RNA–Protein interactions for RNA: ENST00000318066.6

UBE2N-201, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2N, Length 5,186 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-201ENST00000318066 DCAF8L2P0C7V8 631 aa31.82■■■□□ 2.68
UBE2N-201ENST00000318066 SUPT5HO00267 1087 aaKnown RBP30.6■■■□□ 2.49
UBE2N-201ENST00000318066 NISCHQ9Y2I1 1504 aa30.56■■■□□ 2.48
UBE2N-201ENST00000318066 PELP1Q8IZL8 1130 aaKnown RBP30.55■■■□□ 2.48
UBE2N-201ENST00000318066 SHROOM4Q9ULL8 1493 aa29.69■■■□□ 2.34
UBE2N-201ENST00000318066 APLP2Q06481 763 aa29.69■■■□□ 2.34
UBE2N-201ENST00000318066 ZEB1P37275 1124 aaPredicted RBP29.29■■■□□ 2.28
UBE2N-201ENST00000318066 MYT1Q01538 1121 aa29.28■■■□□ 2.28
UBE2N-201ENST00000318066 EHMT2Q96KQ7 1210 aa29.25■■■□□ 2.27
UBE2N-201ENST00000318066 CENPBP07199 599 aaPredicted RBP29.23■■■□□ 2.27
UBE2N-201ENST00000318066 FAM9AQ8IZU1 332 aaPredicted RBP29.2■■■□□ 2.27
UBE2N-201ENST00000318066 CCER1Q8TC90 406 aaPredicted RBP29.13■■■□□ 2.25
UBE2N-201ENST00000318066 PCGF6Q9BYE7 350 aa28.99■■■□□ 2.23
UBE2N-201ENST00000318066 ERICH6Q7L0X2 663 aa28.94■■■□□ 2.22
UBE2N-201ENST00000318066 TRIM41Q8WV44 630 aa28.57■■■□□ 2.16
UBE2N-201ENST00000318066 NEFLP07196 543 aa28.51■■■□□ 2.15
UBE2N-201ENST00000318066 TTBK1Q5TCY1 1321 aaPredicted RBP28.43■■■□□ 2.14
UBE2N-201ENST00000318066 UBTFP17480 764 aaKnown RBP28.21■■■□□ 2.11
UBE2N-201ENST00000318066 RANGAP1P46060 587 aaPredicted RBP28.05■■■□□ 2.08
UBE2N-201ENST00000318066 ATP1B4Q9UN42 357 aaPredicted RBP28.05■■■□□ 2.08
UBE2N-201ENST00000318066 TRIM26Q12899 539 aaPredicted RBP28.03■■■□□ 2.08
UBE2N-201ENST00000318066 YTHDC1Q96MU7 727 aaKnown RBP27.89■■■□□ 2.06
UBE2N-201ENST00000318066 HRCP23327 699 aa27.81■■■□□ 2.04
UBE2N-201ENST00000318066 DAXXQ9UER7 740 aaPredicted RBP27.7■■■□□ 2.02
UBE2N-201ENST00000318066 PPARGC1BQ86YN6 1023 aaKnown RBP27.34■■□□□ 1.97
UBE2N-201ENST00000318066 CHIC1Q5VXU3 224 aa27.28■■□□□ 1.96
UBE2N-201ENST00000318066 RTL5Q5HYW3 569 aaPredicted RBP27.16■■□□□ 1.94
UBE2N-201ENST00000318066 ITGAEP38570 1179 aa27.15■■□□□ 1.94
UBE2N-201ENST00000318066 HNRNPUL2Q1KMD3 747 aaKnown RBP27.12■■□□□ 1.93
UBE2N-201ENST00000318066 POLR3GLQ9BT43 218 aa27.1■■□□□ 1.93
UBE2N-201ENST00000318066 DIEXFQ68CQ4 756 aaKnown RBP27.08■■□□□ 1.93
UBE2N-201ENST00000318066 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.07■■□□□ 1.92
UBE2N-201ENST00000318066 LOC105371045A0A1W2PR82 267 aa27.04■■□□□ 1.92
UBE2N-201ENST00000318066 MYT1LQ9UL68 1186 aa26.99■■□□□ 1.91
UBE2N-201ENST00000318066 ZNF316A6NFI3 1004 aaPredicted RBP26.98■■□□□ 1.91
UBE2N-201ENST00000318066 CLSPNQ9HAW4 1339 aa26.85■■□□□ 1.89
UBE2N-201ENST00000318066 ANP32CO43423 234 aa26.63■■□□□ 1.85
UBE2N-201ENST00000318066 CDK11AQ9UQ88 783 aaPredicted RBP26.62■■□□□ 1.85
UBE2N-201ENST00000318066 FAM50AQ14320 339 aaKnown RBP26.59■■□□□ 1.85
UBE2N-201ENST00000318066 CNGB1Q14028 1251 aaPredicted RBP26.59■■□□□ 1.85
UBE2N-201ENST00000318066 SLC4A1APQ9BWU0 796 aaKnown RBP26.57■■□□□ 1.84
UBE2N-201ENST00000318066 GTF3C3Q9Y5Q9 886 aa26.53■■□□□ 1.84
UBE2N-201ENST00000318066 TRIM52Q96A61 297 aa26.52■■□□□ 1.84
UBE2N-201ENST00000318066 ZBTB47Q9UFB7 747 aaPredicted RBP26.44■■□□□ 1.82
UBE2N-201ENST00000318066 NEUROD1Q13562 356 aa26.38■■□□□ 1.81
UBE2N-201ENST00000318066 ACIN1Q9UKV3 1341 aaKnown RBP26.29■■□□□ 1.8
UBE2N-201ENST00000318066 BCANQ96GW7 911 aa26.27■■□□□ 1.8
UBE2N-201ENST00000318066 ANP32AP39687 249 aaKnown RBP26.23■■□□□ 1.79
UBE2N-201ENST00000318066 ABCC9O60706 1549 aa26.2■■□□□ 1.78
UBE2N-201ENST00000318066 NEFMP07197 916 aa26.16■■□□□ 1.78
UBE2N-201ENST00000318066 CANXP27824 592 aaKnown RBP26.14■■□□□ 1.77
UBE2N-201ENST00000318066 ZNF326Q5BKZ1 582 aaKnown RBP26.09■■□□□ 1.77
UBE2N-201ENST00000318066 CSRNP3Q8WYN3 585 aa26.04■■□□□ 1.76
UBE2N-201ENST00000318066 PABPN1Q86U42 306 aaKnown RBP eCLIP26.01■■□□□ 1.76
UBE2N-201ENST00000318066 ANP32BQ92688 251 aaKnown RBP25.94■■□□□ 1.74
UBE2N-201ENST00000318066 DCAF1Q9Y4B6 1507 aa25.85■■□□□ 1.73
UBE2N-201ENST00000318066 UPF2Q9HAU5 1272 aaKnown RBP25.83■■□□□ 1.72
UBE2N-201ENST00000318066 TONSLQ96HA7 1378 aa25.81■■□□□ 1.72
UBE2N-201ENST00000318066 FKBP8Q14318 412 aa25.74■■□□□ 1.71
UBE2N-201ENST00000318066 GLIPR1L2Q4G1C9 344 aa25.73■■□□□ 1.71
UBE2N-201ENST00000318066 NPM2Q86SE8 214 aaKnown RBP25.68■■□□□ 1.7
UBE2N-201ENST00000318066 HSP90AA1P07900 732 aaKnown RBP25.67■■□□□ 1.7
UBE2N-201ENST00000318066 SCAF1Q9H7N4 1312 aaKnown RBP25.66■■□□□ 1.7
UBE2N-201ENST00000318066 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.66■■□□□ 1.7
UBE2N-201ENST00000318066 HNRNPUQ00839 825 aaKnown RBP eCLIP25.65■■□□□ 1.7
UBE2N-201ENST00000318066 FBLN2P98095 1184 aa25.62■■□□□ 1.69
UBE2N-201ENST00000318066 SLC24A1O60721 1099 aa25.62■■□□□ 1.69
UBE2N-201ENST00000318066 P3H3Q8IVL6 736 aa25.55■■□□□ 1.68
UBE2N-201ENST00000318066 EIF5BO60841 1220 aaKnown RBP25.54■■□□□ 1.68
UBE2N-201ENST00000318066 CCDC136Q96JN2 1154 aa25.53■■□□□ 1.68
UBE2N-201ENST00000318066 ZNF777Q9ULD5 760 aaPredicted RBP25.51■■□□□ 1.68
UBE2N-201ENST00000318066 DDX10Q13206 875 aaKnown RBP25.49■■□□□ 1.67
UBE2N-201ENST00000318066 BCL11AQ9H165 835 aa25.48■■□□□ 1.67
UBE2N-201ENST00000318066 TMC1Q8TDI8 760 aa25.47■■□□□ 1.67
UBE2N-201ENST00000318066 FAM9BQ8IZU0 186 aa25.45■■□□□ 1.66
UBE2N-201ENST00000318066 ANP32EQ9BTT0 268 aa25.39■■□□□ 1.65
UBE2N-201ENST00000318066 ESF1Q9H501 851 aaKnown RBP25.36■■□□□ 1.65
UBE2N-201ENST00000318066 WDR43Q15061 677 aaKnown RBP eCLIP25.35■■□□□ 1.65
UBE2N-201ENST00000318066 MRS2Q9HD23 443 aa25.33■■□□□ 1.65
UBE2N-201ENST00000318066 ZCCHC6Q5VYS8 1495 aaKnown RBP25.32■■□□□ 1.64
UBE2N-201ENST00000318066 DDRGK1Q96HY6 314 aa25.31■■□□□ 1.64
UBE2N-201ENST00000318066 ARID3CA6NKF2 412 aa25.3■■□□□ 1.64
UBE2N-201ENST00000318066 STAG3Q9UJ98 1225 aa25.25■■□□□ 1.63
UBE2N-201ENST00000318066 TSPY4P0CV99 314 aa25.23■■□□□ 1.63
UBE2N-201ENST00000318066 TSPY10P0CW01 314 aa25.23■■□□□ 1.63
UBE2N-201ENST00000318066 BECN1Q14457 450 aa25.23■■□□□ 1.63
UBE2N-201ENST00000318066 EIF4G2P78344 907 aaKnown RBP eCLIP25.21■■□□□ 1.63
UBE2N-201ENST00000318066 CHGAP10645 457 aaKnown RBP25.21■■□□□ 1.63
UBE2N-201ENST00000318066 EEA1Q15075 1411 aa25.21■■□□□ 1.63
UBE2N-201ENST00000318066 MYH16Q9H6N6 1097 aa25.2■■□□□ 1.62
UBE2N-201ENST00000318066 SCRIBQ14160 1630 aa25.18■■□□□ 1.62
UBE2N-201ENST00000318066 MTUS2Q5JR59 1369 aa25.17■■□□□ 1.62
UBE2N-201ENST00000318066 NBR1Q14596 966 aa25.16■■□□□ 1.62
UBE2N-201ENST00000318066 NPM1P06748 294 aaKnown RBP eCLIP25.16■■□□□ 1.62
UBE2N-201ENST00000318066 MIER1Q8N108 512 aa25.13■■□□□ 1.61
UBE2N-201ENST00000318066 CLIP1P30622 1438 aa25.11■■□□□ 1.61
UBE2N-201ENST00000318066 SALL2Q9Y467 1007 aaPredicted RBP25.11■■□□□ 1.61
UBE2N-201ENST00000318066 GOLGA6L22H0YM25 854 aa25.1■■□□□ 1.61
UBE2N-201ENST00000318066 RSF1Q96T23 1441 aaPredicted RBP25.06■■□□□ 1.6
UBE2N-201ENST00000318066 NCLP19338 710 aaKnown RBP25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms