RNA–Protein interactions for RNA: ENST00000438435.6

MR1-206, Transcript of major histocompatibility complex, class I-related, humanhuman

TSL 3

Gene MR1, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MR1-206ENST00000438435 NISCHQ9Y2I1 1504 aa22.36■■□□□ 1.17
MR1-206ENST00000438435 ABCC9O60706 1549 aa20.45■□□□□ 0.86
MR1-206ENST00000438435 CCDC180Q9P1Z9 1646 aa20.04■□□□□ 0.8
MR1-206ENST00000438435 DNAJC5BQ9UF47 199 aa19.48■□□□□ 0.71
MR1-206ENST00000438435 RB1CC1Q8TDY2 1594 aa19.29■□□□□ 0.68
MR1-206ENST00000438435 DCAF8L2P0C7V8 631 aa19.17■□□□□ 0.66
MR1-206ENST00000438435 NACADO15069 1562 aa19.12■□□□□ 0.65
MR1-206ENST00000438435 PABPN1Q86U42 306 aaKnown RBP eCLIP19.09■□□□□ 0.65
MR1-206ENST00000438435 MYO15BQ96JP2 1530 aa18.78■□□□□ 0.6
MR1-206ENST00000438435 BICRAQ9NZM4 1560 aa18.71■□□□□ 0.59
MR1-206ENST00000438435 UNC13AQ9UPW8 1703 aa18.67■□□□□ 0.58
MR1-206ENST00000438435 SHROOM4Q9ULL8 1493 aa18.47■□□□□ 0.55
MR1-206ENST00000438435 ZCCHC6Q5VYS8 1495 aaKnown RBP18.46■□□□□ 0.54
MR1-206ENST00000438435 CECR2Q9BXF3 1484 aa18.46■□□□□ 0.54
MR1-206ENST00000438435 DCAF1Q9Y4B6 1507 aa18.44■□□□□ 0.54
MR1-206ENST00000438435 CC2D2AQ9P2K1 1620 aa18.38■□□□□ 0.53
MR1-206ENST00000438435 SCRIBQ14160 1630 aa18.31■□□□□ 0.52
MR1-206ENST00000438435 EIF4G1Q04637 1599 aaKnown RBP18.3■□□□□ 0.52
MR1-206ENST00000438435 DNAJC5Q9H3Z4 198 aa18.1■□□□□ 0.49
MR1-206ENST00000438435 CUX2O14529 1486 aa17.72■□□□□ 0.43
MR1-206ENST00000438435 NCAPD3P42695 1498 aa17.71■□□□□ 0.43
MR1-206ENST00000438435 ERCC6Q03468 1493 aa17.69■□□□□ 0.42
MR1-206ENST00000438435 ATAD2BQ9ULI0 1458 aa17.61■□□□□ 0.41
MR1-206ENST00000438435 SMARCA2P51531 1590 aa17.5■□□□□ 0.39
MR1-206ENST00000438435 HMGXB3Q12766 1538 aa17.47■□□□□ 0.39
MR1-206ENST00000438435 NESP48681 1621 aa17.47■□□□□ 0.39
MR1-206ENST00000438435 SMARCA4P51532 1647 aa17.43■□□□□ 0.38
MR1-206ENST00000438435 BAZ1BQ9UIG0 1483 aaKnown RBP17.41■□□□□ 0.38
MR1-206ENST00000438435 BAZ1AQ9NRL2 1556 aaPredicted RBP17.36■□□□□ 0.37
MR1-206ENST00000438435 PDS5BQ9NTI5 1447 aa17.29■□□□□ 0.36
MR1-206ENST00000438435 PEG3Q9GZU2 1588 aa17.28■□□□□ 0.36
MR1-206ENST00000438435 LAMC3Q9Y6N6 1575 aa17.28■□□□□ 0.36
MR1-206ENST00000438435 THOC2Q8NI27 1593 aaKnown RBP17.25■□□□□ 0.35
MR1-206ENST00000438435 MROH2BQ7Z745 1585 aa17.23■□□□□ 0.35
MR1-206ENST00000438435 TRIM41Q8WV44 630 aa17.21■□□□□ 0.35
MR1-206ENST00000438435 CADPSQ9ULU8 1353 aa17.2■□□□□ 0.34
MR1-206ENST00000438435 KIF21AQ7Z4S6 1674 aa17.1■□□□□ 0.33
MR1-206ENST00000438435 MRC2Q9UBG0 1479 aa17.09■□□□□ 0.33
MR1-206ENST00000438435 WDR62O43379 1518 aa17.01■□□□□ 0.31
MR1-206ENST00000438435 OSCARQ8IYS5 282 aa16.99■□□□□ 0.31
MR1-206ENST00000438435 CEP164Q9UPV0 1460 aa16.98■□□□□ 0.31
MR1-206ENST00000438435 FANCD2Q9BXW9 1451 aa16.95■□□□□ 0.3
MR1-206ENST00000438435 WIZO95785 1651 aa16.94■□□□□ 0.3
MR1-206ENST00000438435 CFTRP13569 1480 aa16.9■□□□□ 0.3
MR1-206ENST00000438435 RSF1Q96T23 1441 aaPredicted RBP16.83■□□□□ 0.28
MR1-206ENST00000438435 URB2Q14146 1524 aaKnown RBP16.8■□□□□ 0.28
MR1-206ENST00000438435 TOP2AP11388 1531 aaKnown RBP16.75■□□□□ 0.27
MR1-206ENST00000438435 IFT140Q96RY7 1462 aa16.67■□□□□ 0.26
MR1-206ENST00000438435 ZNF608Q9ULD9 1512 aaPredicted RBP16.65■□□□□ 0.26
MR1-206ENST00000438435 CCDC88BA6NC98 1476 aa16.62■□□□□ 0.25
MR1-206ENST00000438435 CYB5RLQ6IPT4 315 aa16.61■□□□□ 0.25
MR1-206ENST00000438435 RIMBP3CA6NJZ7 1639 aa16.6■□□□□ 0.25
MR1-206ENST00000438435 RIMBP3BA6NNM3 1639 aa16.6■□□□□ 0.25
MR1-206ENST00000438435 RIMBP3Q9UFD9 1639 aa16.6■□□□□ 0.25
MR1-206ENST00000438435 ARHGEF11O15085 1522 aa16.58■□□□□ 0.24
MR1-206ENST00000438435 TOPBP1Q92547 1522 aa16.58■□□□□ 0.24
MR1-206ENST00000438435 ABCC8Q09428 1581 aa16.56■□□□□ 0.24
MR1-206ENST00000438435 FBLN2P98095 1184 aa16.53■□□□□ 0.24
MR1-206ENST00000438435 TRHP20396 242 aaPredicted RBP16.52■□□□□ 0.24
MR1-206ENST00000438435 AQRO60306 1485 aaKnown RBP eCLIP16.51■□□□□ 0.23
MR1-206ENST00000438435 DNMBPQ6XZF7 1577 aa16.46■□□□□ 0.23
MR1-206ENST00000438435 PRDM2Q13029 1718 aa16.45■□□□□ 0.22
MR1-206ENST00000438435 EIF4G3O43432 1585 aaKnown RBP16.45■□□□□ 0.22
MR1-206ENST00000438435 ARAP1Q96P48 1450 aa16.41■□□□□ 0.22
MR1-206ENST00000438435 POLA1P09884 1462 aaPredicted RBP16.4■□□□□ 0.22
MR1-206ENST00000438435 TDRD9Q8NDG6 1382 aaKnown RBP16.39■□□□□ 0.21
MR1-206ENST00000438435 SOGA1O94964 1423 aa16.39■□□□□ 0.21
MR1-206ENST00000438435 TARBP1Q13395 1621 aaKnown RBP16.38■□□□□ 0.21
MR1-206ENST00000438435 RAD54L2Q9Y4B4 1467 aa16.37■□□□□ 0.21
MR1-206ENST00000438435 CHMP7Q8WUX9 453 aaPredicted RBP16.37■□□□□ 0.21
MR1-206ENST00000438435 CHD1O14646 1710 aa16.31■□□□□ 0.2
MR1-206ENST00000438435 SNAPC4Q5SXM2 1469 aa16.29■□□□□ 0.2
MR1-206ENST00000438435 FGD5Q6ZNL6 1462 aa16.26■□□□□ 0.19
MR1-206ENST00000438435 GRIN2BQ13224 1484 aa16.24■□□□□ 0.19
MR1-206ENST00000438435 MAGI1Q96QZ7 1491 aaPredicted RBP16.24■□□□□ 0.19
MR1-206ENST00000438435 AEBP2Q6ZN18 517 aaPredicted RBP16.23■□□□□ 0.19
MR1-206ENST00000438435 CLASP1Q7Z460 1538 aa16.22■□□□□ 0.19
MR1-206ENST00000438435 WDR97A6NE52 1622 aa16.21■□□□□ 0.19
MR1-206ENST00000438435 SYNJ1O43426 1573 aa16.21■□□□□ 0.18
MR1-206ENST00000438435 SYNJ2O15056 1496 aa16.2■□□□□ 0.18
MR1-206ENST00000438435 CUX1P39880 1505 aa16.18■□□□□ 0.18
MR1-206ENST00000438435 GAPVD1Q14C86 1478 aa16.15■□□□□ 0.18
MR1-206ENST00000438435 ABCA10Q8WWZ4 1543 aa16.07■□□□□ 0.16
MR1-206ENST00000438435 WRNQ14191 1432 aaPredicted RBP eCLIP16.01■□□□□ 0.15
MR1-206ENST00000438435 GRIN2AQ12879 1464 aa16■□□□□ 0.15
MR1-206ENST00000438435 SUPT5HO00267 1087 aaKnown RBP15.99■□□□□ 0.15
MR1-206ENST00000438435 PBRM1Q86U86 1689 aa15.98■□□□□ 0.15
MR1-206ENST00000438435 ABCA5Q8WWZ7 1642 aa15.97■□□□□ 0.15
MR1-206ENST00000438435 NUP160Q12769 1436 aa15.97■□□□□ 0.15
MR1-206ENST00000438435 ERCC6L2Q5T890 1561 aa15.96■□□□□ 0.14
MR1-206ENST00000438435 FHAD1B1AJZ9 1412 aa15.95■□□□□ 0.14
MR1-206ENST00000438435 CEP170Q5SW79 1584 aa15.92■□□□□ 0.14
MR1-206ENST00000438435 CHIC1Q5VXU3 224 aa15.92■□□□□ 0.14
MR1-206ENST00000438435 JPH4Q96JJ6 628 aa15.92■□□□□ 0.14
MR1-206ENST00000438435 ADAMTS12P58397 1594 aa15.88■□□□□ 0.13
MR1-206ENST00000438435 PRG4Q92954 1404 aaPredicted RBP15.87■□□□□ 0.13
MR1-206ENST00000438435 NPM1P06748 294 aaKnown RBP eCLIP15.87■□□□□ 0.13
MR1-206ENST00000438435 FAM69CQ0P6D2 419 aa15.85■□□□□ 0.13
MR1-206ENST00000438435 ERICH3Q5RHP9 1530 aa15.84■□□□□ 0.13
MR1-206ENST00000438435 TOP2BQ02880 1626 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms