RNA–Protein interactions for RNA: ENST00000461064.5

FAM53A-202, Transcript of family with sequence similarity 53 member A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene FAM53A, Length 2,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53A-202ENST00000461064 NISCHQ9Y2I1 1504 aa42.38■■■■■ 4.38
FAM53A-202ENST00000461064 CCDC180Q9P1Z9 1646 aa36.58■■■■□ 3.45
FAM53A-202ENST00000461064 ZCCHC6Q5VYS8 1495 aaKnown RBP35.71■■■■□ 3.31
FAM53A-202ENST00000461064 SHROOM4Q9ULL8 1493 aa35.32■■■■□ 3.24
FAM53A-202ENST00000461064 DCAF8L2P0C7V8 631 aa34.98■■■■□ 3.19
FAM53A-202ENST00000461064 DCAF1Q9Y4B6 1507 aa34.92■■■■□ 3.18
FAM53A-202ENST00000461064 SUPT5HO00267 1087 aaKnown RBP34.59■■■■□ 3.13
FAM53A-202ENST00000461064 ABCC9O60706 1549 aa34.28■■■■□ 3.08
FAM53A-202ENST00000461064 MYO15BQ96JP2 1530 aa34.25■■■■□ 3.07
FAM53A-202ENST00000461064 NACADO15069 1562 aa33.94■■■■□ 3.02
FAM53A-202ENST00000461064 SCRIBQ14160 1630 aa33.91■■■■□ 3.02
FAM53A-202ENST00000461064 CHIC1Q5VXU3 224 aa33.67■■■□□ 2.98
FAM53A-202ENST00000461064 RB1CC1Q8TDY2 1594 aa33.53■■■□□ 2.96
FAM53A-202ENST00000461064 RSF1Q96T23 1441 aaPredicted RBP33.16■■■□□ 2.9
FAM53A-202ENST00000461064 UNC13AQ9UPW8 1703 aa33.05■■■□□ 2.88
FAM53A-202ENST00000461064 CECR2Q9BXF3 1484 aa33.02■■■□□ 2.88
FAM53A-202ENST00000461064 MROH2BQ7Z745 1585 aa32.85■■■□□ 2.85
FAM53A-202ENST00000461064 BICRAQ9NZM4 1560 aa32.65■■■□□ 2.82
FAM53A-202ENST00000461064 WIZO95785 1651 aa32.65■■■□□ 2.82
FAM53A-202ENST00000461064 BAZ1AQ9NRL2 1556 aaPredicted RBP32.63■■■□□ 2.81
FAM53A-202ENST00000461064 LOC105371045A0A1W2PR82 267 aa32.54■■■□□ 2.8
FAM53A-202ENST00000461064 PABPN1Q86U42 306 aaKnown RBP eCLIP32.51■■■□□ 2.79
FAM53A-202ENST00000461064 SMARCA4P51532 1647 aa32.47■■■□□ 2.79
FAM53A-202ENST00000461064 HRCP23327 699 aa32.42■■■□□ 2.78
FAM53A-202ENST00000461064 PCGF6Q9BYE7 350 aa32.41■■■□□ 2.78
FAM53A-202ENST00000461064 TRIM41Q8WV44 630 aa32.34■■■□□ 2.77
FAM53A-202ENST00000461064 TOP2AP11388 1531 aaKnown RBP32.19■■■□□ 2.74
FAM53A-202ENST00000461064 PEG3Q9GZU2 1588 aa31.98■■■□□ 2.71
FAM53A-202ENST00000461064 SMARCA2P51531 1590 aa31.97■■■□□ 2.71
FAM53A-202ENST00000461064 TRIM26Q12899 539 aaPredicted RBP31.97■■■□□ 2.71
FAM53A-202ENST00000461064 EIF4G1Q04637 1599 aaKnown RBP31.96■■■□□ 2.71
FAM53A-202ENST00000461064 CCDC88BA6NC98 1476 aa31.95■■■□□ 2.71
FAM53A-202ENST00000461064 FAM9AQ8IZU1 332 aaPredicted RBP31.91■■■□□ 2.7
FAM53A-202ENST00000461064 ATAD2BQ9ULI0 1458 aa31.79■■■□□ 2.68
FAM53A-202ENST00000461064 BAZ1BQ9UIG0 1483 aaKnown RBP31.62■■■□□ 2.65
FAM53A-202ENST00000461064 PPARGC1BQ86YN6 1023 aaKnown RBP31.58■■■□□ 2.65
FAM53A-202ENST00000461064 ABCC8Q09428 1581 aa31.55■■■□□ 2.64
FAM53A-202ENST00000461064 EHMT2Q96KQ7 1210 aa31.53■■■□□ 2.64
FAM53A-202ENST00000461064 NCAPD3P42695 1498 aa31.37■■■□□ 2.61
FAM53A-202ENST00000461064 HMGXB3Q12766 1538 aa31.34■■■□□ 2.61
FAM53A-202ENST00000461064 ZEB1P37275 1124 aaPredicted RBP31.29■■■□□ 2.6
FAM53A-202ENST00000461064 EEA1Q15075 1411 aa31.19■■■□□ 2.58
FAM53A-202ENST00000461064 WRNQ14191 1432 aaPredicted RBP eCLIP31.15■■■□□ 2.58
FAM53A-202ENST00000461064 SOGA1O94964 1423 aa31.14■■■□□ 2.58
FAM53A-202ENST00000461064 SYNJ1O43426 1573 aa31.07■■■□□ 2.56
FAM53A-202ENST00000461064 TNIKQ9UKE5 1360 aa31.02■■■□□ 2.56
FAM53A-202ENST00000461064 CEP162Q5TB80 1403 aa31.01■■■□□ 2.56
FAM53A-202ENST00000461064 CSRNP3Q8WYN3 585 aa31■■■□□ 2.55
FAM53A-202ENST00000461064 CC2D2AQ9P2K1 1620 aa30.99■■■□□ 2.55
FAM53A-202ENST00000461064 RUSC2Q8N2Y8 1516 aa30.98■■■□□ 2.55
FAM53A-202ENST00000461064 GOLGA3Q08378 1498 aa30.89■■■□□ 2.54
FAM53A-202ENST00000461064 CFTRP13569 1480 aa30.86■■■□□ 2.53
FAM53A-202ENST00000461064 TOP2BQ02880 1626 aa30.82■■■□□ 2.52
FAM53A-202ENST00000461064 UBTFP17480 764 aaKnown RBP30.8■■■□□ 2.52
FAM53A-202ENST00000461064 BIVM-ERCC5R4GMW8 1640 aa30.77■■■□□ 2.52
FAM53A-202ENST00000461064 KIF21BO75037 1637 aa30.77■■■□□ 2.52
FAM53A-202ENST00000461064 CEP164Q9UPV0 1460 aa30.75■■■□□ 2.51
FAM53A-202ENST00000461064 PRDM2Q13029 1718 aa30.71■■■□□ 2.51
FAM53A-202ENST00000461064 CUX1P39880 1505 aa30.66■■■□□ 2.5
FAM53A-202ENST00000461064 CADPSQ9ULU8 1353 aa30.63■■■□□ 2.49
FAM53A-202ENST00000461064 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.58■■■□□ 2.49
FAM53A-202ENST00000461064 CCER1Q8TC90 406 aaPredicted RBP30.56■■■□□ 2.48
FAM53A-202ENST00000461064 TTBK1Q5TCY1 1321 aaPredicted RBP30.52■■■□□ 2.48
FAM53A-202ENST00000461064 CLIP1P30622 1438 aa30.47■■■□□ 2.47
FAM53A-202ENST00000461064 RAPGEF2Q9Y4G8 1499 aa30.44■■■□□ 2.46
FAM53A-202ENST00000461064 VPS8Q8N3P4 1428 aa30.36■■■□□ 2.45
FAM53A-202ENST00000461064 NESP48681 1621 aa30.32■■■□□ 2.44
FAM53A-202ENST00000461064 FANCD2Q9BXW9 1451 aa30.32■■■□□ 2.44
FAM53A-202ENST00000461064 ERICH3Q5RHP9 1530 aa30.31■■■□□ 2.44
FAM53A-202ENST00000461064 KIF27Q86VH2 1401 aa30.26■■■□□ 2.44
FAM53A-202ENST00000461064 PRXQ9BXM0 1461 aa30.26■■■□□ 2.43
FAM53A-202ENST00000461064 DNAJC5BQ9UF47 199 aa30.25■■■□□ 2.43
FAM53A-202ENST00000461064 FGD5Q6ZNL6 1462 aa30.21■■■□□ 2.43
FAM53A-202ENST00000461064 LAMC3Q9Y6N6 1575 aa30.18■■■□□ 2.42
FAM53A-202ENST00000461064 APLP2Q06481 763 aa30.15■■■□□ 2.42
FAM53A-202ENST00000461064 CUX2O14529 1486 aa30.12■■■□□ 2.41
FAM53A-202ENST00000461064 DNMBPQ6XZF7 1577 aa30.12■■■□□ 2.41
FAM53A-202ENST00000461064 TOPBP1Q92547 1522 aa30.07■■■□□ 2.4
FAM53A-202ENST00000461064 RANGAP1P46060 587 aaPredicted RBP30.05■■■□□ 2.4
FAM53A-202ENST00000461064 IGF1RP08069 1367 aa30.02■■■□□ 2.4
FAM53A-202ENST00000461064 ARAP1Q96P48 1450 aa30.01■■■□□ 2.39
FAM53A-202ENST00000461064 POLA1P09884 1462 aaPredicted RBP29.98■■■□□ 2.39
FAM53A-202ENST00000461064 HNRNPUL2Q1KMD3 747 aaKnown RBP29.97■■■□□ 2.39
FAM53A-202ENST00000461064 RAD54L2Q9Y4B4 1467 aa29.96■■■□□ 2.39
FAM53A-202ENST00000461064 URB2Q14146 1524 aaKnown RBP29.96■■■□□ 2.39
FAM53A-202ENST00000461064 PDS5BQ9NTI5 1447 aa29.92■■■□□ 2.38
FAM53A-202ENST00000461064 KIF21AQ7Z4S6 1674 aa29.91■■■□□ 2.38
FAM53A-202ENST00000461064 ABCA10Q8WWZ4 1543 aa29.9■■■□□ 2.38
FAM53A-202ENST00000461064 DIEXFQ68CQ4 756 aaKnown RBP29.89■■■□□ 2.38
FAM53A-202ENST00000461064 CARMIL1Q5VZK9 1371 aa29.85■■■□□ 2.37
FAM53A-202ENST00000461064 WDR97A6NE52 1622 aa29.79■■■□□ 2.36
FAM53A-202ENST00000461064 ARHGAP35Q9NRY4 1499 aa29.77■■■□□ 2.36
FAM53A-202ENST00000461064 ZNF316A6NFI3 1004 aaPredicted RBP29.75■■■□□ 2.35
FAM53A-202ENST00000461064 KANK4Q5T7N3 995 aaPredicted RBP29.7■■■□□ 2.34
FAM53A-202ENST00000461064 SCAF1Q9H7N4 1312 aaKnown RBP29.68■■■□□ 2.34
FAM53A-202ENST00000461064 RRBP1Q9P2E9 1410 aaKnown RBP29.65■■■□□ 2.34
FAM53A-202ENST00000461064 ABCA5Q8WWZ7 1642 aa29.64■■■□□ 2.34
FAM53A-202ENST00000461064 CUL7Q14999 1698 aa29.63■■■□□ 2.33
FAM53A-202ENST00000461064 TDRD9Q8NDG6 1382 aaKnown RBP29.6■■■□□ 2.33
FAM53A-202ENST00000461064 TARBP1Q13395 1621 aaKnown RBP29.58■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms