RNA–Protein interactions for RNA: ENST00000370990.5

SERBP1-202, Transcript of SERPINE1 mRNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SERBP1, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERBP1-202ENST00000370990 NISCHQ9Y2I1 1504 aa51.36■■■■■ 5.81
SERBP1-202ENST00000370990 CCDC180Q9P1Z9 1646 aa45.42■■■■■ 4.86
SERBP1-202ENST00000370990 ABCC9O60706 1549 aa44.83■■■■■ 4.77
SERBP1-202ENST00000370990 ZCCHC6Q5VYS8 1495 aaKnown RBP42.9■■■■■ 4.46
SERBP1-202ENST00000370990 DCAF8L2P0C7V8 631 aa42.7■■■■■ 4.43
SERBP1-202ENST00000370990 RB1CC1Q8TDY2 1594 aa42.65■■■■■ 4.42
SERBP1-202ENST00000370990 NACADO15069 1562 aa42.54■■■■■ 4.4
SERBP1-202ENST00000370990 DCAF1Q9Y4B6 1507 aa42.46■■■■■ 4.39
SERBP1-202ENST00000370990 MYO15BQ96JP2 1530 aa42.41■■■■■ 4.38
SERBP1-202ENST00000370990 DNAJC5BQ9UF47 199 aa42.03■■■■■ 4.32
SERBP1-202ENST00000370990 PABPN1Q86U42 306 aaKnown RBP eCLIP41.8■■■■■ 4.28
SERBP1-202ENST00000370990 UNC13AQ9UPW8 1703 aa41.73■■■■■ 4.27
SERBP1-202ENST00000370990 SCRIBQ14160 1630 aa41.55■■■■■ 4.24
SERBP1-202ENST00000370990 BICRAQ9NZM4 1560 aa41.49■■■■■ 4.23
SERBP1-202ENST00000370990 SHROOM4Q9ULL8 1493 aa40.96■■■■■ 4.15
SERBP1-202ENST00000370990 CC2D2AQ9P2K1 1620 aa40.48■■■■■ 4.07
SERBP1-202ENST00000370990 EIF4G1Q04637 1599 aaKnown RBP40.42■■■■■ 4.06
SERBP1-202ENST00000370990 CECR2Q9BXF3 1484 aa40.34■■■■■ 4.05
SERBP1-202ENST00000370990 SMARCA4P51532 1647 aa39.77■■■■□ 3.96
SERBP1-202ENST00000370990 BAZ1AQ9NRL2 1556 aaPredicted RBP39.74■■■■□ 3.95
SERBP1-202ENST00000370990 MROH2BQ7Z745 1585 aa39.64■■■■□ 3.94
SERBP1-202ENST00000370990 ATAD2BQ9ULI0 1458 aa39.38■■■■□ 3.9
SERBP1-202ENST00000370990 RSF1Q96T23 1441 aaPredicted RBP39.33■■■■□ 3.89
SERBP1-202ENST00000370990 SMARCA2P51531 1590 aa39.32■■■■□ 3.89
SERBP1-202ENST00000370990 PEG3Q9GZU2 1588 aa39.32■■■■□ 3.89
SERBP1-202ENST00000370990 WIZO95785 1651 aa39.28■■■■□ 3.88
SERBP1-202ENST00000370990 NCAPD3P42695 1498 aa39.24■■■■□ 3.87
SERBP1-202ENST00000370990 HMGXB3Q12766 1538 aa39.11■■■■□ 3.85
SERBP1-202ENST00000370990 BAZ1BQ9UIG0 1483 aaKnown RBP39.07■■■■□ 3.85
SERBP1-202ENST00000370990 TOP2AP11388 1531 aaKnown RBP38.81■■■■□ 3.8
SERBP1-202ENST00000370990 SUPT5HO00267 1087 aaKnown RBP38.76■■■■□ 3.8
SERBP1-202ENST00000370990 ERCC6Q03468 1493 aa38.63■■■■□ 3.77
SERBP1-202ENST00000370990 NESP48681 1621 aa38.58■■■■□ 3.77
SERBP1-202ENST00000370990 CUX2O14529 1486 aa38.51■■■■□ 3.76
SERBP1-202ENST00000370990 DNAJC5Q9H3Z4 198 aa38.41■■■■□ 3.74
SERBP1-202ENST00000370990 CCDC88BA6NC98 1476 aa38.37■■■■□ 3.73
SERBP1-202ENST00000370990 LAMC3Q9Y6N6 1575 aa38.23■■■■□ 3.71
SERBP1-202ENST00000370990 CADPSQ9ULU8 1353 aa38.13■■■■□ 3.69
SERBP1-202ENST00000370990 THOC2Q8NI27 1593 aaKnown RBP38.11■■■■□ 3.69
SERBP1-202ENST00000370990 CFTRP13569 1480 aa38.03■■■■□ 3.68
SERBP1-202ENST00000370990 KIF21AQ7Z4S6 1674 aa38.03■■■■□ 3.68
SERBP1-202ENST00000370990 PDS5BQ9NTI5 1447 aa38.01■■■■□ 3.67
SERBP1-202ENST00000370990 PRDM2Q13029 1718 aa37.88■■■■□ 3.65
SERBP1-202ENST00000370990 FANCD2Q9BXW9 1451 aa37.72■■■■□ 3.63
SERBP1-202ENST00000370990 MRC2Q9UBG0 1479 aa37.7■■■■□ 3.63
SERBP1-202ENST00000370990 CEP164Q9UPV0 1460 aa37.61■■■■□ 3.61
SERBP1-202ENST00000370990 WDR62O43379 1518 aa37.61■■■■□ 3.61
SERBP1-202ENST00000370990 URB2Q14146 1524 aaKnown RBP37.36■■■■□ 3.57
SERBP1-202ENST00000370990 ABCC8Q09428 1581 aa37.2■■■■□ 3.54
SERBP1-202ENST00000370990 TOPBP1Q92547 1522 aa37.19■■■■□ 3.54
SERBP1-202ENST00000370990 DNMBPQ6XZF7 1577 aa37.19■■■■□ 3.54
SERBP1-202ENST00000370990 CUX1P39880 1505 aa37.15■■■■□ 3.54
SERBP1-202ENST00000370990 WRNQ14191 1432 aaPredicted RBP eCLIP37.05■■■■□ 3.52
SERBP1-202ENST00000370990 SYNJ1O43426 1573 aa37.01■■■■□ 3.52
SERBP1-202ENST00000370990 BIVM-ERCC5R4GMW8 1640 aa36.96■■■■□ 3.51
SERBP1-202ENST00000370990 TOP2BQ02880 1626 aa36.94■■■■□ 3.5
SERBP1-202ENST00000370990 POLA1P09884 1462 aaPredicted RBP36.92■■■■□ 3.5
SERBP1-202ENST00000370990 FGD5Q6ZNL6 1462 aa36.91■■■■□ 3.5
SERBP1-202ENST00000370990 ZNF608Q9ULD9 1512 aaPredicted RBP36.81■■■■□ 3.48
SERBP1-202ENST00000370990 IFT140Q96RY7 1462 aa36.81■■■■□ 3.48
SERBP1-202ENST00000370990 OSCARQ8IYS5 282 aa36.81■■■■□ 3.48
SERBP1-202ENST00000370990 RAD54L2Q9Y4B4 1467 aa36.79■■■■□ 3.48
SERBP1-202ENST00000370990 TARBP1Q13395 1621 aaKnown RBP36.78■■■■□ 3.48
SERBP1-202ENST00000370990 TRIM41Q8WV44 630 aa36.78■■■■□ 3.48
SERBP1-202ENST00000370990 SOGA1O94964 1423 aa36.74■■■■□ 3.47
SERBP1-202ENST00000370990 WDR97A6NE52 1622 aa36.64■■■■□ 3.46
SERBP1-202ENST00000370990 EIF4G3O43432 1585 aaKnown RBP36.56■■■■□ 3.44
SERBP1-202ENST00000370990 ABCA10Q8WWZ4 1543 aa36.55■■■■□ 3.44
SERBP1-202ENST00000370990 TDRD9Q8NDG6 1382 aaKnown RBP36.51■■■■□ 3.43
SERBP1-202ENST00000370990 AQRO60306 1485 aaKnown RBP eCLIP36.5■■■■□ 3.432e-8■■■□□ 18
SERBP1-202ENST00000370990 CHIC1Q5VXU3 224 aa36.48■■■■□ 3.43
SERBP1-202ENST00000370990 ABCA5Q8WWZ7 1642 aa36.41■■■■□ 3.42
SERBP1-202ENST00000370990 GAPVD1Q14C86 1478 aa36.34■■■■□ 3.41
SERBP1-202ENST00000370990 RIMBP3CA6NJZ7 1639 aa36.33■■■■□ 3.41
SERBP1-202ENST00000370990 RIMBP3BA6NNM3 1639 aa36.33■■■■□ 3.41
SERBP1-202ENST00000370990 RIMBP3Q9UFD9 1639 aa36.33■■■■□ 3.41
SERBP1-202ENST00000370990 PBRM1Q86U86 1689 aa36.31■■■■□ 3.4
SERBP1-202ENST00000370990 CHD1O14646 1710 aa36.26■■■■□ 3.39
SERBP1-202ENST00000370990 GRIN2BQ13224 1484 aa36.24■■■■□ 3.39
SERBP1-202ENST00000370990 ARHGEF11O15085 1522 aa36.22■■■■□ 3.39
SERBP1-202ENST00000370990 KIF27Q86VH2 1401 aa36.2■■■■□ 3.39
SERBP1-202ENST00000370990 FBLN2P98095 1184 aa36.19■■■■□ 3.38
SERBP1-202ENST00000370990 RUSC2Q8N2Y8 1516 aa36.17■■■■□ 3.38
SERBP1-202ENST00000370990 SNAPC4Q5SXM2 1469 aa36.17■■■■□ 3.38
SERBP1-202ENST00000370990 ERICH3Q5RHP9 1530 aa36.11■■■■□ 3.37
SERBP1-202ENST00000370990 MAGI1Q96QZ7 1491 aaPredicted RBP36.08■■■■□ 3.37
SERBP1-202ENST00000370990 IGF1RP08069 1367 aa36.03■■■■□ 3.36
SERBP1-202ENST00000370990 ADAMTS12P58397 1594 aa36.01■■■■□ 3.35
SERBP1-202ENST00000370990 CYB5RLQ6IPT4 315 aa35.97■■■■□ 3.35
SERBP1-202ENST00000370990 SYNJ2O15056 1496 aa35.95■■■■□ 3.34
SERBP1-202ENST00000370990 CHMP7Q8WUX9 453 aaPredicted RBP35.93■■■■□ 3.34
SERBP1-202ENST00000370990 FHAD1B1AJZ9 1412 aa35.92■■■■□ 3.34
SERBP1-202ENST00000370990 CUL7Q14999 1698 aa35.91■■■■□ 3.34
SERBP1-202ENST00000370990 ARAP1Q96P48 1450 aa35.91■■■■□ 3.34
SERBP1-202ENST00000370990 CLASP1Q7Z460 1538 aa35.87■■■■□ 3.33
SERBP1-202ENST00000370990 FAM9AQ8IZU1 332 aaPredicted RBP35.84■■■■□ 3.33
SERBP1-202ENST00000370990 EEA1Q15075 1411 aa35.82■■■■□ 3.33
SERBP1-202ENST00000370990 CARMIL1Q5VZK9 1371 aa35.82■■■■□ 3.32
SERBP1-202ENST00000370990 GRIN2AQ12879 1464 aa35.8■■■■□ 3.32
SERBP1-202ENST00000370990 CSRNP3Q8WYN3 585 aa35.75■■■■□ 3.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms