RNA–Protein interactions for RNA: ENST00000366663.9

C1orf198-201, Transcript of chromosome 1 open reading frame 198, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C1orf198, Length 3,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf198-201ENST00000366663 NISCHQ9Y2I1 1504 aa34.21■■■■□ 3.07
C1orf198-201ENST00000366663 SUPT5HO00267 1087 aaKnown RBP31.78■■■□□ 2.68
C1orf198-201ENST00000366663 PCGF6Q9BYE7 350 aa31.76■■■□□ 2.68
C1orf198-201ENST00000366663 PPARGC1BQ86YN6 1023 aaKnown RBP31.52■■■□□ 2.64
C1orf198-201ENST00000366663 HRCP23327 699 aa31.33■■■□□ 2.61
C1orf198-201ENST00000366663 SHROOM4Q9ULL8 1493 aa31.28■■■□□ 2.6
C1orf198-201ENST00000366663 PELP1Q8IZL8 1130 aaKnown RBP31.22■■■□□ 2.59
C1orf198-201ENST00000366663 EHMT2Q96KQ7 1210 aa30.68■■■□□ 2.5
C1orf198-201ENST00000366663 DCAF8L2P0C7V8 631 aa30.67■■■□□ 2.5
C1orf198-201ENST00000366663 MYT1Q01538 1121 aa30.15■■■□□ 2.42
C1orf198-201ENST00000366663 LOC105371045A0A1W2PR82 267 aa30■■■□□ 2.39
C1orf198-201ENST00000366663 SCAF1Q9H7N4 1312 aaKnown RBP29.99■■■□□ 2.39
C1orf198-201ENST00000366663 YTHDC1Q96MU7 727 aaKnown RBP29.97■■■□□ 2.39
C1orf198-201ENST00000366663 FAM9AQ8IZU1 332 aaPredicted RBP29.87■■■□□ 2.37
C1orf198-201ENST00000366663 CENPBP07199 599 aaPredicted RBP29.86■■■□□ 2.37
C1orf198-201ENST00000366663 TTBK1Q5TCY1 1321 aaPredicted RBP29.85■■■□□ 2.37
C1orf198-201ENST00000366663 GTF3C3Q9Y5Q9 886 aa29.73■■■□□ 2.35
C1orf198-201ENST00000366663 CHIC1Q5VXU3 224 aa29.72■■■□□ 2.35
C1orf198-201ENST00000366663 TRIM26Q12899 539 aaPredicted RBP29.71■■■□□ 2.35
C1orf198-201ENST00000366663 ZEB1P37275 1124 aaPredicted RBP29.7■■■□□ 2.35
C1orf198-201ENST00000366663 CCER1Q8TC90 406 aaPredicted RBP29.56■■■□□ 2.32
C1orf198-201ENST00000366663 NEUROD1Q13562 356 aa29.35■■■□□ 2.29
C1orf198-201ENST00000366663 ACIN1Q9UKV3 1341 aaKnown RBP29.34■■■□□ 2.29
C1orf198-201ENST00000366663 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.22■■■□□ 2.27
C1orf198-201ENST00000366663 DIEXFQ68CQ4 756 aaKnown RBP29.13■■■□□ 2.25
C1orf198-201ENST00000366663 MYO15BQ96JP2 1530 aa28.99■■■□□ 2.23
C1orf198-201ENST00000366663 TRIM41Q8WV44 630 aa28.82■■■□□ 2.2
C1orf198-201ENST00000366663 ZCCHC6Q5VYS8 1495 aaKnown RBP28.73■■■□□ 2.19
C1orf198-201ENST00000366663 CCDC180Q9P1Z9 1646 aa28.64■■■□□ 2.17
C1orf198-201ENST00000366663 ERICH6Q7L0X2 663 aa28.58■■■□□ 2.17
C1orf198-201ENST00000366663 BCANQ96GW7 911 aa28.55■■■□□ 2.16
C1orf198-201ENST00000366663 BCL11AQ9H165 835 aa28.37■■■□□ 2.13
C1orf198-201ENST00000366663 RANGAP1P46060 587 aaPredicted RBP28.31■■■□□ 2.12
C1orf198-201ENST00000366663 DCAF1Q9Y4B6 1507 aa28.23■■■□□ 2.11
C1orf198-201ENST00000366663 HNRNPUL2Q1KMD3 747 aaKnown RBP28.21■■■□□ 2.11
C1orf198-201ENST00000366663 ZNF316A6NFI3 1004 aaPredicted RBP28.12■■■□□ 2.09
C1orf198-201ENST00000366663 MIER1Q8N108 512 aa28.09■■■□□ 2.09
C1orf198-201ENST00000366663 NEFLP07196 543 aa28.07■■■□□ 2.08
C1orf198-201ENST00000366663 ANP32EQ9BTT0 268 aa27.97■■■□□ 2.07
C1orf198-201ENST00000366663 ABCC9O60706 1549 aa27.96■■■□□ 2.07
C1orf198-201ENST00000366663 APLP2Q06481 763 aa27.94■■■□□ 2.06
C1orf198-201ENST00000366663 UBTFP17480 764 aaKnown RBP27.91■■■□□ 2.06
C1orf198-201ENST00000366663 CSRNP3Q8WYN3 585 aa27.84■■■□□ 2.05
C1orf198-201ENST00000366663 ITGAEP38570 1179 aa27.68■■■□□ 2.02
C1orf198-201ENST00000366663 FKBP8Q14318 412 aa27.66■■■□□ 2.02
C1orf198-201ENST00000366663 SCRIBQ14160 1630 aa27.66■■■□□ 2.02
C1orf198-201ENST00000366663 SUPT16HQ9Y5B9 1047 aaKnown RBP27.57■■■□□ 2
C1orf198-201ENST00000366663 TSHZ2Q9NRE2 1034 aa27.46■■□□□ 1.99
C1orf198-201ENST00000366663 NBR1Q14596 966 aa27.38■■□□□ 1.97
C1orf198-201ENST00000366663 CNGB1Q14028 1251 aaPredicted RBP27.36■■□□□ 1.97
C1orf198-201ENST00000366663 TRIM52Q96A61 297 aa27.27■■□□□ 1.96
C1orf198-201ENST00000366663 IRX6P78412 446 aaPredicted RBP27.26■■□□□ 1.96
C1orf198-201ENST00000366663 EIF5BO60841 1220 aaKnown RBP27.24■■□□□ 1.95
C1orf198-201ENST00000366663 RTL5Q5HYW3 569 aaPredicted RBP27.23■■□□□ 1.95
C1orf198-201ENST00000366663 RTN4Q9NQC3 1192 aaKnown RBP27.21■■□□□ 1.95
C1orf198-201ENST00000366663 RSF1Q96T23 1441 aaPredicted RBP27.2■■□□□ 1.94
C1orf198-201ENST00000366663 CDK11AQ9UQ88 783 aaPredicted RBP27.2■■□□□ 1.94
C1orf198-201ENST00000366663 PRKCSHP14314 528 aaPredicted RBP27.16■■□□□ 1.94
C1orf198-201ENST00000366663 RBM19Q9Y4C8 960 aaKnown RBP27.12■■□□□ 1.93
C1orf198-201ENST00000366663 PABPN1Q86U42 306 aaKnown RBP eCLIP27.1■■□□□ 1.93
C1orf198-201ENST00000366663 CECR2Q9BXF3 1484 aa27.06■■□□□ 1.92
C1orf198-201ENST00000366663 DDX10Q13206 875 aaKnown RBP27.03■■□□□ 1.92
C1orf198-201ENST00000366663 CCDC136Q96JN2 1154 aa26.99■■□□□ 1.91
C1orf198-201ENST00000366663 ATP1B4Q9UN42 357 aaPredicted RBP26.99■■□□□ 1.91
C1orf198-201ENST00000366663 HIRIP3Q9BW71 556 aaPredicted RBP26.99■■□□□ 1.91
C1orf198-201ENST00000366663 CLSPNQ9HAW4 1339 aa26.94■■□□□ 1.9
C1orf198-201ENST00000366663 DEKP35659 375 aaKnown RBP26.9■■□□□ 1.9
C1orf198-201ENST00000366663 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.9■■□□□ 1.9
C1orf198-201ENST00000366663 KCNH8Q96L42 1107 aa26.89■■□□□ 1.89
C1orf198-201ENST00000366663 NACADO15069 1562 aa26.87■■□□□ 1.89
C1orf198-201ENST00000366663 NPM2Q86SE8 214 aaKnown RBP26.84■■□□□ 1.89
C1orf198-201ENST00000366663 RB1CC1Q8TDY2 1594 aa26.82■■□□□ 1.88
C1orf198-201ENST00000366663 ANO8Q9HCE9 1232 aaPredicted RBP26.79■■□□□ 1.88
C1orf198-201ENST00000366663 ANP32CO43423 234 aa26.78■■□□□ 1.88
C1orf198-201ENST00000366663 MROH2BQ7Z745 1585 aa26.77■■□□□ 1.88
C1orf198-201ENST00000366663 POLR3GLQ9BT43 218 aa26.76■■□□□ 1.87
C1orf198-201ENST00000366663 HNRNPUQ00839 825 aaKnown RBP eCLIP26.73■■□□□ 1.87
C1orf198-201ENST00000366663 SENP3-EIF4A1A0A087X0R7 540 aa26.65■■□□□ 1.86
C1orf198-201ENST00000366663 DAXXQ9UER7 740 aaPredicted RBP26.59■■□□□ 1.85
C1orf198-201ENST00000366663 WIZO95785 1651 aa26.57■■□□□ 1.84
C1orf198-201ENST00000366663 ANP32AP39687 249 aaKnown RBP26.57■■□□□ 1.84
C1orf198-201ENST00000366663 ZBTB47Q9UFB7 747 aaPredicted RBP26.46■■□□□ 1.83
C1orf198-201ENST00000366663 B4GALNT3Q6L9W6 998 aa26.45■■□□□ 1.82
C1orf198-201ENST00000366663 SALL2Q9Y467 1007 aaPredicted RBP26.44■■□□□ 1.82
C1orf198-201ENST00000366663 MYT1LQ9UL68 1186 aa26.43■■□□□ 1.82
C1orf198-201ENST00000366663 FAM50AQ14320 339 aaKnown RBP26.42■■□□□ 1.82
C1orf198-201ENST00000366663 FAM9BQ8IZU0 186 aa26.42■■□□□ 1.82
C1orf198-201ENST00000366663 LAS1LQ9Y4W2 734 aaKnown RBP26.39■■□□□ 1.82
C1orf198-201ENST00000366663 MSH5O43196 834 aa26.34■■□□□ 1.81
C1orf198-201ENST00000366663 ARXQ96QS3 562 aa26.34■■□□□ 1.81
C1orf198-201ENST00000366663 NOP58Q9Y2X3 529 aaKnown RBP26.34■■□□□ 1.81
C1orf198-201ENST00000366663 BAZ1AQ9NRL2 1556 aaPredicted RBP26.28■■□□□ 1.8
C1orf198-201ENST00000366663 CEP162Q5TB80 1403 aa26.27■■□□□ 1.8
C1orf198-201ENST00000366663 IL27Q8NEV9 243 aa26.2■■□□□ 1.78
C1orf198-201ENST00000366663 NEFMP07197 916 aa26.16■■□□□ 1.78
C1orf198-201ENST00000366663 SIN3AQ96ST3 1273 aa26.15■■□□□ 1.78
C1orf198-201ENST00000366663 ABCC8Q09428 1581 aa26.15■■□□□ 1.78
C1orf198-201ENST00000366663 CCDC88BA6NC98 1476 aa26.14■■□□□ 1.77
C1orf198-201ENST00000366663 SMARCA4P51532 1647 aa26.02■■□□□ 1.76
C1orf198-201ENST00000366663 PPP4R2Q9NY27 417 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms