RNA–Protein interactions for RNA: ENST00000390606.3

IGHV3-20-201, Transcript of immunoglobulin heavy variable 3-20, humanhuman

APPRIS P1 BASIC

Gene IGHV3-20, Length 415 nt, Biotype IG V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-20-201ENST00000390606 NISCHQ9Y2I1 1504 aa53.72■■■■■ 6.19
IGHV3-20-201ENST00000390606 CCDC180Q9P1Z9 1646 aa47.71■■■■■ 5.23
IGHV3-20-201ENST00000390606 ABCC9O60706 1549 aa46.78■■■■■ 5.08
IGHV3-20-201ENST00000390606 RB1CC1Q8TDY2 1594 aa44.94■■■■■ 4.78
IGHV3-20-201ENST00000390606 NACADO15069 1562 aa44.9■■■■■ 4.78
IGHV3-20-201ENST00000390606 DCAF8L2P0C7V8 631 aa44.84■■■■■ 4.77
IGHV3-20-201ENST00000390606 ZCCHC6Q5VYS8 1495 aaKnown RBP44.75■■■■■ 4.75
IGHV3-20-201ENST00000390606 MYO15BQ96JP2 1530 aa44.65■■■■■ 4.74
IGHV3-20-201ENST00000390606 DCAF1Q9Y4B6 1507 aa44.45■■■■■ 4.71
IGHV3-20-201ENST00000390606 UNC13AQ9UPW8 1703 aa43.92■■■■■ 4.62
IGHV3-20-201ENST00000390606 PABPN1Q86U42 306 aaKnown RBP eCLIP43.72■■■■■ 4.59
IGHV3-20-201ENST00000390606 BICRAQ9NZM4 1560 aa43.65■■■■■ 4.58
IGHV3-20-201ENST00000390606 SCRIBQ14160 1630 aa43.55■■■■■ 4.56
IGHV3-20-201ENST00000390606 SHROOM4Q9ULL8 1493 aa43.14■■■■■ 4.5
IGHV3-20-201ENST00000390606 DNAJC5BQ9UF47 199 aa43.06■■■■■ 4.48
IGHV3-20-201ENST00000390606 EIF4G1Q04637 1599 aaKnown RBP42.47■■■■■ 4.39
IGHV3-20-201ENST00000390606 CC2D2AQ9P2K1 1620 aa42.3■■■■■ 4.36
IGHV3-20-201ENST00000390606 CECR2Q9BXF3 1484 aa42.03■■■■■ 4.32
IGHV3-20-201ENST00000390606 SMARCA4P51532 1647 aa41.66■■■■■ 4.26
IGHV3-20-201ENST00000390606 BAZ1AQ9NRL2 1556 aaPredicted RBP41.6■■■■■ 4.25
IGHV3-20-201ENST00000390606 ATAD2BQ9ULI0 1458 aa41.49■■■■■ 4.23
IGHV3-20-201ENST00000390606 NCAPD3P42695 1498 aa41.47■■■■■ 4.23
IGHV3-20-201ENST00000390606 MROH2BQ7Z745 1585 aa41.42■■■■■ 4.22
IGHV3-20-201ENST00000390606 SMARCA2P51531 1590 aa41.39■■■■■ 4.22
IGHV3-20-201ENST00000390606 PEG3Q9GZU2 1588 aa41.29■■■■■ 4.2
IGHV3-20-201ENST00000390606 HMGXB3Q12766 1538 aa41.23■■■■■ 4.19
IGHV3-20-201ENST00000390606 BAZ1BQ9UIG0 1483 aaKnown RBP41.1■■■■■ 4.17
IGHV3-20-201ENST00000390606 RSF1Q96T23 1441 aaPredicted RBP40.93■■■■■ 4.14
IGHV3-20-201ENST00000390606 WIZO95785 1651 aa40.92■■■■■ 4.14
IGHV3-20-201ENST00000390606 TOP2AP11388 1531 aaKnown RBP40.49■■■■■ 4.07
IGHV3-20-201ENST00000390606 NESP48681 1621 aa40.49■■■■■ 4.07
IGHV3-20-201ENST00000390606 LAMC3Q9Y6N6 1575 aa40.34■■■■■ 4.05
IGHV3-20-201ENST00000390606 ERCC6Q03468 1493 aa40.28■■■■■ 4.04
IGHV3-20-201ENST00000390606 CADPSQ9ULU8 1353 aa40.25■■■■■ 4.03
IGHV3-20-201ENST00000390606 PDS5BQ9NTI5 1447 aa40.08■■■■■ 4.01
IGHV3-20-201ENST00000390606 CCDC88BA6NC98 1476 aa40.04■■■■■ 4
IGHV3-20-201ENST00000390606 CFTRP13569 1480 aa40.01■■■■■ 4
IGHV3-20-201ENST00000390606 KIF21AQ7Z4S6 1674 aa39.95■■■■□ 3.99
IGHV3-20-201ENST00000390606 CUX2O14529 1486 aa39.9■■■■□ 3.98
IGHV3-20-201ENST00000390606 THOC2Q8NI27 1593 aaKnown RBP39.86■■■■□ 3.97
IGHV3-20-201ENST00000390606 SUPT5HO00267 1087 aaKnown RBP39.81■■■■□ 3.96
IGHV3-20-201ENST00000390606 FANCD2Q9BXW9 1451 aa39.78■■■■□ 3.96
IGHV3-20-201ENST00000390606 CEP164Q9UPV0 1460 aa39.71■■■■□ 3.95
IGHV3-20-201ENST00000390606 MRC2Q9UBG0 1479 aa39.68■■■■□ 3.94
IGHV3-20-201ENST00000390606 PRDM2Q13029 1718 aa39.6■■■■□ 3.93
IGHV3-20-201ENST00000390606 WDR62O43379 1518 aa39.56■■■■□ 3.92
IGHV3-20-201ENST00000390606 URB2Q14146 1524 aaKnown RBP39.4■■■■□ 3.9
IGHV3-20-201ENST00000390606 TOPBP1Q92547 1522 aa39.14■■■■□ 3.86
IGHV3-20-201ENST00000390606 ABCC8Q09428 1581 aa39.11■■■■□ 3.85
IGHV3-20-201ENST00000390606 DNMBPQ6XZF7 1577 aa39.07■■■■□ 3.84
IGHV3-20-201ENST00000390606 IFT140Q96RY7 1462 aa38.9■■■■□ 3.82
IGHV3-20-201ENST00000390606 CUX1P39880 1505 aa38.84■■■■□ 3.81
IGHV3-20-201ENST00000390606 POLA1P09884 1462 aaPredicted RBP38.81■■■■□ 3.8
IGHV3-20-201ENST00000390606 DNAJC5Q9H3Z4 198 aa38.77■■■■□ 3.8
IGHV3-20-201ENST00000390606 ZNF608Q9ULD9 1512 aaPredicted RBP38.75■■■■□ 3.79
IGHV3-20-201ENST00000390606 TARBP1Q13395 1621 aaKnown RBP38.71■■■■□ 3.79
IGHV3-20-201ENST00000390606 FGD5Q6ZNL6 1462 aa38.71■■■■□ 3.79
IGHV3-20-201ENST00000390606 RAD54L2Q9Y4B4 1467 aa38.66■■■■□ 3.78
IGHV3-20-201ENST00000390606 SOGA1O94964 1423 aa38.64■■■■□ 3.78
IGHV3-20-201ENST00000390606 WRNQ14191 1432 aaPredicted RBP eCLIP38.56■■■■□ 3.76
IGHV3-20-201ENST00000390606 EIF4G3O43432 1585 aaKnown RBP38.55■■■■□ 3.76
IGHV3-20-201ENST00000390606 AQRO60306 1485 aaKnown RBP eCLIP38.52■■■■□ 3.76
IGHV3-20-201ENST00000390606 SYNJ1O43426 1573 aa38.47■■■■□ 3.75
IGHV3-20-201ENST00000390606 TOP2BQ02880 1626 aa38.46■■■■□ 3.75
IGHV3-20-201ENST00000390606 BIVM-ERCC5R4GMW8 1640 aa38.45■■■■□ 3.75
IGHV3-20-201ENST00000390606 TDRD9Q8NDG6 1382 aaKnown RBP38.44■■■■□ 3.74
IGHV3-20-201ENST00000390606 WDR97A6NE52 1622 aa38.37■■■■□ 3.73
IGHV3-20-201ENST00000390606 ABCA10Q8WWZ4 1543 aa38.34■■■■□ 3.73
IGHV3-20-201ENST00000390606 OSCARQ8IYS5 282 aa38.25■■■■□ 3.71
IGHV3-20-201ENST00000390606 GRIN2BQ13224 1484 aa38.19■■■■□ 3.7
IGHV3-20-201ENST00000390606 GAPVD1Q14C86 1478 aa38.19■■■■□ 3.7
IGHV3-20-201ENST00000390606 ABCA5Q8WWZ7 1642 aa38.16■■■■□ 3.7
IGHV3-20-201ENST00000390606 SNAPC4Q5SXM2 1469 aa38.15■■■■□ 3.7
IGHV3-20-201ENST00000390606 MAGI1Q96QZ7 1491 aaPredicted RBP38.09■■■■□ 3.69
IGHV3-20-201ENST00000390606 PBRM1Q86U86 1689 aa38.06■■■■□ 3.68
IGHV3-20-201ENST00000390606 CHD1O14646 1710 aa38.05■■■■□ 3.68
IGHV3-20-201ENST00000390606 FBLN2P98095 1184 aa38.02■■■■□ 3.68
IGHV3-20-201ENST00000390606 SYNJ2O15056 1496 aa37.95■■■■□ 3.67
IGHV3-20-201ENST00000390606 CHMP7Q8WUX9 453 aaPredicted RBP37.92■■■■□ 3.66
IGHV3-20-201ENST00000390606 ERICH3Q5RHP9 1530 aa37.86■■■■□ 3.65
IGHV3-20-201ENST00000390606 ADAMTS12P58397 1594 aa37.8■■■■□ 3.64
IGHV3-20-201ENST00000390606 FHAD1B1AJZ9 1412 aa37.76■■■■□ 3.63
IGHV3-20-201ENST00000390606 KIF27Q86VH2 1401 aa37.75■■■■□ 3.63
IGHV3-20-201ENST00000390606 GRIN2AQ12879 1464 aa37.71■■■■□ 3.63
IGHV3-20-201ENST00000390606 CLASP1Q7Z460 1538 aa37.7■■■■□ 3.63
IGHV3-20-201ENST00000390606 IGF1RP08069 1367 aa37.65■■■■□ 3.62
IGHV3-20-201ENST00000390606 ARHGEF11O15085 1522 aa37.63■■■■□ 3.61
IGHV3-20-201ENST00000390606 RIMBP3CA6NJZ7 1639 aa37.62■■■■□ 3.61
IGHV3-20-201ENST00000390606 RIMBP3BA6NNM3 1639 aa37.62■■■■□ 3.61
IGHV3-20-201ENST00000390606 RIMBP3Q9UFD9 1639 aa37.62■■■■□ 3.61
IGHV3-20-201ENST00000390606 TRIM41Q8WV44 630 aa37.59■■■■□ 3.61
IGHV3-20-201ENST00000390606 NUP160Q12769 1436 aa37.57■■■■□ 3.6
IGHV3-20-201ENST00000390606 CEP170Q5SW79 1584 aa37.52■■■■□ 3.6
IGHV3-20-201ENST00000390606 CUL7Q14999 1698 aa37.46■■■■□ 3.59
IGHV3-20-201ENST00000390606 RUSC2Q8N2Y8 1516 aa37.44■■■■□ 3.58
IGHV3-20-201ENST00000390606 CARMIL1Q5VZK9 1371 aa37.4■■■■□ 3.58
IGHV3-20-201ENST00000390606 ARAP1Q96P48 1450 aa37.35■■■■□ 3.57
IGHV3-20-201ENST00000390606 CYB5RLQ6IPT4 315 aa37.28■■■■□ 3.56
IGHV3-20-201ENST00000390606 SHROOM2Q13796 1616 aa37.26■■■■□ 3.56
IGHV3-20-201ENST00000390606 ERCC6L2Q5T890 1561 aa37.19■■■■□ 3.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms