RNA–Protein interactions for RNA: ENST00000367578.1

MR1-202, Transcript of major histocompatibility complex, class I-related, humanhuman

TSL 2

Gene MR1, Length 1,577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MR1-202ENST00000367578 AEBP2Q6ZN18 517 aaPredicted RBP29.53■■■□□ 2.32
MR1-202ENST00000367578 CHIC1Q5VXU3 224 aa28.5■■■□□ 2.15
MR1-202ENST00000367578 NISCHQ9Y2I1 1504 aa27.96■■■□□ 2.07
MR1-202ENST00000367578 PHF23Q9BUL5 403 aaPredicted RBP25.09■■□□□ 1.61
MR1-202ENST00000367578 SENP3Q9H4L4 574 aaPredicted RBP25■■□□□ 1.59
MR1-202ENST00000367578 CCDC180Q9P1Z9 1646 aa24.8■■□□□ 1.56
MR1-202ENST00000367578 ABCC9O60706 1549 aa24.06■■□□□ 1.44
MR1-202ENST00000367578 FOXD1Q16676 465 aa23.31■■□□□ 1.32
MR1-202ENST00000367578 DCAF8L2P0C7V8 631 aa23.3■■□□□ 1.32
MR1-202ENST00000367578 ZCCHC6Q5VYS8 1495 aaKnown RBP23.29■■□□□ 1.32
MR1-202ENST00000367578 NACADO15069 1562 aa23.28■■□□□ 1.32
MR1-202ENST00000367578 RB1CC1Q8TDY2 1594 aa23.26■■□□□ 1.31
MR1-202ENST00000367578 MYO15BQ96JP2 1530 aa23.21■■□□□ 1.31
MR1-202ENST00000367578 DCAF1Q9Y4B6 1507 aa23.17■■□□□ 1.3
MR1-202ENST00000367578 PLPPR3Q6T4P5 718 aa22.98■■□□□ 1.27
MR1-202ENST00000367578 UNC13AQ9UPW8 1703 aa22.77■■□□□ 1.24
MR1-202ENST00000367578 SCRIBQ14160 1630 aa22.57■■□□□ 1.2
MR1-202ENST00000367578 BICRAQ9NZM4 1560 aa22.54■■□□□ 1.2
MR1-202ENST00000367578 PABPN1Q86U42 306 aaKnown RBP eCLIP22.53■■□□□ 1.2
MR1-202ENST00000367578 SHROOM4Q9ULL8 1493 aa22.33■■□□□ 1.17
MR1-202ENST00000367578 PPP6R1Q9UPN7 881 aa22.25■■□□□ 1.15
MR1-202ENST00000367578 ADRA2BP18089 450 aa22.2■■□□□ 1.14
MR1-202ENST00000367578 DNAJC5BQ9UF47 199 aa21.98■■□□□ 1.11
MR1-202ENST00000367578 EIF4G1Q04637 1599 aaKnown RBP21.92■■□□□ 1.1
MR1-202ENST00000367578 PIAS4Q8N2W9 510 aaPredicted RBP21.89■■□□□ 1.09
MR1-202ENST00000367578 CC2D2AQ9P2K1 1620 aa21.81■■□□□ 1.08
MR1-202ENST00000367578 CECR2Q9BXF3 1484 aa21.73■■□□□ 1.07
MR1-202ENST00000367578 BAZ1AQ9NRL2 1556 aaPredicted RBP21.65■■□□□ 1.06
MR1-202ENST00000367578 SMARCA4P51532 1647 aa21.64■■□□□ 1.05
MR1-202ENST00000367578 MSH5O43196 834 aa21.53■■□□□ 1.04
MR1-202ENST00000367578 MROH2BQ7Z745 1585 aa21.52■■□□□ 1.04
MR1-202ENST00000367578 ATAD2BQ9ULI0 1458 aa21.5■■□□□ 1.03
MR1-202ENST00000367578 NCAPD3P42695 1498 aa21.49■■□□□ 1.03
MR1-202ENST00000367578 SMARCA2P51531 1590 aa21.49■■□□□ 1.03
MR1-202ENST00000367578 PEG3Q9GZU2 1588 aa21.46■■□□□ 1.03
MR1-202ENST00000367578 HMGXB3Q12766 1538 aa21.37■■□□□ 1.01
MR1-202ENST00000367578 RSF1Q96T23 1441 aaPredicted RBP21.35■■□□□ 1.01
MR1-202ENST00000367578 BAZ1BQ9UIG0 1483 aaKnown RBP21.31■■□□□ 1
MR1-202ENST00000367578 WIZO95785 1651 aa21.31■■□□□ 1
MR1-202ENST00000367578 TOP2AP11388 1531 aaKnown RBP21.08■□□□□ 0.97
MR1-202ENST00000367578 SUPT5HO00267 1087 aaKnown RBP20.93■□□□□ 0.94
MR1-202ENST00000367578 LAMC3Q9Y6N6 1575 aa20.89■□□□□ 0.93
MR1-202ENST00000367578 CADPSQ9ULU8 1353 aa20.87■□□□□ 0.93
MR1-202ENST00000367578 NESP48681 1621 aa20.87■□□□□ 0.93
MR1-202ENST00000367578 CCDC88BA6NC98 1476 aa20.85■□□□□ 0.93
MR1-202ENST00000367578 CFTRP13569 1480 aa20.77■□□□□ 0.92
MR1-202ENST00000367578 PDS5BQ9NTI5 1447 aa20.75■□□□□ 0.91
MR1-202ENST00000367578 ERCC6Q03468 1493 aa20.73■□□□□ 0.91
MR1-202ENST00000367578 PRDM2Q13029 1718 aa20.67■□□□□ 0.9
MR1-202ENST00000367578 KIF21AQ7Z4S6 1674 aa20.66■□□□□ 0.9
MR1-202ENST00000367578 FANCD2Q9BXW9 1451 aa20.59■□□□□ 0.89
MR1-202ENST00000367578 CEP164Q9UPV0 1460 aa20.54■□□□□ 0.88
MR1-202ENST00000367578 THOC2Q8NI27 1593 aaKnown RBP20.52■□□□□ 0.88
MR1-202ENST00000367578 CUX2O14529 1486 aa20.49■□□□□ 0.87
MR1-202ENST00000367578 MRC2Q9UBG0 1479 aa20.49■□□□□ 0.87
MR1-202ENST00000367578 WDR62O43379 1518 aa20.41■□□□□ 0.86
MR1-202ENST00000367578 URB2Q14146 1524 aaKnown RBP20.37■□□□□ 0.85
MR1-202ENST00000367578 ABCC8Q09428 1581 aa20.35■□□□□ 0.85
MR1-202ENST00000367578 TOPBP1Q92547 1522 aa20.28■□□□□ 0.84
MR1-202ENST00000367578 DNMBPQ6XZF7 1577 aa20.28■□□□□ 0.84
MR1-202ENST00000367578 PPP4R3CPQ6ZMV5 832 aa20.25■□□□□ 0.83
MR1-202ENST00000367578 MAPK8IP2Q13387 824 aaPredicted RBP20.25■□□□□ 0.83
MR1-202ENST00000367578 SCAF1Q9H7N4 1312 aaKnown RBP20.18■□□□□ 0.82
MR1-202ENST00000367578 CUX1P39880 1505 aa20.18■□□□□ 0.82
MR1-202ENST00000367578 POTEDQ86YR6 584 aa20.18■□□□□ 0.82
MR1-202ENST00000367578 IFT140Q96RY7 1462 aa20.13■□□□□ 0.81
MR1-202ENST00000367578 WRNQ14191 1432 aaPredicted RBP eCLIP20.12■□□□□ 0.81
MR1-202ENST00000367578 POLA1P09884 1462 aaPredicted RBP20.12■□□□□ 0.81
MR1-202ENST00000367578 FGD5Q6ZNL6 1462 aa20.08■□□□□ 0.81
MR1-202ENST00000367578 TOP2BQ02880 1626 aa20.08■□□□□ 0.8
MR1-202ENST00000367578 TARBP1Q13395 1621 aaKnown RBP20.06■□□□□ 0.8
MR1-202ENST00000367578 BIVM-ERCC5R4GMW8 1640 aa20.06■□□□□ 0.8
MR1-202ENST00000367578 SOGA1O94964 1423 aa20.06■□□□□ 0.8
MR1-202ENST00000367578 SYNJ1O43426 1573 aa20.04■□□□□ 0.8
MR1-202ENST00000367578 RAD54L2Q9Y4B4 1467 aa20.02■□□□□ 0.8
MR1-202ENST00000367578 ZNF608Q9ULD9 1512 aaPredicted RBP19.99■□□□□ 0.79
MR1-202ENST00000367578 DMRT2Q9Y5R5 561 aa19.94■□□□□ 0.78
MR1-202ENST00000367578 WDR97A6NE52 1622 aa19.94■□□□□ 0.78
MR1-202ENST00000367578 ABCA10Q8WWZ4 1543 aa19.93■□□□□ 0.78
MR1-202ENST00000367578 AQRO60306 1485 aaKnown RBP eCLIP19.92■□□□□ 0.78
MR1-202ENST00000367578 EIF4G3O43432 1585 aaKnown RBP19.92■□□□□ 0.78
MR1-202ENST00000367578 TDRD9Q8NDG6 1382 aaKnown RBP19.91■□□□□ 0.78
MR1-202ENST00000367578 GAPVD1Q14C86 1478 aa19.83■□□□□ 0.77
MR1-202ENST00000367578 ABCA5Q8WWZ7 1642 aa19.8■□□□□ 0.76
MR1-202ENST00000367578 GRIN2BQ13224 1484 aa19.8■□□□□ 0.76
MR1-202ENST00000367578 TRIM41Q8WV44 630 aa19.78■□□□□ 0.76
MR1-202ENST00000367578 PBRM1Q86U86 1689 aa19.77■□□□□ 0.76
MR1-202ENST00000367578 MAGI1Q96QZ7 1491 aaPredicted RBP19.73■□□□□ 0.75
MR1-202ENST00000367578 CNKSR2Q8WXI2 1034 aa19.72■□□□□ 0.75
MR1-202ENST00000367578 DNAJC5Q9H3Z4 198 aa19.72■□□□□ 0.75
MR1-202ENST00000367578 SNAPC4Q5SXM2 1469 aa19.71■□□□□ 0.75
MR1-202ENST00000367578 OSCARQ8IYS5 282 aa19.71■□□□□ 0.75
MR1-202ENST00000367578 KIF27Q86VH2 1401 aa19.7■□□□□ 0.74
MR1-202ENST00000367578 ERICH3Q5RHP9 1530 aa19.7■□□□□ 0.74
MR1-202ENST00000367578 CHD1O14646 1710 aa19.68■□□□□ 0.74
MR1-202ENST00000367578 FBLN2P98095 1184 aa19.66■□□□□ 0.74
MR1-202ENST00000367578 CHMP7Q8WUX9 453 aaPredicted RBP19.66■□□□□ 0.74
MR1-202ENST00000367578 SYNJ2O15056 1496 aa19.65■□□□□ 0.74
MR1-202ENST00000367578 IGF1RP08069 1367 aa19.63■□□□□ 0.73
MR1-202ENST00000367578 FHAD1B1AJZ9 1412 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms