RNA–Protein interactions for RNA: ENST00000317635.5

TMEM11-201, Transcript of transmembrane protein 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM11, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM11-201ENST00000317635 NISCHQ9Y2I1 1504 aa46.86■■■■■ 5.09
TMEM11-201ENST00000317635 CCDC180Q9P1Z9 1646 aa40.92■■■■■ 4.14
TMEM11-201ENST00000317635 ZCCHC6Q5VYS8 1495 aaKnown RBP39.34■■■■□ 3.89
TMEM11-201ENST00000317635 DCAF8L2P0C7V8 631 aa38.91■■■■□ 3.82
TMEM11-201ENST00000317635 ABCC9O60706 1549 aa38.9■■■■□ 3.82
TMEM11-201ENST00000317635 DCAF1Q9Y4B6 1507 aa38.67■■■■□ 3.78
TMEM11-201ENST00000317635 SHROOM4Q9ULL8 1493 aa38.31■■■■□ 3.72
TMEM11-201ENST00000317635 MYO15BQ96JP2 1530 aa38.23■■■■□ 3.71
TMEM11-201ENST00000317635 NACADO15069 1562 aa38.12■■■■□ 3.69
TMEM11-201ENST00000317635 RB1CC1Q8TDY2 1594 aa37.87■■■■□ 3.65
TMEM11-201ENST00000317635 SCRIBQ14160 1630 aa37.73■■■■□ 3.63
TMEM11-201ENST00000317635 UNC13AQ9UPW8 1703 aa37.15■■■■□ 3.54
TMEM11-201ENST00000317635 SUPT5HO00267 1087 aaKnown RBP36.78■■■■□ 3.48
TMEM11-201ENST00000317635 BICRAQ9NZM4 1560 aa36.71■■■■□ 3.47
TMEM11-201ENST00000317635 PABPN1Q86U42 306 aaKnown RBP eCLIP36.66■■■■□ 3.46
TMEM11-201ENST00000317635 CECR2Q9BXF3 1484 aa36.46■■■■□ 3.43
TMEM11-201ENST00000317635 RSF1Q96T23 1441 aaPredicted RBP36.31■■■■□ 3.4
TMEM11-201ENST00000317635 MROH2BQ7Z745 1585 aa36.24■■■■□ 3.39
TMEM11-201ENST00000317635 BAZ1AQ9NRL2 1556 aaPredicted RBP36.21■■■■□ 3.39
TMEM11-201ENST00000317635 SMARCA4P51532 1647 aa36.09■■■■□ 3.37
TMEM11-201ENST00000317635 WIZO95785 1651 aa35.97■■■■□ 3.35
TMEM11-201ENST00000317635 EIF4G1Q04637 1599 aaKnown RBP35.64■■■■□ 3.3
TMEM11-201ENST00000317635 PEG3Q9GZU2 1588 aa35.56■■■■□ 3.28
TMEM11-201ENST00000317635 TOP2AP11388 1531 aaKnown RBP35.55■■■■□ 3.28
TMEM11-201ENST00000317635 ATAD2BQ9ULI0 1458 aa35.49■■■■□ 3.27
TMEM11-201ENST00000317635 SMARCA2P51531 1590 aa35.48■■■■□ 3.27
TMEM11-201ENST00000317635 BAZ1BQ9UIG0 1483 aaKnown RBP35.33■■■■□ 3.25
TMEM11-201ENST00000317635 CCDC88BA6NC98 1476 aa35.18■■■■□ 3.22
TMEM11-201ENST00000317635 CC2D2AQ9P2K1 1620 aa35.17■■■■□ 3.22
TMEM11-201ENST00000317635 NCAPD3P42695 1498 aa35.16■■■■□ 3.22
TMEM11-201ENST00000317635 HMGXB3Q12766 1538 aa35.13■■■■□ 3.21
TMEM11-201ENST00000317635 CHIC1Q5VXU3 224 aa35.05■■■■□ 3.2
TMEM11-201ENST00000317635 TRIM41Q8WV44 630 aa34.54■■■■□ 3.12
TMEM11-201ENST00000317635 ABCC8Q09428 1581 aa34.48■■■■□ 3.11
TMEM11-201ENST00000317635 CFTRP13569 1480 aa34.37■■■■□ 3.09
TMEM11-201ENST00000317635 DNAJC5BQ9UF47 199 aa34.34■■■■□ 3.09
TMEM11-201ENST00000317635 CADPSQ9ULU8 1353 aa34.29■■■■□ 3.08
TMEM11-201ENST00000317635 PRDM2Q13029 1718 aa34.26■■■■□ 3.07
TMEM11-201ENST00000317635 WRNQ14191 1432 aaPredicted RBP eCLIP34.21■■■■□ 3.07
TMEM11-201ENST00000317635 SYNJ1O43426 1573 aa34.1■■■■□ 3.05
TMEM11-201ENST00000317635 NESP48681 1621 aa34.1■■■■□ 3.05
TMEM11-201ENST00000317635 LAMC3Q9Y6N6 1575 aa34.03■■■■□ 3.04
TMEM11-201ENST00000317635 FAM9AQ8IZU1 332 aaPredicted RBP33.99■■■■□ 3.03
TMEM11-201ENST00000317635 FANCD2Q9BXW9 1451 aa33.95■■■■□ 3.03
TMEM11-201ENST00000317635 TOP2BQ02880 1626 aa33.94■■■■□ 3.02
TMEM11-201ENST00000317635 BIVM-ERCC5R4GMW8 1640 aa33.91■■■■□ 3.02
TMEM11-201ENST00000317635 CUX1P39880 1505 aa33.89■■■■□ 3.02
TMEM11-201ENST00000317635 PDS5BQ9NTI5 1447 aa33.78■■■■□ 3
TMEM11-201ENST00000317635 SOGA1O94964 1423 aa33.77■■■■□ 3
TMEM11-201ENST00000317635 CEP164Q9UPV0 1460 aa33.76■■■■□ 3
TMEM11-201ENST00000317635 LOC105371045A0A1W2PR82 267 aa33.76■■■□□ 2.99
TMEM11-201ENST00000317635 KIF21AQ7Z4S6 1674 aa33.71■■■□□ 2.99
TMEM11-201ENST00000317635 RUSC2Q8N2Y8 1516 aa33.65■■■□□ 2.98
TMEM11-201ENST00000317635 DNMBPQ6XZF7 1577 aa33.62■■■□□ 2.97
TMEM11-201ENST00000317635 EEA1Q15075 1411 aa33.61■■■□□ 2.97
TMEM11-201ENST00000317635 EHMT2Q96KQ7 1210 aa33.59■■■□□ 2.97
TMEM11-201ENST00000317635 TOPBP1Q92547 1522 aa33.57■■■□□ 2.96
TMEM11-201ENST00000317635 FGD5Q6ZNL6 1462 aa33.56■■■□□ 2.96
TMEM11-201ENST00000317635 URB2Q14146 1524 aaKnown RBP33.53■■■□□ 2.96
TMEM11-201ENST00000317635 CSRNP3Q8WYN3 585 aa33.48■■■□□ 2.95
TMEM11-201ENST00000317635 POLA1P09884 1462 aaPredicted RBP33.39■■■□□ 2.94
TMEM11-201ENST00000317635 ERCC6Q03468 1493 aa33.38■■■□□ 2.93
TMEM11-201ENST00000317635 MRC2Q9UBG0 1479 aa33.37■■■□□ 2.93
TMEM11-201ENST00000317635 KIF27Q86VH2 1401 aa33.36■■■□□ 2.93
TMEM11-201ENST00000317635 CUX2O14529 1486 aa33.33■■■□□ 2.93
TMEM11-201ENST00000317635 RAD54L2Q9Y4B4 1467 aa33.32■■■□□ 2.92
TMEM11-201ENST00000317635 KIF21BO75037 1637 aa33.22■■■□□ 2.91
TMEM11-201ENST00000317635 GOLGA3Q08378 1498 aa33.21■■■□□ 2.91
TMEM11-201ENST00000317635 ABCA10Q8WWZ4 1543 aa33.2■■■□□ 2.91
TMEM11-201ENST00000317635 WDR62O43379 1518 aa33.18■■■□□ 2.9
TMEM11-201ENST00000317635 WDR97A6NE52 1622 aa33.15■■■□□ 2.9
TMEM11-201ENST00000317635 THOC2Q8NI27 1593 aaKnown RBP33.13■■■□□ 2.89
TMEM11-201ENST00000317635 UBTFP17480 764 aaKnown RBP33.12■■■□□ 2.89
TMEM11-201ENST00000317635 RAPGEF2Q9Y4G8 1499 aa33.08■■■□□ 2.89
TMEM11-201ENST00000317635 TARBP1Q13395 1621 aaKnown RBP33.06■■■□□ 2.88
TMEM11-201ENST00000317635 PRXQ9BXM0 1461 aa33.05■■■□□ 2.88
TMEM11-201ENST00000317635 IGF1RP08069 1367 aa33.04■■■□□ 2.88
TMEM11-201ENST00000317635 TNIKQ9UKE5 1360 aa33.03■■■□□ 2.88
TMEM11-201ENST00000317635 ERICH3Q5RHP9 1530 aa33■■■□□ 2.87
TMEM11-201ENST00000317635 TDRD9Q8NDG6 1382 aaKnown RBP33■■■□□ 2.87
TMEM11-201ENST00000317635 ABCA5Q8WWZ7 1642 aa32.97■■■□□ 2.87
TMEM11-201ENST00000317635 IFT140Q96RY7 1462 aa32.93■■■□□ 2.86
TMEM11-201ENST00000317635 GAPVD1Q14C86 1478 aa32.92■■■□□ 2.86
TMEM11-201ENST00000317635 CEP162Q5TB80 1403 aa32.9■■■□□ 2.86
TMEM11-201ENST00000317635 CARMIL1Q5VZK9 1371 aa32.9■■■□□ 2.86
TMEM11-201ENST00000317635 CUL7Q14999 1698 aa32.84■■■□□ 2.85
TMEM11-201ENST00000317635 AQRO60306 1485 aaKnown RBP eCLIP32.81■■■□□ 2.84
TMEM11-201ENST00000317635 PBRM1Q86U86 1689 aa32.8■■■□□ 2.84
TMEM11-201ENST00000317635 ZNF608Q9ULD9 1512 aaPredicted RBP32.79■■■□□ 2.84
TMEM11-201ENST00000317635 RANGAP1P46060 587 aaPredicted RBP32.72■■■□□ 2.83
TMEM11-201ENST00000317635 EIF4G3O43432 1585 aaKnown RBP32.7■■■□□ 2.82
TMEM11-201ENST00000317635 CLIP1P30622 1438 aa32.68■■■□□ 2.82
TMEM11-201ENST00000317635 GRIN2BQ13224 1484 aa32.67■■■□□ 2.82
TMEM11-201ENST00000317635 ADAMTS12P58397 1594 aa32.58■■■□□ 2.81
TMEM11-201ENST00000317635 FHAD1B1AJZ9 1412 aa32.54■■■□□ 2.8
TMEM11-201ENST00000317635 SNAPC4Q5SXM2 1469 aa32.51■■■□□ 2.8
TMEM11-201ENST00000317635 CTTNBP2Q8WZ74 1663 aa32.5■■■□□ 2.79
TMEM11-201ENST00000317635 MAGI1Q96QZ7 1491 aaPredicted RBP32.39■■■□□ 2.78
TMEM11-201ENST00000317635 ARAP1Q96P48 1450 aa32.36■■■□□ 2.77
TMEM11-201ENST00000317635 ARHGAP35Q9NRY4 1499 aa32.36■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms