RNA–Protein interactions for RNA: ENST00000567543.5

PML-217, Transcript of promyelocytic leukemia, humanhuman

TSL 1 (best) BASIC

Gene PML, Length 1,404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PML-217ENST00000567543 NISCHQ9Y2I1 1504 aa49.81■■■■■ 5.56
PML-217ENST00000567543 CCDC180Q9P1Z9 1646 aa43.76■■■■■ 4.6
PML-217ENST00000567543 ABCC9O60706 1549 aa42■■■■■ 4.31
PML-217ENST00000567543 ZCCHC6Q5VYS8 1495 aaKnown RBP41.7■■■■■ 4.27
PML-217ENST00000567543 DCAF1Q9Y4B6 1507 aa41.21■■■■■ 4.19
PML-217ENST00000567543 DCAF8L2P0C7V8 631 aa41.15■■■■■ 4.18
PML-217ENST00000567543 MYO15BQ96JP2 1530 aa41.01■■■■■ 4.16
PML-217ENST00000567543 NACADO15069 1562 aa40.92■■■■■ 4.14
PML-217ENST00000567543 RB1CC1Q8TDY2 1594 aa40.71■■■■■ 4.11
PML-217ENST00000567543 SCRIBQ14160 1630 aa40.08■■■■■ 4.01
PML-217ENST00000567543 SHROOM4Q9ULL8 1493 aa39.96■■■■□ 3.99
PML-217ENST00000567543 UNC13AQ9UPW8 1703 aa39.95■■■■□ 3.99
PML-217ENST00000567543 BICRAQ9NZM4 1560 aa39.63■■■■□ 3.94
PML-217ENST00000567543 PABPN1Q86U42 306 aaKnown RBP eCLIP39.45■■■■□ 3.91
PML-217ENST00000567543 CECR2Q9BXF3 1484 aa38.79■■■■□ 3.8
PML-217ENST00000567543 MROH2BQ7Z745 1585 aa38.47■■■■□ 3.75
PML-217ENST00000567543 BAZ1AQ9NRL2 1556 aaPredicted RBP38.46■■■■□ 3.75
PML-217ENST00000567543 SMARCA4P51532 1647 aa38.43■■■■□ 3.74
PML-217ENST00000567543 EIF4G1Q04637 1599 aaKnown RBP38.41■■■■□ 3.74
PML-217ENST00000567543 RSF1Q96T23 1441 aaPredicted RBP38.35■■■■□ 3.73
PML-217ENST00000567543 WIZO95785 1651 aa38.09■■■■□ 3.69
PML-217ENST00000567543 SUPT5HO00267 1087 aaKnown RBP38.05■■■■□ 3.68
PML-217ENST00000567543 PEG3Q9GZU2 1588 aa38.05■■■■□ 3.68
PML-217ENST00000567543 CC2D2AQ9P2K1 1620 aa38.02■■■■□ 3.68
PML-217ENST00000567543 ATAD2BQ9ULI0 1458 aa38■■■■□ 3.67
PML-217ENST00000567543 SMARCA2P51531 1590 aa37.89■■■■□ 3.66
PML-217ENST00000567543 DNAJC5BQ9UF47 199 aa37.86■■■■□ 3.65
PML-217ENST00000567543 NCAPD3P42695 1498 aa37.82■■■■□ 3.64
PML-217ENST00000567543 HMGXB3Q12766 1538 aa37.67■■■■□ 3.62
PML-217ENST00000567543 BAZ1BQ9UIG0 1483 aaKnown RBP37.66■■■■□ 3.62
PML-217ENST00000567543 TOP2AP11388 1531 aaKnown RBP37.66■■■■□ 3.62
PML-217ENST00000567543 CCDC88BA6NC98 1476 aa37.28■■■■□ 3.56
PML-217ENST00000567543 CADPSQ9ULU8 1353 aa36.75■■■■□ 3.47
PML-217ENST00000567543 CFTRP13569 1480 aa36.75■■■■□ 3.47
PML-217ENST00000567543 NESP48681 1621 aa36.69■■■■□ 3.46
PML-217ENST00000567543 LAMC3Q9Y6N6 1575 aa36.59■■■■□ 3.45
PML-217ENST00000567543 PRDM2Q13029 1718 aa36.48■■■■□ 3.43
PML-217ENST00000567543 FANCD2Q9BXW9 1451 aa36.31■■■■□ 3.4
PML-217ENST00000567543 PDS5BQ9NTI5 1447 aa36.28■■■■□ 3.4
PML-217ENST00000567543 ABCC8Q09428 1581 aa36.22■■■■□ 3.39
PML-217ENST00000567543 KIF21AQ7Z4S6 1674 aa36.22■■■■□ 3.39
PML-217ENST00000567543 CHIC1Q5VXU3 224 aa36.16■■■■□ 3.38
PML-217ENST00000567543 CEP164Q9UPV0 1460 aa36.13■■■■□ 3.37
PML-217ENST00000567543 WRNQ14191 1432 aaPredicted RBP eCLIP36.05■■■■□ 3.36
PML-217ENST00000567543 CUX1P39880 1505 aa36■■■■□ 3.35
PML-217ENST00000567543 SYNJ1O43426 1573 aa36■■■■□ 3.35
PML-217ENST00000567543 ERCC6Q03468 1493 aa35.98■■■■□ 3.35
PML-217ENST00000567543 URB2Q14146 1524 aaKnown RBP35.97■■■■□ 3.35
PML-217ENST00000567543 MRC2Q9UBG0 1479 aa35.9■■■■□ 3.34
PML-217ENST00000567543 TOP2BQ02880 1626 aa35.89■■■■□ 3.34
PML-217ENST00000567543 BIVM-ERCC5R4GMW8 1640 aa35.89■■■■□ 3.34
PML-217ENST00000567543 TOPBP1Q92547 1522 aa35.87■■■■□ 3.33
PML-217ENST00000567543 DNMBPQ6XZF7 1577 aa35.87■■■■□ 3.33
PML-217ENST00000567543 THOC2Q8NI27 1593 aaKnown RBP35.87■■■■□ 3.33
PML-217ENST00000567543 TRIM41Q8WV44 630 aa35.83■■■■□ 3.33
PML-217ENST00000567543 WDR62O43379 1518 aa35.79■■■■□ 3.32
PML-217ENST00000567543 FGD5Q6ZNL6 1462 aa35.69■■■■□ 3.3
PML-217ENST00000567543 POLA1P09884 1462 aaPredicted RBP35.65■■■■□ 3.3
PML-217ENST00000567543 CUX2O14529 1486 aa35.55■■■■□ 3.28
PML-217ENST00000567543 RAD54L2Q9Y4B4 1467 aa35.52■■■■□ 3.28
PML-217ENST00000567543 SOGA1O94964 1423 aa35.47■■■■□ 3.27
PML-217ENST00000567543 TARBP1Q13395 1621 aaKnown RBP35.45■■■■□ 3.26
PML-217ENST00000567543 ABCA10Q8WWZ4 1543 aa35.38■■■■□ 3.25
PML-217ENST00000567543 RUSC2Q8N2Y8 1516 aa35.37■■■■□ 3.25
PML-217ENST00000567543 WDR97A6NE52 1622 aa35.37■■■■□ 3.25
PML-217ENST00000567543 IFT140Q96RY7 1462 aa35.35■■■■□ 3.25
PML-217ENST00000567543 ZNF608Q9ULD9 1512 aaPredicted RBP35.23■■■■□ 3.23
PML-217ENST00000567543 TDRD9Q8NDG6 1382 aaKnown RBP35.21■■■■□ 3.23
PML-217ENST00000567543 KIF27Q86VH2 1401 aa35.18■■■■□ 3.22
PML-217ENST00000567543 ABCA5Q8WWZ7 1642 aa35.16■■■■□ 3.22
PML-217ENST00000567543 FAM9AQ8IZU1 332 aaPredicted RBP35.15■■■■□ 3.22
PML-217ENST00000567543 AQRO60306 1485 aaKnown RBP eCLIP35.14■■■■□ 3.221e-6■■■■■ 29.8
PML-217ENST00000567543 EEA1Q15075 1411 aa35.1■■■■□ 3.21
PML-217ENST00000567543 GAPVD1Q14C86 1478 aa35.07■■■■□ 3.21
PML-217ENST00000567543 EIF4G3O43432 1585 aaKnown RBP35.05■■■■□ 3.2
PML-217ENST00000567543 IGF1RP08069 1367 aa35.05■■■■□ 3.2
PML-217ENST00000567543 CSRNP3Q8WYN3 585 aa35.01■■■■□ 3.2
PML-217ENST00000567543 PBRM1Q86U86 1689 aa34.93■■■■□ 3.18
PML-217ENST00000567543 ERICH3Q5RHP9 1530 aa34.93■■■■□ 3.18
PML-217ENST00000567543 GRIN2BQ13224 1484 aa34.91■■■■□ 3.18
PML-217ENST00000567543 PRXQ9BXM0 1461 aa34.86■■■■□ 3.17
PML-217ENST00000567543 CARMIL1Q5VZK9 1371 aa34.79■■■■□ 3.16
PML-217ENST00000567543 SNAPC4Q5SXM2 1469 aa34.77■■■■□ 3.16
PML-217ENST00000567543 CUL7Q14999 1698 aa34.75■■■■□ 3.15
PML-217ENST00000567543 KIF21BO75037 1637 aa34.75■■■■□ 3.15
PML-217ENST00000567543 ADAMTS12P58397 1594 aa34.74■■■■□ 3.15
PML-217ENST00000567543 LOC105371045A0A1W2PR82 267 aa34.72■■■■□ 3.15
PML-217ENST00000567543 RAPGEF2Q9Y4G8 1499 aa34.71■■■■□ 3.15
PML-217ENST00000567543 MAGI1Q96QZ7 1491 aaPredicted RBP34.7■■■■□ 3.15
PML-217ENST00000567543 FHAD1B1AJZ9 1412 aa34.69■■■■□ 3.14
PML-217ENST00000567543 EHMT2Q96KQ7 1210 aa34.63■■■■□ 3.13
PML-217ENST00000567543 GOLGA3Q08378 1498 aa34.59■■■■□ 3.13
PML-217ENST00000567543 SYNJ2O15056 1496 aa34.58■■■■□ 3.13
PML-217ENST00000567543 GRIN2AQ12879 1464 aa34.5■■■■□ 3.11
PML-217ENST00000567543 CHMP7Q8WUX9 453 aaPredicted RBP34.45■■■■□ 3.11
PML-217ENST00000567543 CHD1O14646 1710 aa34.44■■■■□ 3.1
PML-217ENST00000567543 FBLN2P98095 1184 aa34.4■■■■□ 3.1
PML-217ENST00000567543 UBTFP17480 764 aaKnown RBP34.38■■■■□ 3.09
PML-217ENST00000567543 TNIKQ9UKE5 1360 aa34.38■■■■□ 3.09
PML-217ENST00000567543 CEP170Q5SW79 1584 aa34.35■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms