RNA–Protein interactions for RNA: ENST00000554252.1

AL390816.2-201, humanhuman

TSL 3 BASIC

Gene AL390816.2, Length 737 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL390816.2-201ENST00000554252 NISCHQ9Y2I1 1504 aa50.22■■■■■ 5.63
AL390816.2-201ENST00000554252 CCDC180Q9P1Z9 1646 aa44.83■■■■■ 4.77
AL390816.2-201ENST00000554252 ABCC9O60706 1549 aa44.7■■■■■ 4.75
AL390816.2-201ENST00000554252 RB1CC1Q8TDY2 1594 aa42.56■■■■■ 4.4
AL390816.2-201ENST00000554252 DCAF8L2P0C7V8 631 aa42.48■■■■■ 4.39
AL390816.2-201ENST00000554252 NACADO15069 1562 aa42.3■■■■■ 4.36
AL390816.2-201ENST00000554252 ZCCHC6Q5VYS8 1495 aaKnown RBP41.91■■■■■ 4.3
AL390816.2-201ENST00000554252 PABPN1Q86U42 306 aaKnown RBP eCLIP41.72■■■■■ 4.27
AL390816.2-201ENST00000554252 MYO15BQ96JP2 1530 aa41.71■■■■■ 4.27
AL390816.2-201ENST00000554252 UNC13AQ9UPW8 1703 aa41.64■■■■■ 4.26
AL390816.2-201ENST00000554252 DNAJC5BQ9UF47 199 aa41.59■■■■■ 4.25
AL390816.2-201ENST00000554252 DCAF1Q9Y4B6 1507 aa41.49■■■■■ 4.23
AL390816.2-201ENST00000554252 BICRAQ9NZM4 1560 aa41.31■■■■■ 4.2
AL390816.2-201ENST00000554252 SCRIBQ14160 1630 aa41.07■■■■■ 4.16
AL390816.2-201ENST00000554252 SHROOM4Q9ULL8 1493 aa40.63■■■■■ 4.09
AL390816.2-201ENST00000554252 CC2D2AQ9P2K1 1620 aa40.31■■■■■ 4.04
AL390816.2-201ENST00000554252 EIF4G1Q04637 1599 aaKnown RBP40.28■■■■■ 4.04
AL390816.2-201ENST00000554252 CECR2Q9BXF3 1484 aa40.16■■■■■ 4.02
AL390816.2-201ENST00000554252 SMARCA4P51532 1647 aa39.11■■■■□ 3.85
AL390816.2-201ENST00000554252 NCAPD3P42695 1498 aa39.04■■■■□ 3.84
AL390816.2-201ENST00000554252 ATAD2BQ9ULI0 1458 aa39.04■■■■□ 3.84
AL390816.2-201ENST00000554252 BAZ1AQ9NRL2 1556 aaPredicted RBP38.93■■■■□ 3.82
AL390816.2-201ENST00000554252 SMARCA2P51531 1590 aa38.91■■■■□ 3.82
AL390816.2-201ENST00000554252 HMGXB3Q12766 1538 aa38.79■■■■□ 3.8
AL390816.2-201ENST00000554252 MROH2BQ7Z745 1585 aa38.74■■■■□ 3.79
AL390816.2-201ENST00000554252 BAZ1BQ9UIG0 1483 aaKnown RBP38.73■■■■□ 3.79
AL390816.2-201ENST00000554252 PEG3Q9GZU2 1588 aa38.61■■■■□ 3.77
AL390816.2-201ENST00000554252 RSF1Q96T23 1441 aaPredicted RBP38.56■■■■□ 3.76
AL390816.2-201ENST00000554252 ERCC6Q03468 1493 aa38.55■■■■□ 3.76
AL390816.2-201ENST00000554252 NESP48681 1621 aa38.49■■■■□ 3.75
AL390816.2-201ENST00000554252 WIZO95785 1651 aa38.33■■■■□ 3.73
AL390816.2-201ENST00000554252 SUPT5HO00267 1087 aaKnown RBP38.32■■■■□ 3.72
AL390816.2-201ENST00000554252 CUX2O14529 1486 aa38.22■■■■□ 3.71
AL390816.2-201ENST00000554252 LAMC3Q9Y6N6 1575 aa38.14■■■■□ 3.7
AL390816.2-201ENST00000554252 KIF21AQ7Z4S6 1674 aa37.97■■■■□ 3.67
AL390816.2-201ENST00000554252 TOP2AP11388 1531 aaKnown RBP37.93■■■■□ 3.66
AL390816.2-201ENST00000554252 PDS5BQ9NTI5 1447 aa37.93■■■■□ 3.66
AL390816.2-201ENST00000554252 THOC2Q8NI27 1593 aaKnown RBP37.93■■■■□ 3.66
AL390816.2-201ENST00000554252 CADPSQ9ULU8 1353 aa37.93■■■■□ 3.66
AL390816.2-201ENST00000554252 DNAJC5Q9H3Z4 198 aa37.84■■■■□ 3.65
AL390816.2-201ENST00000554252 MRC2Q9UBG0 1479 aa37.61■■■■□ 3.61
AL390816.2-201ENST00000554252 CCDC88BA6NC98 1476 aa37.58■■■■□ 3.61
AL390816.2-201ENST00000554252 CEP164Q9UPV0 1460 aa37.55■■■■□ 3.6
AL390816.2-201ENST00000554252 FANCD2Q9BXW9 1451 aa37.54■■■■□ 3.6
AL390816.2-201ENST00000554252 CFTRP13569 1480 aa37.53■■■■□ 3.6
AL390816.2-201ENST00000554252 WDR62O43379 1518 aa37.46■■■■□ 3.59
AL390816.2-201ENST00000554252 URB2Q14146 1524 aaKnown RBP37.21■■■■□ 3.55
AL390816.2-201ENST00000554252 PRDM2Q13029 1718 aa37.2■■■■□ 3.55
AL390816.2-201ENST00000554252 TOPBP1Q92547 1522 aa36.86■■■■□ 3.49
AL390816.2-201ENST00000554252 IFT140Q96RY7 1462 aa36.75■■■■□ 3.47
AL390816.2-201ENST00000554252 ZNF608Q9ULD9 1512 aaPredicted RBP36.74■■■■□ 3.47
AL390816.2-201ENST00000554252 DNMBPQ6XZF7 1577 aa36.74■■■■□ 3.47
AL390816.2-201ENST00000554252 ABCC8Q09428 1581 aa36.7■■■■□ 3.47
AL390816.2-201ENST00000554252 OSCARQ8IYS5 282 aa36.6■■■■□ 3.45
AL390816.2-201ENST00000554252 TRIM41Q8WV44 630 aa36.55■■■■□ 3.44
AL390816.2-201ENST00000554252 EIF4G3O43432 1585 aaKnown RBP36.53■■■■□ 3.44
AL390816.2-201ENST00000554252 POLA1P09884 1462 aaPredicted RBP36.51■■■■□ 3.44
AL390816.2-201ENST00000554252 TARBP1Q13395 1621 aaKnown RBP36.48■■■■□ 3.43
AL390816.2-201ENST00000554252 AQRO60306 1485 aaKnown RBP eCLIP36.46■■■■□ 3.43
AL390816.2-201ENST00000554252 RAD54L2Q9Y4B4 1467 aa36.44■■■■□ 3.42
AL390816.2-201ENST00000554252 SOGA1O94964 1423 aa36.37■■■■□ 3.41
AL390816.2-201ENST00000554252 WRNQ14191 1432 aaPredicted RBP eCLIP36.37■■■■□ 3.41
AL390816.2-201ENST00000554252 CUX1P39880 1505 aa36.37■■■■□ 3.41
AL390816.2-201ENST00000554252 FGD5Q6ZNL6 1462 aa36.37■■■■□ 3.41
AL390816.2-201ENST00000554252 TDRD9Q8NDG6 1382 aaKnown RBP36.3■■■■□ 3.4
AL390816.2-201ENST00000554252 FBLN2P98095 1184 aa36.25■■■■□ 3.39
AL390816.2-201ENST00000554252 CHD1O14646 1710 aa36.21■■■■□ 3.39
AL390816.2-201ENST00000554252 RIMBP3CA6NJZ7 1639 aa36.12■■■■□ 3.37
AL390816.2-201ENST00000554252 RIMBP3BA6NNM3 1639 aa36.12■■■■□ 3.37
AL390816.2-201ENST00000554252 RIMBP3Q9UFD9 1639 aa36.12■■■■□ 3.37
AL390816.2-201ENST00000554252 SYNJ1O43426 1573 aa36.11■■■■□ 3.37
AL390816.2-201ENST00000554252 SNAPC4Q5SXM2 1469 aa36.09■■■■□ 3.37
AL390816.2-201ENST00000554252 TOP2BQ02880 1626 aa36.08■■■■□ 3.37
AL390816.2-201ENST00000554252 CHIC1Q5VXU3 224 aa36.03■■■■□ 3.36
AL390816.2-201ENST00000554252 WDR97A6NE52 1622 aa36.02■■■■□ 3.36
AL390816.2-201ENST00000554252 ARHGEF11O15085 1522 aa36.02■■■■□ 3.36
AL390816.2-201ENST00000554252 BIVM-ERCC5R4GMW8 1640 aa36.01■■■■□ 3.35
AL390816.2-201ENST00000554252 GRIN2BQ13224 1484 aa35.98■■■■□ 3.35
AL390816.2-201ENST00000554252 CHMP7Q8WUX9 453 aaPredicted RBP35.95■■■■□ 3.35
AL390816.2-201ENST00000554252 GAPVD1Q14C86 1478 aa35.92■■■■□ 3.34
AL390816.2-201ENST00000554252 MAGI1Q96QZ7 1491 aaPredicted RBP35.91■■■■□ 3.34
AL390816.2-201ENST00000554252 PBRM1Q86U86 1689 aa35.91■■■■□ 3.34
AL390816.2-201ENST00000554252 ABCA10Q8WWZ4 1543 aa35.89■■■■□ 3.34
AL390816.2-201ENST00000554252 ABCA5Q8WWZ7 1642 aa35.83■■■■□ 3.33
AL390816.2-201ENST00000554252 CYB5RLQ6IPT4 315 aa35.82■■■■□ 3.32
AL390816.2-201ENST00000554252 SYNJ2O15056 1496 aa35.81■■■■□ 3.32
AL390816.2-201ENST00000554252 CLASP1Q7Z460 1538 aa35.73■■■■□ 3.31
AL390816.2-201ENST00000554252 ARAP1Q96P48 1450 aa35.7■■■■□ 3.31
AL390816.2-201ENST00000554252 KIF27Q86VH2 1401 aa35.59■■■■□ 3.29
AL390816.2-201ENST00000554252 ADAMTS12P58397 1594 aa35.56■■■■□ 3.28
AL390816.2-201ENST00000554252 GRIN2AQ12879 1464 aa35.53■■■■□ 3.28
AL390816.2-201ENST00000554252 FHAD1B1AJZ9 1412 aa35.45■■■■□ 3.27
AL390816.2-201ENST00000554252 ERICH3Q5RHP9 1530 aa35.43■■■■□ 3.26
AL390816.2-201ENST00000554252 FAM9AQ8IZU1 332 aaPredicted RBP35.43■■■■□ 3.26
AL390816.2-201ENST00000554252 CEP170Q5SW79 1584 aa35.42■■■■□ 3.26
AL390816.2-201ENST00000554252 RUSC2Q8N2Y8 1516 aa35.42■■■■□ 3.26
AL390816.2-201ENST00000554252 IGF1RP08069 1367 aa35.39■■■■□ 3.26
AL390816.2-201ENST00000554252 TRHP20396 242 aaPredicted RBP35.38■■■■□ 3.25
AL390816.2-201ENST00000554252 NUP160Q12769 1436 aa35.34■■■■□ 3.25
AL390816.2-201ENST00000554252 ERCC6L2Q5T890 1561 aa35.31■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms