Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.662e-8■■■□□ 18
SND1Q7KZF4 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.532e-8■■■□□ 18
SND1Q7KZF4 SEMA3B-214ENST00000619119 3158 ntTSL 517.65■□□□□ 0.422e-8■■■□□ 18
SND1Q7KZF4 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.262e-8■■■□□ 18
SND1Q7KZF4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21■□□□□ 0.952e-16■■■□□ 18
SND1Q7KZF4 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.96e-7■■■□□ 18
SND1Q7KZF4 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.066e-7■■■□□ 18
SND1Q7KZF4 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.224e-8■■■□□ 18
SND1Q7KZF4 HERPUD1-219ENST00000570273 1425 ntTSL 1 (best)16.06■□□□□ 0.164e-8■■■□□ 18
SND1Q7KZF4 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.014e-8■■■□□ 18
SND1Q7KZF4 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC14.67□□□□□ -0.064e-8■■■□□ 18
SND1Q7KZF4 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC13.96□□□□□ -0.174e-8■■■□□ 18
SND1Q7KZF4 HERPUD1-209ENST00000564678 2199 ntTSL 1 (best)9.02□□□□□ -0.974e-8■■■□□ 18
SND1Q7KZF4 CPN1-202ENST00000441382 669 ntTSL 211.41□□□□□ -0.581e-6■■■□□ 18
SND1Q7KZF4 C2-214ENST00000485690 894 ntTSL 59.58□□□□□ -0.885e-10■■■□□ 18
SND1Q7KZF4 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.631e-7■■■□□ 18
SND1Q7KZF4 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.191e-7■■■□□ 18
SND1Q7KZF4 PIGO-203ENST00000378617 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.34e-6■■■□□ 17.9
SND1Q7KZF4 PIGO-204ENST00000465745 5447 ntTSL 213.14□□□□□ -0.314e-6■■■□□ 17.9
SND1Q7KZF4 PIGO-206ENST00000474436 6655 ntTSL 213.08□□□□□ -0.324e-6■■■□□ 17.9
SND1Q7KZF4 PIGO-201ENST00000298004 2588 ntTSL 1 (best) BASIC12.54□□□□□ -0.44e-6■■■□□ 17.9
SND1Q7KZF4 PIGO-202ENST00000361778 2464 ntTSL 5 BASIC12.53□□□□□ -0.44e-6■■■□□ 17.9
SND1Q7KZF4 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.083e-7■■■□□ 17.9
SND1Q7KZF4 ERO1A-206ENST00000556039 1855 ntTSL 532.22■■■□□ 2.752e-6■■■□□ 17.9
SND1Q7KZF4 ERO1A-203ENST00000554019 2094 ntTSL 530.46■■■□□ 2.472e-6■■■□□ 17.9
SND1Q7KZF4 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC24.3■■□□□ 1.482e-6■■■□□ 17.9
SND1Q7KZF4 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.55■□□□□ 0.725e-7■■■□□ 17.9
SND1Q7KZF4 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.65e-7■■■□□ 17.9
SND1Q7KZF4 SERPING1-211ENST00000531605 579 ntTSL 210.5□□□□□ -0.735e-7■■■□□ 17.9
SND1Q7KZF4 NAGPA-214ENST00000568528 543 nt19.25■□□□□ 0.674e-24■■■□□ 17.9
SND1Q7KZF4 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.015e-8■■■□□ 17.9
SND1Q7KZF4 GPC6-202ENST00000617456 792 ntTSL 3 BASIC8.78□□□□□ -15e-8■■■□□ 17.9
SND1Q7KZF4 REEP5-201ENST00000261482 683 ntTSL 525.48■■□□□ 1.674e-10■■■□□ 17.9
SND1Q7KZF4 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.444e-10■■■□□ 17.9
SND1Q7KZF4 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.997e-46■■■□□ 17.9
SND1Q7KZF4 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.797e-46■■■□□ 17.9
SND1Q7KZF4 REEP5-204ENST00000497856 1779 ntTSL 1 (best)16.06■□□□□ 0.164e-10■■■□□ 17.9
SND1Q7KZF4 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC13.98□□□□□ -0.174e-10■■■□□ 17.9
SND1Q7KZF4 RBP4-203ENST00000371469 814 ntTSL 5 BASIC13.36□□□□□ -0.277e-46■■■□□ 17.9
SND1Q7KZF4 REEP5-206ENST00000511865 1187 ntTSL 212.5□□□□□ -0.414e-10■■■□□ 17.9
SND1Q7KZF4 RBP4-204ENST00000629763 838 ntTSL 5 BASIC11.08□□□□□ -0.647e-46■■■□□ 17.9
SND1Q7KZF4 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.883e-11■■■□□ 17.9
SND1Q7KZF4 CHID1-222ENST00000533059 578 ntTSL 314.39□□□□□ -0.111e-6■■■□□ 17.9
SND1Q7KZF4 TMEM165-206ENST00000508561 756 ntTSL 514.07□□□□□ -0.169e-9■■■□□ 17.9
SND1Q7KZF4 PCYOX1-203ENST00000422380 556 ntTSL 413.5□□□□□ -0.254e-7■■■□□ 17.9
SND1Q7KZF4 TMEM165-210ENST00000514904 1522 ntTSL 210.81□□□□□ -0.689e-9■■■□□ 17.9
SND1Q7KZF4 CBX5-202ENST00000439541 1832 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.759e-9■■■□□ 17.9
SND1Q7KZF4 PCYOX1-205ENST00000451279 648 ntTSL 410.13□□□□□ -0.793e-7■■■□□ 17.9
SND1Q7KZF4 CHID1-221ENST00000533056 752 ntTSL 39.86□□□□□ -0.831e-6■■■□□ 17.9
SND1Q7KZF4 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.29e-9■■■□□ 17.9
SND1Q7KZF4 CBX5-203ENST00000547872 745 ntTSL 26.99□□□□□ -1.299e-9■■■□□ 17.9
SND1Q7KZF4 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.49e-9■■■□□ 17.9
SND1Q7KZF4 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC7.35□□□□□ -1.239e-8■■■□□ 17.9
SND1Q7KZF4 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.38□□□□□ -1.399e-8■■■□□ 17.9
SND1Q7KZF4 EXT2-206ENST00000528159 521 ntTSL 39.78□□□□□ -0.842e-12■■■□□ 17.8
SND1Q7KZF4 SQLE-205ENST00000521232 711 ntTSL 317.58■□□□□ 0.44e-9■■■□□ 17.8
SND1Q7KZF4 HMGCR-208ENST00000509431 421 ntTSL 214.22□□□□□ -0.136e-7■■■□□ 17.8
SND1Q7KZF4 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.17■□□□□ 0.344e-8■■■□□ 17.8
SND1Q7KZF4 M6PR-206ENST00000541507 2198 ntTSL 515.19■□□□□ 0.024e-8■■■□□ 17.8
SND1Q7KZF4 M6PR-201ENST00000000412 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.284e-8■■■□□ 17.8
SND1Q7KZF4 M6PR-209ENST00000543704 616 ntTSL 312.85□□□□□ -0.354e-8■■■□□ 17.8
SND1Q7KZF4 M6PR-208ENST00000543258 561 ntTSL 510.89□□□□□ -0.674e-8■■■□□ 17.8
SND1Q7KZF4 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.081e-6■■■□□ 17.8
SND1Q7KZF4 LGR5-202ENST00000536515 2664 ntTSL 1 (best) BASIC14.47□□□□□ -0.091e-6■■■□□ 17.8
SND1Q7KZF4 LGR5-206ENST00000550851 4095 ntTSL 212.78□□□□□ -0.361e-6■■■□□ 17.8
SND1Q7KZF4 LGR5-203ENST00000540815 2800 ntTSL 1 (best) BASIC12.29□□□□□ -0.441e-6■■■□□ 17.8
SND1Q7KZF4 DHCR24-202ENST00000436604 863 ntTSL 310.34□□□□□ -0.757e-22■■■□□ 17.8
SND1Q7KZF4 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC24.33■■□□□ 1.491e-8■■■□□ 17.8
SND1Q7KZF4 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC23.15■■□□□ 1.31e-8■■■□□ 17.8
SND1Q7KZF4 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC22.67■■□□□ 1.221e-8■■■□□ 17.8
SND1Q7KZF4 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.011e-8■■■□□ 17.8
SND1Q7KZF4 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.25■□□□□ 0.831e-8■■■□□ 17.8
SND1Q7KZF4 SPNS1-206ENST00000564476 890 ntTSL 319.6■□□□□ 0.736e-6■■■□□ 17.8
SND1Q7KZF4 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.18■□□□□ 0.661e-8■■■□□ 17.8
SND1Q7KZF4 SPNS1-208ENST00000566059 1615 ntTSL 518.58■□□□□ 0.561e-8■■■□□ 17.8
SND1Q7KZF4 SPNS1-211ENST00000568829 780 ntTSL 517.17■□□□□ 0.341e-8■■■□□ 17.8
SND1Q7KZF4 MR1-202ENST00000367578 1577 ntTSL 212.09□□□□□ -0.476e-8■■■□□ 17.8
SND1Q7KZF4 MR1-201ENST00000282990 2043 ntTSL 1 (best) BASIC11.76□□□□□ -0.536e-8■■■□□ 17.8
SND1Q7KZF4 MR1-203ENST00000367579 1154 ntTSL 1 (best) BASIC11.65□□□□□ -0.546e-8■■■□□ 17.8
SND1Q7KZF4 MR1-206ENST00000438435 883 ntTSL 39.2□□□□□ -0.946e-8■■■□□ 17.8
SND1Q7KZF4 MR1-205ENST00000434571 7479 ntTSL 5 BASIC9.2□□□□□ -0.946e-8■■■□□ 17.8
SND1Q7KZF4 MR1-208ENST00000614012 7860 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.056e-8■■■□□ 17.8
SND1Q7KZF4 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.056e-8■■■□□ 17.8
SND1Q7KZF4 MR1-209ENST00000617803 7584 ntTSL 5 BASIC7.47□□□□□ -1.216e-8■■■□□ 17.8
SND1Q7KZF4 SERPINF1-205ENST00000571360 478 ntTSL 316.2■□□□□ 0.182e-30■■■□□ 17.8
SND1Q7KZF4 SERPINF1-212ENST00000577053 731 ntTSL 515.69■□□□□ 0.12e-30■■■□□ 17.8
SND1Q7KZF4 SERPINF1-202ENST00000570731 459 ntTSL 512.06□□□□□ -0.482e-30■■■□□ 17.8
SND1Q7KZF4 SSR1-207ENST00000479485 640 ntTSL 27.94□□□□□ -1.141e-7■■■□□ 17.8
SND1Q7KZF4 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.193e-8■■■□□ 17.8
SND1Q7KZF4 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC11.27□□□□□ -0.613e-8■■■□□ 17.8
SND1Q7KZF4 KDELR2-203ENST00000454368 2478 ntTSL 211.16□□□□□ -0.622e-10■■■□□ 17.8
SND1Q7KZF4 KDELR2-205ENST00000463747 376 ntTSL 510.96□□□□□ -0.653e-8■■■□□ 17.8
SND1Q7KZF4 EPRS-204ENST00000477030 1526 ntTSL 1 (best)21.19■□□□□ 0.983e-8■■■□□ 17.8
SND1Q7KZF4 EPRS-206ENST00000609181 2968 ntTSL 1 (best)11.68□□□□□ -0.543e-8■■■□□ 17.8
SND1Q7KZF4 ARG2-204ENST00000557319 627 ntTSL 26.13□□□□□ -1.431e-6■■■□□ 17.8
SND1Q7KZF4 TMEM208-202ENST00000561586 698 ntTSL 215.84■□□□□ 0.135e-7■■■□□ 17.8
SND1Q7KZF4 SUMF2-217ENST00000498777 570 ntTSL 213.6□□□□□ -0.234e-7■■■□□ 17.8
SND1Q7KZF4 CANX-214ENST00000508787 568 ntTSL 35.52□□□□□ -1.532e-21■■■□□ 17.8
SND1Q7KZF4 SLC37A4-206ENST00000525372 1388 ntTSL 1 (best)18.27■□□□□ 0.515e-7■■■□□ 17.8
SND1Q7KZF4 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.515e-7■■■□□ 17.8
Retrieved 100 of 13,567 protein–RNA pairs in 128 ms