR0 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
CCDC25Q86WR0 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
CCDC25Q86WR0 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC25Q86WR0 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCDC25Q86WR0 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.28■■□□□ 1
CCDC25Q86WR0 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC25Q86WR0 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.28■■□□□ 1
CCDC25Q86WR0 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.28■■□□□ 1
CCDC25Q86WR0 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.28■■□□□ 1
CCDC25Q86WR0 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC25Q86WR0 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC25Q86WR0 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCDC25Q86WR0 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCDC25Q86WR0 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC25Q86WR0 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC25Q86WR0 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
CCDC25Q86WR0 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.28■■□□□ 1
CCDC25Q86WR0 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CCDC25Q86WR0 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC25Q86WR0 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.28■■□□□ 1
CCDC25Q86WR0 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.27■■□□□ 1
CCDC25Q86WR0 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC25Q86WR0 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
CCDC25Q86WR0 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCDC25Q86WR0 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
CCDC25Q86WR0 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCDC25Q86WR0 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC25Q86WR0 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.27■■□□□ 1
CCDC25Q86WR0 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC25Q86WR0 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CCDC25Q86WR0 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.27■■□□□ 1
CCDC25Q86WR0 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.27■■□□□ 1
CCDC25Q86WR0 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.27■■□□□ 1
CCDC25Q86WR0 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CCDC25Q86WR0 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.27■■□□□ 1
CCDC25Q86WR0 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CCDC25Q86WR0 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CCDC25Q86WR0 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
CCDC25Q86WR0 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CCDC25Q86WR0 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CCDC25Q86WR0 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC25Q86WR0 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC25Q86WR0 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC25Q86WR0 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CCDC25Q86WR0 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CCDC25Q86WR0 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC25Q86WR0 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CCDC25Q86WR0 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.26■□□□□ 0.99
CCDC25Q86WR0 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.26■□□□□ 0.99
CCDC25Q86WR0 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CCDC25Q86WR0 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC25Q86WR0 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.26■□□□□ 0.99
CCDC25Q86WR0 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.26■□□□□ 0.99
CCDC25Q86WR0 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC25Q86WR0 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CCDC25Q86WR0 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.26■□□□□ 0.99
CCDC25Q86WR0 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC25Q86WR0 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC25Q86WR0 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC25Q86WR0 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC25Q86WR0 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC25Q86WR0 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC25Q86WR0 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
CCDC25Q86WR0 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
CCDC25Q86WR0 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.25■□□□□ 0.99
CCDC25Q86WR0 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC25Q86WR0 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.25■□□□□ 0.99
CCDC25Q86WR0 AL356441.2-201ENST00000443009 864 ntBASIC21.25■□□□□ 0.99
CCDC25Q86WR0 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.25■□□□□ 0.99
CCDC25Q86WR0 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC25Q86WR0 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CCDC25Q86WR0 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
CCDC25Q86WR0 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC25Q86WR0 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC25Q86WR0 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC25Q86WR0 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC25Q86WR0 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.24■□□□□ 0.99
CCDC25Q86WR0 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC25Q86WR0 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CCDC25Q86WR0 AC138932.1-201ENST00000534164 6830 ntBASIC21.24■□□□□ 0.99
CCDC25Q86WR0 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC25Q86WR0 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC25Q86WR0 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CCDC25Q86WR0 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CCDC25Q86WR0 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC25Q86WR0 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.24■□□□□ 0.99
CCDC25Q86WR0 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
CCDC25Q86WR0 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.24■□□□□ 0.99
CCDC25Q86WR0 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.24■□□□□ 0.99
CCDC25Q86WR0 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC25Q86WR0 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC25Q86WR0 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC25Q86WR0 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms