RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 AEBP2Q6ZN18 517 aaPredicted RBP20.66■□□□□ 0.9
CBX5-203ENST00000547872 CHIC1Q5VXU3 224 aa20.26■□□□□ 0.83
CBX5-203ENST00000547872 PHF23Q9BUL5 403 aaPredicted RBP17.77■□□□□ 0.44
CBX5-203ENST00000547872 SENP3Q9H4L4 574 aaPredicted RBP17.6■□□□□ 0.41
CBX5-203ENST00000547872 PLPPR3Q6T4P5 718 aa16.5■□□□□ 0.23
CBX5-203ENST00000547872 FOXD1Q16676 465 aa16.28■□□□□ 0.2
CBX5-203ENST00000547872 ADRA2BP18089 450 aa15.69■□□□□ 0.1
CBX5-203ENST00000547872 PPP6R1Q9UPN7 881 aa15.67■□□□□ 0.1
CBX5-203ENST00000547872 PIAS4Q8N2W9 510 aaPredicted RBP15.42■□□□□ 0.06
CBX5-203ENST00000547872 MSH5O43196 834 aa15.06■□□□□ 0
CBX5-203ENST00000547872 PPP4R3CPQ6ZMV5 832 aa14.53□□□□□ -0.08
CBX5-203ENST00000547872 SCAF1Q9H7N4 1312 aaKnown RBP14.42□□□□□ -0.1
CBX5-203ENST00000547872 KCNA4P22459 653 aa14.22□□□□□ -0.13
CBX5-203ENST00000547872 MAPK8IP2Q13387 824 aaPredicted RBP14.21□□□□□ -0.13
CBX5-203ENST00000547872 NCBP3Q53F19 620 aaKnown RBP14.2□□□□□ -0.14
CBX5-203ENST00000547872 CNKSR2Q8WXI2 1034 aa14.13□□□□□ -0.15
CBX5-203ENST00000547872 DMRT2Q9Y5R5 561 aa14.03□□□□□ -0.16
CBX5-203ENST00000547872 NPM3O75607 178 aaKnown RBP13.94□□□□□ -0.18
CBX5-203ENST00000547872 RNF216Q9NWF9 866 aaPredicted RBP13.82□□□□□ -0.2
CBX5-203ENST00000547872 HOXD11P31277 338 aaPredicted RBP13.74□□□□□ -0.21
CBX5-203ENST00000547872 POTEDQ86YR6 584 aa13.61□□□□□ -0.23
CBX5-203ENST00000547872 SLC4A1APQ9BWU0 796 aaKnown RBP13.58□□□□□ -0.24
CBX5-203ENST00000547872 DCAF8L1A6NGE4 600 aa13.5□□□□□ -0.25
CBX5-203ENST00000547872 DNAJC5BQ9UF47 199 aa13.49□□□□□ -0.25
CBX5-203ENST00000547872 EHMT2Q96KQ7 1210 aa13.25□□□□□ -0.29
CBX5-203ENST00000547872 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.16□□□□□ -0.38e-7■■□□□ 12.5
CBX5-203ENST00000547872 SLC4A2P04920 1241 aa13.13□□□□□ -0.31
CBX5-203ENST00000547872 FOXD4L1Q9NU39 408 aa13.11□□□□□ -0.31
CBX5-203ENST00000547872 ZBTB22O15209 634 aa13.05□□□□□ -0.32
CBX5-203ENST00000547872 CSRNP3Q8WYN3 585 aa13.02□□□□□ -0.33
CBX5-203ENST00000547872 MYCNP04198 464 aaPredicted RBP12.91□□□□□ -0.34
CBX5-203ENST00000547872 U3KPZ7 1027 aaPredicted RBP12.9□□□□□ -0.34
CBX5-203ENST00000547872 RNF39Q9H2S5 420 aa12.86□□□□□ -0.35
CBX5-203ENST00000547872 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.81□□□□□ -0.36
CBX5-203ENST00000547872 HNRNPUL2Q1KMD3 747 aaKnown RBP12.81□□□□□ -0.36
CBX5-203ENST00000547872 SAMD1Q6SPF0 538 aaPredicted RBP12.75□□□□□ -0.37
CBX5-203ENST00000547872 C1QBPQ07021 282 aaKnown RBP12.73□□□□□ -0.37
CBX5-203ENST00000547872 APLP2Q06481 763 aa12.69□□□□□ -0.38
CBX5-203ENST00000547872 ATXN8OSP0DMR3 200 aa12.64□□□□□ -0.39
CBX5-203ENST00000547872 CACNB1Q02641 598 aaPredicted RBP12.56□□□□□ -0.4
CBX5-203ENST00000547872 CAPN15O75808 1086 aa12.53□□□□□ -0.4
CBX5-203ENST00000547872 SPINK5Q9NQ38 1064 aaPredicted RBP12.53□□□□□ -0.4
CBX5-203ENST00000547872 ATF5Q9Y2D1 282 aaPredicted RBP12.51□□□□□ -0.41
CBX5-203ENST00000547872 TRHP20396 242 aaPredicted RBP12.48□□□□□ -0.41
CBX5-203ENST00000547872 ZNF219Q9P2Y4 722 aaPredicted RBP12.48□□□□□ -0.41
CBX5-203ENST00000547872 ABCB7O75027 752 aa12.28□□□□□ -0.44
CBX5-203ENST00000547872 DSG3P32926 999 aa12.25□□□□□ -0.45
CBX5-203ENST00000547872 POLA2Q14181 598 aa12.25□□□□□ -0.45
CBX5-203ENST00000547872 ZBTB12Q9Y330 459 aaPredicted RBP12.1□□□□□ -0.47
CBX5-203ENST00000547872 FBLN2P98095 1184 aa12.07□□□□□ -0.48
CBX5-203ENST00000547872 MKRN4PQ13434 485 aaPredicted RBP11.96□□□□□ -0.49
CBX5-203ENST00000547872 OSCARQ8IYS5 282 aa11.84□□□□□ -0.51
CBX5-203ENST00000547872 FKBP8Q14318 412 aa11.83□□□□□ -0.52
CBX5-203ENST00000547872 SPDYE4A6NLX3 237 aa11.77□□□□□ -0.53
CBX5-203ENST00000547872 SPDYE2BA6NHP3 402 aa11.75□□□□□ -0.53
CBX5-203ENST00000547872 SPDYE6P0CI01 402 aa11.75□□□□□ -0.53
CBX5-203ENST00000547872 SPDYE2Q495Y8 402 aa11.75□□□□□ -0.53
CBX5-203ENST00000547872 RBM42Q9BTD8 480 aaKnown RBP11.74□□□□□ -0.53
CBX5-203ENST00000547872 ZNF692Q9BU19 519 aaPredicted RBP11.72□□□□□ -0.53
CBX5-203ENST00000547872 SSUH2Q9Y2M2 353 aa11.63□□□□□ -0.55
CBX5-203ENST00000547872 AKT1S1Q96B36 256 aa11.57□□□□□ -0.56
CBX5-203ENST00000547872 PABPN1Q86U42 306 aaKnown RBP eCLIP11.55□□□□□ -0.56
CBX5-203ENST00000547872 PROM2Q8N271 834 aa11.52□□□□□ -0.57
CBX5-203ENST00000547872 REM2Q8IYK8 340 aaPredicted RBP11.44□□□□□ -0.58
CBX5-203ENST00000547872 FBXO3Q9UK99 471 aa11.42□□□□□ -0.58
CBX5-203ENST00000547872 SPDYE1Q8NFV5 336 aaPredicted RBP11.4□□□□□ -0.58
CBX5-203ENST00000547872 STAG3Q9UJ98 1225 aa11.39□□□□□ -0.59
CBX5-203ENST00000547872 CLEC11AQ9Y240 323 aa11.37□□□□□ -0.59
CBX5-203ENST00000547872 PITPNM1O00562 1244 aa11.32□□□□□ -0.6
CBX5-203ENST00000547872 PRR29P0C7W0 189 aa11.26□□□□□ -0.61
CBX5-203ENST00000547872 VASPP50552 380 aaPredicted RBP11.23□□□□□ -0.61
CBX5-203ENST00000547872 CHRDL2Q6WN34 429 aa11.2□□□□□ -0.62
CBX5-203ENST00000547872 PLCD3Q8N3E9 789 aa11.19□□□□□ -0.62
CBX5-203ENST00000547872 PLEKHG5O94827 1062 aa11.18□□□□□ -0.62
CBX5-203ENST00000547872 MIER1Q8N108 512 aa11.17□□□□□ -0.62
CBX5-203ENST00000547872 FXR2P51116 673 aaKnown RBP eCLIP11.08□□□□□ -0.64
CBX5-203ENST00000547872 KLHL34Q8N239 644 aa11.08□□□□□ -0.64
CBX5-203ENST00000547872 CREBZFQ9NS37 354 aa11.07□□□□□ -0.64
CBX5-203ENST00000547872 PIP4P2Q8N4L2 257 aa11.06□□□□□ -0.64
CBX5-203ENST00000547872 ZBTB47Q9UFB7 747 aaPredicted RBP11.06□□□□□ -0.64
CBX5-203ENST00000547872 PRKAR2AP13861 404 aaKnown RBP11.05□□□□□ -0.64
CBX5-203ENST00000547872 CHADLQ6NUI6 762 aa11.05□□□□□ -0.64
CBX5-203ENST00000547872 IFNLR1Q8IU57 520 aaPredicted RBP11.04□□□□□ -0.64
CBX5-203ENST00000547872 NPM1P06748 294 aaKnown RBP eCLIP10.96□□□□□ -0.65
CBX5-203ENST00000547872 SPOCK2Q92563 424 aa10.96□□□□□ -0.65
CBX5-203ENST00000547872 FARP1Q9Y4F1 1045 aaPredicted RBP10.95□□□□□ -0.66
CBX5-203ENST00000547872 MNX1P50219 401 aaPredicted RBP10.94□□□□□ -0.66
CBX5-203ENST00000547872 AMER1Q5JTC6 1135 aaPredicted RBP10.85□□□□□ -0.67
CBX5-203ENST00000547872 NUBP1P53384 320 aa10.83□□□□□ -0.68
CBX5-203ENST00000547872 FAM212AQ96EL1 285 aa10.82□□□□□ -0.68
CBX5-203ENST00000547872 POTEHQ6S545 545 aa10.81□□□□□ -0.68
CBX5-203ENST00000547872 CIZ1Q9ULV3 898 aaPredicted RBP10.8□□□□□ -0.68
CBX5-203ENST00000547872 PAK3O75914 559 aaPredicted RBP10.79□□□□□ -0.68
CBX5-203ENST00000547872 DCAF8Q5TAQ9 597 aa10.79□□□□□ -0.68
CBX5-203ENST00000547872 RASEFQ8IZ41 740 aa10.79□□□□□ -0.68
CBX5-203ENST00000547872 GSE1Q14687 1217 aa10.78□□□□□ -0.68
CBX5-203ENST00000547872 RTN4Q9NQC3 1192 aaKnown RBP10.77□□□□□ -0.69
CBX5-203ENST00000547872 TSPYL2Q9H2G4 693 aaPredicted RBP10.76□□□□□ -0.69
CBX5-203ENST00000547872 CD44P16070 742 aaKnown RBP10.75□□□□□ -0.69
CBX5-203ENST00000547872 HAX1O00165 279 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms